Genes within 1Mb (chr1:43987353:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000066056 TIE1 686371 eQTL 1.34e-02 -0.091 0.0367 0.0 0.0 0.217
ENSG00000066135 KDM4A 337204 eQTL 1.69e-02 0.0446 0.0186 0.0 0.0 0.217
ENSG00000070785 EIF2B3 -999369 eQTL 1.01e-02 -0.0521 0.0202 0.00184 0.0 0.217
ENSG00000117407 ARTN 54033 eQTL 1.15e-04 0.182 0.0469 0.0 0.0 0.217
ENSG00000117408 IPO13 40403 eQTL 6.23e-19 0.165 0.0181 0.0 0.0 0.217
ENSG00000117410 ATP6V0B 12866 eQTL 1.27e-26 0.115 0.0105 0.0 0.0 0.217
ENSG00000117411 B4GALT2 8410 eQTL 6.43e-03 0.0817 0.0299 0.00147 0.0 0.217
ENSG00000126106 TMEM53 -687128 eQTL 6.56e-03 -0.0847 0.0311 0.0 0.0 0.217
ENSG00000159214 CCDC24 -4006 eQTL 1.57e-61 0.66 0.037 0.0 0.0 0.217
ENSG00000159479 MED8 597545 eQTL 1.35e-02 0.038 0.0154 0.0 0.0 0.217
ENSG00000178028 DMAP1 -226102 eQTL 7.57e-06 -0.107 0.0238 0.0 0.0 0.217
ENSG00000230615 AL139220.2 -43090 eQTL 5.91e-04 0.124 0.0359 0.00227 0.0013 0.217


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000066135 KDM4A 337204 1.6e-06 2.39e-06 2.66e-07 1.36e-06 3.91e-07 6.4e-07 1.26e-06 3.96e-07 1.72e-06 6.28e-07 1.96e-06 1.29e-06 2.68e-06 1.44e-06 3.64e-07 1.1e-06 1.02e-06 1.05e-06 5.56e-07 6.2e-07 7.96e-07 1.98e-06 1.64e-06 5.43e-07 2.95e-06 7.94e-07 1.01e-06 8.66e-07 1.62e-06 1.51e-06 8.43e-07 3.9e-08 2.24e-07 5.4e-07 1.02e-06 4.6e-07 6.1e-07 2.34e-07 4.85e-07 3.24e-07 2.36e-07 2.13e-06 2.91e-07 1.65e-07 1.75e-07 2.97e-07 2.19e-07 1.49e-07 5.02e-08
ENSG00000117407 ARTN 54033 1.42e-05 1.71e-05 2.51e-06 9.48e-06 2.3e-06 6.19e-06 1.78e-05 2.41e-06 1.32e-05 6.3e-06 1.85e-05 7.07e-06 2.38e-05 5.28e-06 4.38e-06 9e-06 7.73e-06 1.07e-05 3.64e-06 2.92e-06 6.66e-06 1.27e-05 1.37e-05 3.37e-06 2.71e-05 4.65e-06 7.48e-06 5.22e-06 1.54e-05 1.1e-05 1.01e-05 1.05e-06 1.19e-06 3.69e-06 6.37e-06 2.68e-06 1.89e-06 2.06e-06 2.23e-06 1.01e-06 9.9e-07 1.92e-05 1.79e-06 2.62e-07 8.02e-07 2.35e-06 2.32e-06 6.06e-07 4.62e-07
ENSG00000117408 IPO13 40403 1.63e-05 2.13e-05 2.91e-06 1.13e-05 2.4e-06 7.23e-06 2.15e-05 2.96e-06 1.64e-05 7.27e-06 2.1e-05 8.05e-06 2.86e-05 6.73e-06 5.1e-06 9.51e-06 8.68e-06 1.25e-05 4.18e-06 3.53e-06 7.18e-06 1.47e-05 1.72e-05 4.2e-06 3e-05 5.12e-06 7.98e-06 6.04e-06 1.77e-05 1.3e-05 1.18e-05 1.12e-06 1.27e-06 3.99e-06 7.28e-06 3.09e-06 1.77e-06 2.33e-06 2.95e-06 1.26e-06 9.78e-07 2.21e-05 2.43e-06 2.73e-07 8.27e-07 2.61e-06 2.84e-06 8.24e-07 4.43e-07
