Genes within 1Mb (chr1:43770919:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117400 MPL 433070 eQTL 5.71e-02 0.0454 0.0238 0.00106 0.0 0.417
ENSG00000117407 ARTN -162401 eQTL 2.20e-21 -0.37 0.0381 0.0 0.0 0.417
ENSG00000117408 IPO13 -176031 eQTL 4.05e-01 -0.0133 0.0159 0.00238 0.0 0.417
ENSG00000117410 ATP6V0B -203568 eQTL 8.09e-03 -0.0248 0.00935 0.0 0.0 0.417
ENSG00000117411 B4GALT2 -208024 eQTL 2.13e-02 -0.0583 0.0253 0.0 0.0 0.417
ENSG00000126091 ST3GAL3 65095 eQTL 3.69e-06 -0.0702 0.0151 0.00305 0.00296 0.417
ENSG00000159214 CCDC24 -220440 eQTL 9.45e-76 -0.61 0.0302 0.0 0.0 0.417
ENSG00000159479 MED8 381111 eQTL 3.91e-02 -0.0268 0.013 0.0 0.0 0.417
ENSG00000178922 HYI 316930 eQTL 2.24e-04 -0.0769 0.0208 0.0 0.0 0.417
ENSG00000234694 AL139289.2 412261 eQTL 6.21e-02 0.0768 0.0411 0.00103 0.0 0.417
ENSG00000236200 KDM4A-AS1 62781 eQTL 2.02e-04 -0.144 0.0386 0.00681 0.00552 0.417


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117394 \N 811743 3.14e-07 1.33e-07 4.08e-08 2.2e-07 9.25e-08 8.45e-08 1.6e-07 5.2e-08 1.45e-07 4.74e-08 1.55e-07 8.59e-08 1.53e-07 7.37e-08 5.43e-08 7.17e-08 3.98e-08 1.26e-07 5.97e-08 4.16e-08 1.08e-07 1.24e-07 1.44e-07 2.95e-08 1.37e-07 1.14e-07 1.1e-07 9.65e-08 1.2e-07 1.02e-07 9.7e-08 3.94e-08 3.89e-08 8.72e-08 7.36e-08 3.14e-08 4.95e-08 9.65e-08 6.54e-08 3.71e-08 3.27e-08 1.33e-07 5.39e-08 7.28e-09 5.59e-08 1.65e-08 1.23e-07 3.95e-09 4.79e-08
ENSG00000117407 ARTN -162401 8.33e-06 5.32e-06 6.66e-07 3.18e-06 7.58e-07 1.52e-06 3.49e-06 7.35e-07 3.65e-06 1.94e-06 4.9e-06 1.84e-06 7.09e-06 2.04e-06 1.16e-06 2.07e-06 1.92e-06 2.54e-06 1.46e-06 9.49e-07 1.92e-06 4.87e-06 3.47e-06 1.82e-06 4.56e-06 1.22e-06 2.35e-06 1.78e-06 4.28e-06 3.1e-06 2.72e-06 5.6e-07 5.88e-07 1.87e-06 1.8e-06 9.86e-07 8.38e-07 4.58e-07 1.06e-06 3.45e-07 3.18e-07 5.43e-06 5.44e-07 8.98e-08 3.27e-07 5.87e-07 8.93e-07 2.22e-07 3.24e-07
ENSG00000126091 ST3GAL3 65095 3.32e-05 1.4e-05 1.28e-06 6.74e-06 1.87e-06 5.5e-06 1.23e-05 1.79e-06 9.72e-06 5.36e-06 1.4e-05 5.26e-06 1.85e-05 4.19e-06 3.71e-06 6.62e-06 4.98e-06 7.71e-06 2.61e-06 2.85e-06 5.02e-06 1.16e-05 7.98e-06 3.17e-06 1.42e-05 2.8e-06 5.56e-06 4.62e-06 1.13e-05 8.14e-06 7.73e-06 9.05e-07 1.26e-06 3.01e-06 3.93e-06 1.68e-06 1.18e-06 1.42e-06 2.18e-06 9.86e-07 6.13e-07 1.45e-05 1.49e-06 2.15e-07 7.74e-07 1.66e-06 1.26e-06 7.13e-07 4.54e-07
ENSG00000142945 \N -968899 2.76e-07 1.3e-07 3.56e-08 1.83e-07 9.01e-08 9.9e-08 1.44e-07 5.33e-08 1.41e-07 4.38e-08 1.62e-07 7.78e-08 1.41e-07 6.56e-08 6.12e-08 7.89e-08 4.48e-08 1.14e-07 5.36e-08 4.21e-08 1.04e-07 1.27e-07 1.32e-07 4.16e-08 1.31e-07 1.15e-07 1.06e-07 9.15e-08 1.05e-07 1.11e-07 9.73e-08 3.71e-08 3.3e-08 8.55e-08 8.98e-08 3.94e-08 4.84e-08 9.56e-08 7.52e-08 3.54e-08 2.99e-08 1.33e-07 5.24e-08 1.43e-08 7.79e-08 1.84e-08 1.26e-07 4.2e-09 4.77e-08
ENSG00000159214 CCDC24 -220440 4.54e-06 3.29e-06 2.79e-07 1.93e-06 4.83e-07 7.26e-07 1.52e-06 4.04e-07 1.61e-06 7.65e-07 2.39e-06 1.15e-06 3.5e-06 1.41e-06 9.86e-07 1.01e-06 1.04e-06 1.36e-06 6.25e-07 1.14e-06 6.24e-07 3.02e-06 1.71e-06 9.28e-07 2.41e-06 4.79e-07 1.2e-06 1.44e-06 1.86e-06 1.61e-06 1.49e-06 3.02e-07 3.61e-07 1.2e-06 8.75e-07 7.02e-07 6.72e-07 2.95e-07 8.73e-07 1.88e-07 2.37e-07 3.03e-06 4.65e-07 5.71e-08 2.99e-07 3.27e-07 2.69e-07 2.24e-07 2.14e-07
ENSG00000178922 HYI 316930 1.87e-06 1.24e-06 3.08e-07 1.23e-06 2.48e-07 6.36e-07 1.33e-06 2.62e-07 1.15e-06 3.82e-07 1.52e-06 5.81e-07 2.25e-06 2.89e-07 4.03e-07 4.79e-07 7.73e-07 5.69e-07 5.83e-07 6.86e-07 3.49e-07 1.56e-06 7.79e-07 5.6e-07 1.64e-06 2.68e-07 7.55e-07 7.74e-07 1.28e-06 1.04e-06 5.67e-07 9.54e-08 1.79e-07 7.04e-07 3.98e-07 4.44e-07 4.16e-07 1.24e-07 3.2e-07 9.18e-08 2.95e-08 1.53e-06 3.67e-07 2.63e-08 1.84e-07 1.48e-07 1.58e-07 8.41e-08 5.84e-08