Genes within 1Mb (chr1:43547684:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000066135 KDM4A -102465 eQTL 4.11e-04 0.0611 0.0172 0.00823 0.007 0.239
ENSG00000117407 ARTN -385636 eQTL 5.66e-08 -0.237 0.0433 0.0 0.0 0.239
ENSG00000117410 ATP6V0B -426803 eQTL 1.69e-07 0.0537 0.0102 0.0 0.0 0.239
ENSG00000142949 PTPRF 22497 pQTL 2.01e-04 -0.106 0.0285 0.238 0.188 0.239
ENSG00000142949 PTPRF 22497 eQTL 2.01e-02 -0.0718 0.0308 0.0 0.0 0.239
ENSG00000159479 MED8 157876 eQTL 1.28e-03 0.046 0.0142 0.0 0.0 0.239
ENSG00000177868 SVBP 730287 eQTL 3.45e-02 0.0467 0.0221 0.0 0.0 0.239
ENSG00000178922 HYI 93695 eQTL 4.18e-02 0.0468 0.023 0.0 0.0 0.239
ENSG00000227533 SLC2A1-AS1 588635 eQTL 4.41e-02 0.0875 0.0434 0.0 0.0 0.239
ENSG00000234694 AL139289.2 189026 eQTL 1.24e-02 0.113 0.0452 0.00179 0.0 0.239


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000066135 KDM4A -102465 1.23e-05 1.43e-05 3.08e-06 1.17e-05 3.08e-06 7.63e-06 2.17e-05 2.27e-06 1.54e-05 8.72e-06 1.92e-05 7.63e-06 2.95e-05 7.53e-06 4.27e-06 1.03e-05 8.87e-06 1.33e-05 4.65e-06 4.17e-06 7.89e-06 1.44e-05 1.57e-05 5.62e-06 2.63e-05 5.18e-06 7.65e-06 7.73e-06 1.62e-05 1.42e-05 8.68e-06 1.65e-06 1.4e-06 5.34e-06 7.28e-06 3.76e-06 2.37e-06 2.67e-06 3.61e-06 3.57e-06 1.64e-06 2.02e-05 2.48e-06 3.43e-07 1.27e-06 2.69e-06 2.71e-06 8.61e-07 6.33e-07
ENSG00000117407 ARTN -385636 3.91e-06 4.88e-06 6.4e-07 3.8e-06 1.64e-06 1.56e-06 4.58e-06 1.01e-06 4.96e-06 2.5e-06 5.17e-06 2.74e-06 1.02e-05 2.02e-06 1.22e-06 3.83e-06 2.76e-06 3.83e-06 1.47e-06 1.38e-06 2.79e-06 4.87e-06 4.56e-06 1.68e-06 6.48e-06 1.65e-06 2.27e-06 1.65e-06 4.44e-06 4.14e-06 1.94e-06 1.08e-06 5.29e-07 2.63e-06 2e-06 1.32e-06 1.55e-06 3.74e-07 1.42e-06 1.4e-06 6.39e-07 5.71e-06 4.01e-07 1.59e-07 5.95e-07 1.31e-06 8.86e-07 7.51e-07 5.49e-07
ENSG00000117410 ATP6V0B -426803 3.16e-06 4.79e-06 7.5e-07 3.48e-06 1.38e-06 1.69e-06 3.49e-06 8.06e-07 3.5e-06 2.13e-06 4.2e-06 1.84e-06 9.02e-06 1.94e-06 9.75e-07 3.13e-06 1.87e-06 3.18e-06 1.55e-06 1.12e-06 2.93e-06 4.25e-06 3.58e-06 1.39e-06 5.14e-06 1.35e-06 1.77e-06 1.84e-06 4.32e-06 3.77e-06 1.98e-06 9.99e-07 7.92e-07 2.31e-06 2.26e-06 1.13e-06 1.31e-06 4.74e-07 1.37e-06 1.1e-06 4.32e-07 5.27e-06 3.99e-07 1.52e-07 3.58e-07 1.01e-06 6.63e-07 5.21e-07 5.74e-07
