Genes within 1Mb (chr1:43664022:C:T):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000065978 YBX1 981604 sc-eQTL 9.07e-01 0.0206 0.175 0.052 PB L2
ENSG00000066135 KDM4A 13873 sc-eQTL 6.53e-01 -0.11 0.244 0.052 PB L2
ENSG00000066322 ELOVL1 295948 sc-eQTL 8.32e-02 0.448 0.256 0.052 PB L2
ENSG00000117385 P3H1 896938 sc-eQTL 3.66e-01 0.191 0.211 0.052 PB L2
ENSG00000117394 SLC2A1 705154 sc-eQTL 8.64e-01 -0.0427 0.249 0.052 PB L2
ENSG00000117395 EBNA1BP2 393086 sc-eQTL 1.94e-01 0.264 0.202 0.052 PB L2
ENSG00000117408 IPO13 -282928 sc-eQTL 5.90e-01 0.143 0.266 0.052 PB L2
ENSG00000117410 ATP6V0B -310465 sc-eQTL 1.75e-01 0.161 0.118 0.052 PB L2
ENSG00000117411 B4GALT2 -314921 sc-eQTL 5.35e-01 -0.113 0.181 0.052 PB L2
ENSG00000117419 ERI3 -691238 sc-eQTL 8.48e-01 -0.0491 0.255 0.052 PB L2
ENSG00000126091 ST3GAL3 -41802 sc-eQTL 4.54e-01 0.189 0.251 0.052 PB L2
ENSG00000132768 DPH2 -305978 sc-eQTL 1.91e-01 0.345 0.262 0.052 PB L2
ENSG00000159214 CCDC24 -327337 sc-eQTL 3.73e-01 -0.231 0.259 0.052 PB L2
ENSG00000159479 MED8 274214 sc-eQTL 8.23e-01 0.0427 0.19 0.052 PB L2
ENSG00000164008 C1orf50 896773 sc-eQTL 7.64e-03 0.688 0.253 0.052 PB L2
ENSG00000164010 ERMAP 846900 sc-eQTL 3.43e-02 0.565 0.264 0.052 PB L2
ENSG00000164011 ZNF691 817449 sc-eQTL 9.48e-01 -0.014 0.215 0.052 PB L2
ENSG00000177868 SVBP 846625 sc-eQTL 1.10e-01 -0.424 0.264 0.052 PB L2
ENSG00000178028 DMAP1 -549433 sc-eQTL 9.32e-01 0.0247 0.291 0.052 PB L2
ENSG00000178922 HYI 210033 sc-eQTL 1.33e-03 0.611 0.186 0.052 PB L2
ENSG00000187147 RNF220 -741172 sc-eQTL 8.99e-01 0.0309 0.242 0.052 PB L2
ENSG00000198198 SZT2 274140 sc-eQTL 8.85e-01 -0.0367 0.254 0.052 PB L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000065978 YBX1 981604 eQTL 0.0562 -0.0369 0.0193 0.00116 0.0 0.0589
ENSG00000117394 SLC2A1 704846 eQTL 0.0406 0.111 0.054 0.0 0.0 0.0589
ENSG00000117408 IPO13 -282928 eQTL 0.00877 -0.0866 0.033 0.0 0.0 0.0589
ENSG00000117410 ATP6V0B -310465 eQTL 0.0265 0.0431 0.0194 0.0 0.0 0.0589
ENSG00000178922 HYI 210033 eQTL 3.53e-05 0.179 0.043 0.00108 0.0 0.0589
ENSG00000234694 AL139289.2 305364 eQTL 0.0593 0.161 0.0852 0.00116 0.0 0.0589


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000066322 \N 295948 1.26e-06 9.39e-07 3.28e-07 9.74e-07 3.44e-07 4.81e-07 1.58e-06 3.41e-07 1.49e-06 4.7e-07 1.79e-06 7.32e-07 2.12e-06 3.03e-07 5.65e-07 9.19e-07 8.25e-07 7.02e-07 7.73e-07 6.33e-07 6.51e-07 1.56e-06 8.68e-07 6.51e-07 2.26e-06 5.15e-07 9.02e-07 7.99e-07 1.39e-06 1.24e-06 6.96e-07 1.88e-07 1.97e-07 6.78e-07 5.95e-07 4.42e-07 5.1e-07 1.66e-07 3.89e-07 2.94e-07 2.8e-07 1.46e-06 5.94e-08 4.11e-08 2.11e-07 1.27e-07 2.42e-07 6.95e-08 1.14e-07
