Genes within 1Mb (chr1:43329093:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000117385 P3H1 562009 eQTL 1.93e-02 0.0412 0.0176 0.0 0.0 0.309
ENSG00000117394 SLC2A1 369917 eQTL 2.80e-03 0.083 0.0277 0.0 0.0 0.309
ENSG00000117395 EBNA1BP2 58157 eQTL 2.72e-02 -0.0299 0.0135 0.0 0.0 0.309
ENSG00000117407 ARTN -604227 eQTL 1.22e-02 -0.107 0.0424 0.0 0.0 0.309
ENSG00000117408 IPO13 -617857 eQTL 4.70e-03 0.048 0.0169 0.0 0.0 0.309
ENSG00000117410 ATP6V0B -645394 eQTL 1.20e-03 0.0323 0.00995 0.0 0.0 0.309
ENSG00000127125 PPCS 872976 eQTL 1.86e-04 0.0618 0.0165 0.00196 0.00122 0.309
ENSG00000132768 DPH2 -640907 eQTL 1.72e-03 -0.0433 0.0138 0.0 0.00107 0.309
ENSG00000142949 PTPRF -196094 eQTL 1.94e-02 0.0699 0.0298 0.0 0.0 0.309
ENSG00000159214 CCDC24 -662266 eQTL 1.83e-03 -0.12 0.0383 0.0 0.0 0.309
ENSG00000159479 MED8 -60715 eQTL 1.73e-08 -0.0775 0.0136 0.0 0.0 0.309
ENSG00000177868 SVBP 511696 eQTL 5.12e-02 -0.0417 0.0214 0.00236 0.0 0.309
ENSG00000178028 DMAP1 -884362 eQTL 3.24e-02 -0.0463 0.0216 0.0 0.0 0.309
ENSG00000178922 HYI -124896 eQTL 2.07e-12 -0.155 0.0217 0.0 0.0 0.309
ENSG00000186409 CCDC30 865763 eQTL 2.13e-03 0.0529 0.0172 0.0 0.0 0.309
ENSG00000198815 FOXJ3 993216 eQTL 3.99e-02 0.0327 0.0159 0.0 0.0 0.309
ENSG00000227533 SLC2A1-AS1 370044 eQTL 4.61e-02 0.0839 0.042 0.0 0.0 0.309


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117385 P3H1 562009 2.69e-07 1.19e-07 4.98e-08 1.82e-07 8.83e-08 9.57e-08 1.49e-07 5.33e-08 1.44e-07 4.94e-08 1.57e-07 7.78e-08 1.45e-07 6.56e-08 6.17e-08 7.37e-08 4.48e-08 1.26e-07 6.75e-08 4.42e-08 1.08e-07 1.28e-07 1.39e-07 3.79e-08 1.46e-07 1.14e-07 1.11e-07 9.57e-08 1.12e-07 1.1e-07 9.7e-08 3.68e-08 3.3e-08 8.55e-08 8.87e-08 3.76e-08 4.95e-08 9.68e-08 7.47e-08 3e-08 4.44e-08 1.46e-07 5.08e-08 1.97e-08 6.92e-08 1.84e-08 1.23e-07 4.04e-09 4.99e-08
ENSG00000117410 ATP6V0B -645394 2.64e-07 1.11e-07 4.08e-08 1.79e-07 9.02e-08 9.32e-08 1.38e-07 5.49e-08 1.4e-07 4.57e-08 1.62e-07 7.88e-08 1.33e-07 6.21e-08 5.53e-08 7.5e-08 4.94e-08 1.14e-07 5.75e-08 4.03e-08 1.04e-07 1.26e-07 1.32e-07 4.26e-08 1.32e-07 1.14e-07 1.12e-07 9.15e-08 1.05e-07 1.12e-07 9.91e-08 3.89e-08 2.92e-08 8.65e-08 9.24e-08 4.02e-08 5.03e-08 9.44e-08 7.92e-08 3.07e-08 3.27e-08 1.36e-07 4.19e-08 2.09e-08 7.91e-08 1.66e-08 1.25e-07 4.2e-09 4.9e-08
