Genes within 1Mb (chr1:43899785:A:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117395 EBNA1BP2 628849 eQTL 4.46e-02 0.0285 0.0141 0.0 0.0 0.248
ENSG00000117407 ARTN -33535 eQTL 2.91e-24 0.44 0.0421 0.00116 0.00238 0.248
ENSG00000117408 IPO13 -47165 eQTL 4.11e-05 -0.0726 0.0176 0.0 0.0 0.248
ENSG00000117410 ATP6V0B -74702 eQTL 4.28e-08 -0.0568 0.0103 0.0 0.0 0.248
ENSG00000126091 ST3GAL3 193961 eQTL 2.87e-03 0.0505 0.0169 0.00232 0.0014 0.248
ENSG00000132768 DPH2 -70215 eQTL 1.83e-04 0.054 0.0144 0.00569 0.0067 0.248
ENSG00000159214 CCDC24 -91574 eQTL 6.20e-28 0.427 0.0377 0.0 0.0 0.248
ENSG00000178028 DMAP1 -313670 eQTL 1.72e-03 0.0708 0.0225 0.0 0.0 0.248
ENSG00000187147 RNF220 -505409 eQTL 3.61e-02 0.0271 0.0129 0.0 0.0 0.248
ENSG00000227533 SLC2A1-AS1 940736 eQTL 1.99e-03 -0.136 0.0438 0.0 0.0 0.248
ENSG00000230615 AL139220.2 -130658 eQTL 1.64e-02 -0.0815 0.0339 0.0 0.0 0.248
ENSG00000236200 KDM4A-AS1 191647 eQTL 2.76e-02 0.0953 0.0432 0.0 0.0 0.248


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117395 EBNA1BP2 628849 3.02e-07 1.53e-07 6.41e-08 2.31e-07 1.05e-07 1.26e-07 2.16e-07 8.11e-08 1.86e-07 1.15e-07 1.66e-07 1.91e-07 2.05e-07 7.64e-08 6.2e-08 1.17e-07 5.42e-08 2.43e-07 1.89e-07 7.26e-08 1.87e-07 2.06e-07 1.64e-07 3.59e-08 1.85e-07 1.86e-07 1.31e-07 1.7e-07 1.37e-07 1.1e-07 1.09e-07 6.7e-08 5.71e-08 9.3e-08 3.57e-08 1.21e-07 3.1e-07 1.24e-07 5.8e-08 7.9e-08 2.95e-08 1.46e-07 6.24e-08 4.11e-08 8.45e-08 8.59e-09 9.26e-08 8.96e-08 2.03e-07
ENSG00000117407 ARTN -33535 0.00014 0.00014 4.77e-05 9.54e-05 8.18e-05 9e-05 0.000212 7.93e-05 0.000231 0.000174 0.000247 0.000142 0.000264 7.25e-05 6.49e-05 0.000185 9.83e-05 0.000219 7.81e-05 6.72e-05 0.000185 0.000215 0.000189 7.19e-05 0.00029 0.000108 0.000154 0.000141 0.000203 7.59e-05 0.000164 3.35e-05 4.77e-05 6.8e-05 8.04e-05 5.24e-05 3.82e-05 4.11e-05 4.65e-05 3.47e-05 2.24e-05 0.000157 2e-05 5.82e-06 3.74e-05 5.34e-05 5.46e-05 4.24e-05 3.24e-05
ENSG00000117408 IPO13 -47165 0.000119 0.000122 4.38e-05 8.07e-05 7.14e-05 7.61e-05 0.000176 7.01e-05 0.000199 0.000155 0.000203 0.000121 0.00022 6e-05 5.16e-05 0.000159 8.42e-05 0.00019 6.5e-05 6.1e-05 0.000164 0.00018 0.000163 6.18e-05 0.000244 9.23e-05 0.000133 0.000127 0.000172 6.09e-05 0.000138 2.94e-05 4.02e-05 6.09e-05 6.96e-05 4.69e-05 3.42e-05 3.54e-05 3.85e-05 2.79e-05 2.16e-05 0.000135 1.74e-05 5.71e-06 3.04e-05 4.67e-05 4.88e-05 3.42e-05 2.63e-05
