Genes within 1Mb (chr1:43770443:A:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117407 ARTN -162877 eQTL 1.27e-10 0.306 0.0471 0.0 0.0 0.192
ENSG00000117408 IPO13 -176507 eQTL 7.41e-03 -0.0514 0.0192 0.0 0.0 0.192
ENSG00000117410 ATP6V0B -204044 eQTL 2.14e-17 -0.0943 0.0109 0.0 0.0 0.192
ENSG00000126091 ST3GAL3 64619 eQTL 1.38e-07 0.0962 0.0181 0.0 0.00274 0.192
ENSG00000142949 PTPRF 245256 pQTL 2.05e-02 0.0736 0.0317 0.0 0.0 0.194
ENSG00000142949 PTPRF 245256 eQTL 2.26e-04 0.124 0.0336 0.00194 0.00124 0.192
ENSG00000159214 CCDC24 -220916 eQTL 7.65e-07 0.214 0.043 0.0 0.0 0.192
ENSG00000178028 DMAP1 -443012 eQTL 2.84e-03 0.073 0.0244 0.0 0.0 0.192
ENSG00000187147 RNF220 -634751 eQTL 2.05e-02 0.0324 0.0139 0.0 0.0 0.192
ENSG00000227533 SLC2A1-AS1 811394 eQTL 1.69e-02 -0.114 0.0475 0.0 0.0 0.192
ENSG00000229431 AL139289.1 385330 eQTL 3.37e-02 -0.098 0.0461 0.0 0.0 0.192
ENSG00000234694 AL139289.2 411785 eQTL 1.31e-02 -0.123 0.0495 0.0017 0.0 0.192
ENSG00000236200 KDM4A-AS1 62305 eQTL 8.71e-03 0.123 0.0467 0.0 0.0 0.192


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117394 \N 811267 2.76e-07 1.36e-07 5.82e-08 2.05e-07 9.82e-08 9.05e-08 1.67e-07 5.43e-08 1.5e-07 6.08e-08 1.63e-07 1.05e-07 1.59e-07 7.37e-08 5.72e-08 7.97e-08 4.24e-08 1.44e-07 7.12e-08 4.95e-08 1.27e-07 1.25e-07 1.5e-07 2.83e-08 1.68e-07 1.23e-07 1.12e-07 1.06e-07 1.22e-07 1e-07 1.08e-07 3.9e-08 3.68e-08 8.72e-08 4.92e-08 2.68e-08 4.62e-08 8.68e-08 6.58e-08 3.99e-08 5.71e-08 1.48e-07 5.21e-08 7.23e-09 2.64e-08 1.8e-08 1.2e-07 1.93e-09 4.94e-08
ENSG00000117407 ARTN -162877 3.06e-06 3.37e-06 5.59e-07 1.96e-06 8.74e-07 7.88e-07 2.31e-06 8.99e-07 2.63e-06 1.44e-06 3.09e-06 1.72e-06 4.79e-06 1.38e-06 9.02e-07 2.07e-06 1.54e-06 2.12e-06 1.49e-06 1.2e-06 1.81e-06 3.33e-06 3.01e-06 1.66e-06 4.27e-06 1.21e-06 1.75e-06 1.66e-06 3.12e-06 2.57e-06 2.07e-06 4.9e-07 6.07e-07 1.35e-06 1.65e-06 9.24e-07 9.39e-07 4.65e-07 1.23e-06 3.64e-07 2.78e-07 3.92e-06 5.78e-07 1.82e-07 4.13e-07 3.61e-07 8.95e-07 2.62e-07 3.03e-07
ENSG00000117410 ATP6V0B -204044 1.97e-06 2.51e-06 2.7e-07 1.64e-06 4.69e-07 6.96e-07 1.3e-06 5.89e-07 1.69e-06 7.73e-07 1.96e-06 1.43e-06 3.28e-06 8.94e-07 5.03e-07 1.45e-06 9.22e-07 1.57e-06 6.96e-07 1.13e-06 9.06e-07 2.19e-06 1.75e-06 9.38e-07 2.84e-06 1.2e-06 1.22e-06 1.45e-06 1.77e-06 1.64e-06 9.97e-07 3.21e-07 4.45e-07 8.98e-07 9.1e-07 9.27e-07 8.34e-07 4.74e-07 7.29e-07 3.47e-07 1.67e-07 2.92e-06 4.36e-07 1.86e-07 3.22e-07 2.99e-07 4.15e-07 2.31e-07 2.05e-07