ENSG00000117410 ATP6V0B 12866 2.99e-05 2.99e-05 5.33e-06 1.48e-05 4.08e-06 1.21e-05 3.74e-05 3.8e-06 2.46e-05 1.19e-05 3.16e-05 1.33e-05 4.07e-05 1.13e-05 6.2e-06 1.48e-05 1.44e-05 2.1e-05 7.02e-06 5.38e-06 1.13e-05 2.55e-05 2.67e-05 7.31e-06 3.84e-05 6.4e-06 1.11e-05 9.63e-06 2.85e-05 2.03e-05 1.7e-05 1.58e-06 2.22e-06 6.27e-06 9.74e-06 4.81e-06 2.36e-06 2.96e-06 4.25e-06 2.73e-06 1.59e-06 3.22e-05 2.86e-06 3.24e-07 1.97e-06 3.36e-06 3.8e-06 1.5e-06 1.36e-06
ENSG00000142945 \N -752465 6.8e-07 4.93e-07 9.16e-08 3.58e-07 1.05e-07 1.57e-07 4.25e-07 8.11e-08 2.56e-07 1.39e-07 6.56e-07 2.8e-07 7.02e-07 1.72e-07 1.68e-07 2.14e-07 3.35e-07 2.9e-07 2.13e-07 5.75e-08 1.59e-07 2.96e-07 3.07e-07 4.81e-08 8.09e-07 2.2e-07 2.43e-07 1.77e-07 1.76e-07 4.27e-07 1.93e-07 3.78e-08 3.8e-08 1.36e-07 3.7e-07 3.05e-08 7.74e-08 6.78e-08 6.49e-08 8.03e-08 4.47e-08 3.06e-07 2.28e-08 1.93e-07 9.95e-08 1.46e-08 9.12e-08 1.13e-08 4.69e-08
ENSG00000142959 \N -800817 5.59e-07 3.55e-07 8.55e-08 2.92e-07 1.05e-07 1.44e-07 3.7e-07 7.56e-08 2.12e-07 1.15e-07 4.88e-07 2.11e-07 5.81e-07 1.6e-07 1.45e-07 1.84e-07 2.34e-07 2.66e-07 1.77e-07 5.46e-08 1.35e-07 2.48e-07 2.63e-07 3.27e-08 6.65e-07 2e-07 1.97e-07 1.68e-07 1.48e-07 3.15e-07 1.76e-07 3.55e-08 3.65e-08 1.23e-07 3.42e-07 2.79e-08 6.57e-08 7.92e-08 6.38e-08 8.06e-08 5.96e-08 2.71e-07 3.09e-08 1.96e-07 8.24e-08 1.31e-08 8.21e-08 3.25e-09 4.82e-08
ENSG00000159214 CCDC24 -4006 3.69e-05 3.34e-05 6.39e-06 1.56e-05 5.94e-06 1.45e-05 4.55e-05 4.59e-06 3.18e-05 1.57e-05 3.9e-05 1.78e-05 4.85e-05 1.42e-05 7.12e-06 1.94e-05 1.8e-05 2.59e-05 7.91e-06 6.75e-06 1.56e-05 3.37e-05 3.29e-05 9.09e-06 4.49e-05 8.09e-06 1.44e-05 1.3e-05 3.26e-05 2.57e-05 2.07e-05 1.64e-06 2.57e-06 7.08e-06 1.17e-05 5.85e-06 3.16e-06 3.15e-06 4.75e-06 3.35e-06 1.76e-06 3.84e-05 3.58e-06 3.62e-07 2.49e-06 3.93e-06 4.08e-06 1.6e-06 1.52e-06
ENSG00000178028 DMAP1 -226102 4.04e-06 4.67e-06 4.51e-07 2.04e-06 4.77e-07 8.69e-07 2.38e-06 9.1e-07 2.78e-06 1.35e-06 4.16e-06 2.48e-06 5.6e-06 2.39e-06 9.71e-07 2.38e-06 2.02e-06 2.09e-06 1.42e-06 7.55e-07 1.44e-06 3.54e-06 3.32e-06 1.08e-06 5.46e-06 1.28e-06 1.8e-06 1.84e-06 2.85e-06 3.08e-06 2.04e-06 2.62e-07 4e-07 1.33e-06 2.18e-06 7.08e-07 8.6e-07 4.57e-07 1.32e-06 3.35e-07 3.04e-07 4.49e-06 6.22e-07 1.64e-07 3.14e-07 3.94e-07 8.03e-07 2.15e-07 1.97e-07
ENSG00000230615 AL139220.2 -43090 1.57e-05 2.04e-05 2.64e-06 1.08e-05 2.3e-06 6.96e-06 2.07e-05 2.78e-06 1.56e-05 7.13e-06 2.06e-05 7.98e-06 2.73e-05 6.43e-06 4.98e-06 9.29e-06 8.27e-06 1.22e-05 4.28e-06 3.3e-06 7e-06 1.42e-05 1.64e-05 3.99e-06 2.96e-05 5.11e-06 7.72e-06 5.64e-06 1.73e-05 1.25e-05 1.15e-05 1.03e-06 1.22e-06 4.01e-06 7.03e-06 2.88e-06 1.79e-06 2.35e-06 2.81e-06 1.2e-06 1.04e-06 2.15e-05 2.35e-06 2.73e-07 8.01e-07 2.61e-06 2.62e-06 7.99e-07 4.51e-07