ENSG00000142949 PTPRF 22497 2.99e-05 2.96e-05 6.07e-06 1.53e-05 5.58e-06 1.32e-05 4.1e-05 4.2e-06 2.79e-05 1.42e-05 3.47e-05 1.61e-05 4.49e-05 1.3e-05 6.39e-06 1.77e-05 1.61e-05 2.37e-05 7.47e-06 6.57e-06 1.41e-05 2.96e-05 2.94e-05 8.82e-06 4.09e-05 7.42e-06 1.21e-05 1.24e-05 2.98e-05 2.4e-05 1.78e-05 1.64e-06 2.56e-06 7.07e-06 1.12e-05 5.77e-06 3.2e-06 3.19e-06 4.95e-06 3.48e-06 1.76e-06 3.65e-05 3.39e-06 3.66e-07 2.34e-06 3.66e-06 3.97e-06 1.6e-06 1.49e-06
ENSG00000159479 MED8 157876 8.31e-06 1.14e-05 2.45e-06 9.48e-06 2.39e-06 5.69e-06 1.28e-05 2.03e-06 1.05e-05 6.01e-06 1.4e-05 5.85e-06 2.31e-05 4.99e-06 2.54e-06 8.04e-06 6.9e-06 9.74e-06 3.49e-06 3.06e-06 6.81e-06 1.06e-05 1.02e-05 4.21e-06 1.8e-05 4.4e-06 5.21e-06 5.43e-06 1.19e-05 9.8e-06 5.48e-06 1.33e-06 1.23e-06 4.03e-06 5.46e-06 2.85e-06 1.89e-06 1.99e-06 2.81e-06 3.57e-06 1.21e-06 1.48e-05 1.38e-06 2.36e-07 7.77e-07 2.49e-06 1.84e-06 7.25e-07 4.15e-07
ENSG00000178028 \N -665771 1.24e-06 2.37e-06 3.23e-07 2.01e-06 4.75e-07 8.03e-07 1.29e-06 3.81e-07 1.72e-06 6.56e-07 1.99e-06 8.44e-07 3.93e-06 1.29e-06 4.61e-07 1.23e-06 1.32e-06 1.44e-06 8.1e-07 1.16e-06 9.57e-07 1.96e-06 1.71e-06 1e-06 2.65e-06 9.49e-07 1.01e-06 1.35e-06 1.7e-06 1.67e-06 8.13e-07 5.58e-07 3.95e-07 1.42e-06 9.13e-07 9.75e-07 9.21e-07 3.44e-07 1.3e-06 5.97e-07 2.87e-07 2.69e-06 4.13e-07 1.85e-07 3.58e-07 3.93e-07 2.37e-07 2.45e-07 1.92e-07
ENSG00000178922 HYI 93695 1.3e-05 1.51e-05 3.46e-06 1.21e-05 3.22e-06 8.16e-06 2.29e-05 2.44e-06 1.65e-05 9.14e-06 2.04e-05 8e-06 3.06e-05 7.86e-06 4.5e-06 1.06e-05 9.64e-06 1.43e-05 4.82e-06 4.19e-06 8.21e-06 1.58e-05 1.69e-05 5.78e-06 2.75e-05 5.34e-06 7.72e-06 7.92e-06 1.7e-05 1.49e-05 9.59e-06 1.66e-06 1.49e-06 5.45e-06 7.67e-06 4.02e-06 2.54e-06 2.7e-06 3.62e-06 3.56e-06 1.67e-06 2.19e-05 2.55e-06 3.59e-07 1.37e-06 2.75e-06 2.93e-06 1.12e-06 7.87e-07
ENSG00000234694 AL139289.2 189026 7.28e-06 9.74e-06 1.87e-06 8.36e-06 2.58e-06 4.9e-06 1.09e-05 1.69e-06 9.51e-06 5.58e-06 1.24e-05 5.25e-06 2.02e-05 4.2e-06 1.91e-06 6.68e-06 5.99e-06 7.92e-06 3.09e-06 2.77e-06 5.94e-06 9.51e-06 8.72e-06 3.52e-06 1.42e-05 3.72e-06 4.63e-06 4.97e-06 9.94e-06 8.21e-06 4.54e-06 1.26e-06 1.21e-06 3.8e-06 4.83e-06 2.68e-06 1.71e-06 1.91e-06 2.42e-06 3.36e-06 1.05e-06 1.3e-05 1.27e-06 2.01e-07 8.01e-07 2.34e-06 1.72e-06 7.8e-07 4.67e-07