ENSG00000117395 \N 393086 1.26e-06 8.23e-07 1.85e-07 4.1e-07 1.19e-07 3.39e-07 7.02e-07 2.28e-07 8.29e-07 3.05e-07 1.09e-06 5.51e-07 1.22e-06 2.14e-07 4.01e-07 4.53e-07 6.07e-07 5.02e-07 3.26e-07 2.68e-07 2.26e-07 5.71e-07 5.21e-07 3.12e-07 1.49e-06 2.37e-07 4.97e-07 4.77e-07 6.91e-07 8.4e-07 4.47e-07 3.31e-08 9.36e-08 2.29e-07 3.39e-07 2.59e-07 1.83e-07 1.21e-07 7.42e-08 1.86e-08 2.12e-07 8.45e-07 5.78e-08 1.62e-08 1.91e-07 4.38e-08 1.54e-07 4.41e-08 5.26e-08
ENSG00000117408 IPO13 -282928 1.28e-06 1.03e-06 2.65e-07 1.11e-06 3.58e-07 5.88e-07 1.58e-06 3.98e-07 1.4e-06 5.98e-07 1.89e-06 7.63e-07 2.34e-06 2.87e-07 5.39e-07 9.37e-07 8.89e-07 7.72e-07 8.18e-07 6.56e-07 7.68e-07 1.74e-06 8.92e-07 5.74e-07 2.16e-06 6.42e-07 9.35e-07 9.19e-07 1.46e-06 1.32e-06 7.47e-07 2.09e-07 2.61e-07 6.9e-07 5.21e-07 4.77e-07 6.1e-07 2.38e-07 4.12e-07 2.79e-07 2.58e-07 1.59e-06 9.42e-08 4.22e-08 2.95e-07 1.35e-07 2.23e-07 3.7e-08 1.56e-07
ENSG00000117419 \N -691238 3.62e-07 1.7e-07 6.57e-08 2.27e-07 1.07e-07 8.89e-08 2.4e-07 5.78e-08 1.89e-07 1.05e-07 1.96e-07 1.52e-07 2.45e-07 8.44e-08 6.6e-08 9.35e-08 4.63e-08 2.15e-07 7.29e-08 6.03e-08 1.26e-07 1.76e-07 1.69e-07 3.59e-08 2.36e-07 1.56e-07 1.31e-07 1.42e-07 1.37e-07 1.29e-07 1.26e-07 4.23e-08 3.65e-08 9.52e-08 5.65e-08 3.18e-08 3.91e-08 8.17e-08 6.35e-08 6.55e-08 5.39e-08 1.6e-07 4.17e-08 7.51e-09 3.48e-08 6.68e-09 7.83e-08 2.07e-09 4.94e-08
ENSG00000132768 \N -305978 1.24e-06 9.28e-07 3.58e-07 7.55e-07 3.51e-07 4.77e-07 1.38e-06 3.51e-07 1.42e-06 4.36e-07 1.63e-06 6.43e-07 2.02e-06 2.76e-07 5.35e-07 8.62e-07 8.06e-07 6.45e-07 6.96e-07 6.79e-07 5.66e-07 1.35e-06 8.96e-07 6.37e-07 2.23e-06 4.23e-07 8.36e-07 7.19e-07 1.3e-06 1.22e-06 6.29e-07 1.59e-07 2e-07 6.8e-07 5.63e-07 4.67e-07 5.15e-07 1.58e-07 3.5e-07 3.23e-07 2.88e-07 1.47e-06 5.66e-08 3.36e-08 1.65e-07 1.3e-07 2.14e-07 8.31e-08 1.08e-07
ENSG00000178922 HYI 210033 2.16e-06 2.43e-06 2.77e-07 1.51e-06 4.98e-07 7.23e-07 1.29e-06 5.61e-07 1.68e-06 7.42e-07 1.96e-06 1.48e-06 3.3e-06 9.33e-07 5.5e-07 1.19e-06 9.83e-07 1.55e-06 5.95e-07 8.75e-07 7.75e-07 2.25e-06 1.78e-06 1.02e-06 2.73e-06 1.22e-06 1.19e-06 1.44e-06 1.81e-06 1.67e-06 1.07e-06 2.48e-07 4.76e-07 1.12e-06 9.04e-07 7.27e-07 7.44e-07 3.47e-07 7.23e-07 3.48e-07 1.51e-07 2.79e-06 4.26e-07 1.66e-07 3.5e-07 3.14e-07 4.3e-07 2.63e-07 2.47e-07