ENSG00000117419 \N -584817 3.71e-07 2.5e-07 7.92e-08 2.48e-07 1.07e-07 1.13e-07 2.95e-07 7.12e-08 2.26e-07 1.28e-07 2.38e-07 1.72e-07 3.4e-07 8.42e-08 9.2e-08 1.33e-07 7.3e-08 2.66e-07 9.69e-08 7.26e-08 1.48e-07 2.07e-07 2e-07 5.01e-08 3.27e-07 1.94e-07 1.57e-07 1.7e-07 1.54e-07 1.69e-07 1.43e-07 8.25e-08 5.2e-08 9.98e-08 7.44e-08 5.41e-08 6.95e-08 5.25e-08 4.74e-08 8.16e-08 3.43e-08 2.65e-07 3.53e-08 1.97e-08 7.89e-08 8.07e-09 9.1e-08 0.0 5.54e-08
ENSG00000126091 ST3GAL3 64619 7.78e-06 9.6e-06 1.36e-06 5.06e-06 2.42e-06 4.07e-06 1.02e-05 2.01e-06 9.26e-06 4.99e-06 1.17e-05 5.16e-06 1.39e-05 3.95e-06 2.33e-06 6.47e-06 3.97e-06 7.04e-06 2.54e-06 2.77e-06 5.11e-06 8.97e-06 7.37e-06 3.32e-06 1.31e-05 3.86e-06 4.67e-06 3.97e-06 9.57e-06 8.01e-06 5.1e-06 1.07e-06 1.19e-06 3e-06 3.93e-06 2.86e-06 1.83e-06 1.84e-06 2.18e-06 1.04e-06 9.3e-07 1.23e-05 1.29e-06 2.52e-07 7.6e-07 1.75e-06 1.3e-06 7.32e-07 4.73e-07
ENSG00000142949 PTPRF 245256 1.29e-06 1.4e-06 2.43e-07 1.26e-06 4.46e-07 6.17e-07 1.51e-06 4.54e-07 1.73e-06 6.69e-07 2.1e-06 9.29e-07 2.63e-06 3.31e-07 4.55e-07 1.03e-06 9.57e-07 1.09e-06 5.81e-07 5.06e-07 6.58e-07 1.96e-06 1.14e-06 5.79e-07 2.44e-06 8.11e-07 9.78e-07 9.81e-07 1.62e-06 1.29e-06 7.84e-07 2.49e-07 3.35e-07 5.71e-07 5.64e-07 6.22e-07 7.12e-07 3.42e-07 5.17e-07 2.01e-07 3.57e-07 2.04e-06 2.32e-07 2.07e-07 3.65e-07 2.13e-07 2.27e-07 1.42e-07 2.82e-07
ENSG00000159214 CCDC24 -220916 1.54e-06 2.1e-06 2.99e-07 1.37e-06 4.59e-07 6.4e-07 1.26e-06 4.28e-07 1.75e-06 6.77e-07 1.94e-06 1.26e-06 2.67e-06 5.76e-07 3.34e-07 1.24e-06 1.11e-06 1.32e-06 5.75e-07 7.37e-07 6.36e-07 1.96e-06 1.64e-06 8.41e-07 2.63e-06 1.1e-06 1.15e-06 1.15e-06 1.74e-06 1.47e-06 7.56e-07 2.49e-07 3.71e-07 6.21e-07 8.07e-07 7.08e-07 7.77e-07 3.47e-07 5.97e-07 2.33e-07 3.2e-07 2.77e-06 3.52e-07 1.81e-07 3.98e-07 3.44e-07 3.78e-07 2.52e-07 2.32e-07
ENSG00000178028 DMAP1 -443012 8.15e-07 6.04e-07 1.24e-07 4.08e-07 1.09e-07 2.09e-07 5.31e-07 1.45e-07 5.06e-07 2.43e-07 7.15e-07 3.62e-07 7.71e-07 1.41e-07 2.48e-07 2.84e-07 3.52e-07 4.11e-07 2.65e-07 1.8e-07 2.52e-07 3.95e-07 3.69e-07 1.76e-07 8.62e-07 2.74e-07 3.26e-07 3.18e-07 3.99e-07 5.28e-07 3.1e-07 4.75e-08 5.63e-08 1.4e-07 3.05e-07 1.52e-07 1.23e-07 1.06e-07 6.41e-08 2.17e-08 1.01e-07 6.27e-07 2.92e-08 1.28e-08 1.71e-07 1.37e-08 1.07e-07 2.35e-08 5.81e-08
ENSG00000234694 AL139289.2 411785 9.14e-07 6.99e-07 1.57e-07 4.39e-07 1.11e-07 2.64e-07 6.02e-07 1.78e-07 6.52e-07 2.88e-07 9.39e-07 4.43e-07 9.65e-07 1.54e-07 3.13e-07 3.79e-07 4.87e-07 4.27e-07 2.87e-07 2.27e-07 2.55e-07 5.17e-07 4.13e-07 2.7e-07 1.16e-06 2.64e-07 4.37e-07 3.9e-07 4.9e-07 6.73e-07 3.66e-07 3.51e-08 5.75e-08 1.69e-07 3.55e-07 2.42e-07 1.97e-07 1.14e-07 7.41e-08 8.22e-09 1.2e-07 7.22e-07 4.53e-08 2.66e-08 1.93e-07 2.64e-08 1.13e-07 3.21e-08 5.02e-08