ENSG00000117410 ATP6V0B -74702 6.95e-05 7.49e-05 3.03e-05 4.57e-05 4.6e-05 4.97e-05 0.000104 5.41e-05 0.000125 0.000105 0.000132 7.67e-05 0.000146 3.72e-05 3.1e-05 0.000104 5.76e-05 0.000117 3.76e-05 4.24e-05 0.000106 0.000123 9.51e-05 3.62e-05 0.000153 5.33e-05 8.85e-05 8.22e-05 0.000109 3.56e-05 8.39e-05 2.21e-05 3.37e-05 3.96e-05 3.99e-05 3.01e-05 2.71e-05 2.77e-05 1.94e-05 1.65e-05 1.59e-05 9.01e-05 1.41e-05 4.34e-06 1.88e-05 3.46e-05 3.69e-05 2.58e-05 2.16e-05
ENSG00000126091 ST3GAL3 193961 4.57e-06 5.12e-06 2e-06 3.81e-06 2.79e-06 4.02e-06 6.72e-06 3.01e-06 7.4e-06 5.14e-06 8.58e-06 5.57e-06 8.28e-06 2.11e-06 2.07e-06 6.69e-06 3.74e-06 6.21e-06 2.95e-06 3.53e-06 6.83e-06 8.03e-06 4.86e-06 2.75e-06 7.97e-06 3.86e-06 4.86e-06 5.28e-06 6.83e-06 4.33e-06 3.88e-06 1.99e-06 2.37e-06 2.63e-06 1.99e-06 3.83e-06 3.19e-06 2.99e-06 1.6e-06 2.03e-06 1.79e-06 6.25e-06 2.55e-06 5.82e-07 2.3e-06 1.94e-06 3.64e-06 3.73e-06 4.01e-06
ENSG00000132768 DPH2 -70215 7.5e-05 8.17e-05 3.23e-05 5.1e-05 5.08e-05 5.43e-05 0.000114 5.76e-05 0.000137 0.000117 0.000145 8.4e-05 0.000158 4.02e-05 3.36e-05 0.000116 6.15e-05 0.000127 4.12e-05 4.66e-05 0.000115 0.000131 0.000106 3.95e-05 0.000165 5.95e-05 9.85e-05 9.27e-05 0.000115 3.96e-05 9.17e-05 2.3e-05 3.51e-05 4.49e-05 4.56e-05 3.34e-05 2.79e-05 2.92e-05 2.18e-05 1.83e-05 1.7e-05 9.52e-05 1.5e-05 4.46e-06 2.14e-05 3.86e-05 3.93e-05 2.64e-05 2.23e-05
ENSG00000142945 \N -840033 2.69e-07 1.19e-07 4.91e-08 1.86e-07 9.8e-08 9.05e-08 1.44e-07 5.43e-08 1.45e-07 5.42e-08 1.62e-07 1.01e-07 1.41e-07 6.21e-08 6.04e-08 7.23e-08 3.93e-08 1.33e-07 7.39e-08 4.78e-08 1.18e-07 1.24e-07 1.34e-07 3.49e-08 1.32e-07 1.26e-07 1.07e-07 1.01e-07 1.09e-07 1.07e-07 9.91e-08 4.4e-08 4.16e-08 8.44e-08 8.76e-08 3.3e-08 7.74e-08 5.8e-08 6.63e-08 3.92e-08 5.3e-08 1.31e-07 3.26e-08 1.88e-08 3.4e-08 1.92e-08 1.19e-07 3.04e-09 6.46e-08
ENSG00000159214 CCDC24 -91574 4.47e-05 4.91e-05 1.97e-05 2.91e-05 3.15e-05 3.69e-05 6.74e-05 3.77e-05 9.08e-05 7.05e-05 9.33e-05 5.41e-05 0.000104 2.39e-05 2.1e-05 7.72e-05 4.22e-05 8.09e-05 2.66e-05 2.84e-05 6.92e-05 9.21e-05 5.97e-05 2.44e-05 0.000103 3.8e-05 6.31e-05 5.87e-05 7.6e-05 2.5e-05 5.67e-05 1.61e-05 2.72e-05 2.34e-05 2.55e-05 2.19e-05 2.08e-05 1.98e-05 1.38e-05 1.17e-05 1.12e-05 6.43e-05 1.06e-05 3.48e-06 1.4e-05 2.17e-05 2.62e-05 2.25e-05 1.87e-05
ENSG00000178028 DMAP1 -313670 1.19e-06 9.82e-07 3.66e-07 1.29e-06 8.74e-07 7.96e-07 1.5e-06 8.37e-07 1.73e-06 7.42e-07 2.08e-06 1.26e-06 2.29e-06 2.7e-07 3.41e-07 1.51e-06 1.07e-06 1.42e-06 1.53e-06 1.45e-06 1.97e-06 1.94e-06 1.09e-06 6.34e-07 2.29e-06 1.22e-06 1.13e-06 1.79e-06 1.63e-06 1.25e-06 7.8e-07 5.55e-07 5.46e-07 5.4e-07 5.3e-07 9.97e-07 1.11e-06 5.41e-07 6.4e-07 3.65e-07 4.52e-07 1.43e-06 4.01e-07 1.76e-07 4.39e-07 3.36e-07 7.1e-07 7.75e-07 1.06e-06