ENSG00000132768 DPH2 -640907 2.64e-07 1.11e-07 4.08e-08 1.79e-07 9.02e-08 9.32e-08 1.42e-07 5.49e-08 1.4e-07 4.57e-08 1.62e-07 7.88e-08 1.33e-07 6.21e-08 5.84e-08 7.5e-08 4.94e-08 1.14e-07 5.75e-08 4.03e-08 1.04e-07 1.26e-07 1.32e-07 4.26e-08 1.32e-07 1.14e-07 1.12e-07 9.32e-08 1.05e-07 1.12e-07 9.91e-08 3.89e-08 2.92e-08 8.65e-08 9.24e-08 3.99e-08 5.01e-08 9.56e-08 7.92e-08 3.07e-08 3.27e-08 1.33e-07 4.19e-08 2.1e-08 7.91e-08 1.83e-08 1.25e-07 4.2e-09 4.88e-08
ENSG00000159214 CCDC24 -662266 2.61e-07 1.1e-07 3.88e-08 1.78e-07 9.02e-08 9.36e-08 1.38e-07 5.49e-08 1.4e-07 4.4e-08 1.56e-07 8.03e-08 1.33e-07 6.21e-08 5.53e-08 7.5e-08 4.94e-08 1.14e-07 5.82e-08 4.03e-08 1.04e-07 1.27e-07 1.32e-07 4.54e-08 1.33e-07 1.19e-07 1.12e-07 9.15e-08 1.05e-07 1.1e-07 9.73e-08 3.95e-08 2.91e-08 8.82e-08 9.13e-08 4.02e-08 4.84e-08 9.44e-08 8e-08 3.09e-08 3.43e-08 1.36e-07 3.99e-08 2.03e-08 8.03e-08 1.66e-08 1.25e-07 4.26e-09 4.94e-08
ENSG00000159479 MED8 -60715 5.64e-06 7.87e-06 5.86e-07 3.39e-06 1.66e-06 1.6e-06 8.08e-06 1.07e-06 4.55e-06 3.29e-06 7.57e-06 3.34e-06 9.9e-06 1.91e-06 1.03e-06 3.99e-06 1.94e-06 4.01e-06 1.58e-06 1.14e-06 2.75e-06 7.55e-06 4.78e-06 1.39e-06 9e-06 2.15e-06 2.22e-06 1.76e-06 5.92e-06 5.03e-06 3.29e-06 5.93e-07 5.47e-07 1.71e-06 1.99e-06 9.6e-07 9.52e-07 4.58e-07 8.53e-07 4.73e-07 2.08e-07 9.24e-06 3.65e-07 1.79e-07 3.41e-07 1.34e-06 7.75e-07 4.25e-07 3.41e-07
ENSG00000164011 \N 482520 2.76e-07 1.34e-07 6.26e-08 1.83e-07 9.25e-08 9.61e-08 1.67e-07 5.37e-08 1.45e-07 6.4e-08 1.73e-07 8.68e-08 1.69e-07 7.37e-08 6.25e-08 7.49e-08 3.98e-08 1.44e-07 7.29e-08 4.21e-08 1.22e-07 1.26e-07 1.5e-07 3.03e-08 1.68e-07 1.25e-07 1.07e-07 9.92e-08 1.26e-07 1.07e-07 1.07e-07 3.94e-08 3.89e-08 8.56e-08 8.21e-08 3.65e-08 5.7e-08 9.23e-08 6.54e-08 3.77e-08 3.98e-08 1.55e-07 5.22e-08 5.83e-09 5.43e-08 1.8e-08 1.19e-07 3.86e-09 4.91e-08
ENSG00000177868 SVBP 511696 2.74e-07 1.3e-07 5.82e-08 1.86e-07 9.21e-08 9.87e-08 1.61e-07 5.2e-08 1.45e-07 5.67e-08 1.52e-07 8.59e-08 1.53e-07 7.13e-08 5.91e-08 7.53e-08 3.94e-08 1.33e-07 7.09e-08 4.1e-08 1.19e-07 1.24e-07 1.44e-07 3.49e-08 1.63e-07 1.21e-07 1.06e-07 9.74e-08 1.23e-07 1.07e-07 1.06e-07 4.22e-08 3.56e-08 8e-08 8.74e-08 3.95e-08 5.59e-08 9.22e-08 6.56e-08 3.55e-08 4.51e-08 1.59e-07 5.2e-08 1.1e-08 5.59e-08 1.89e-08 1.24e-07 3.92e-09 4.82e-08
ENSG00000178922 HYI -124896 2.02e-06 2.63e-06 3.2e-07 1.48e-06 3.82e-07 6.4e-07 1.87e-06 4.45e-07 1.74e-06 8.34e-07 1.96e-06 1.27e-06 3.49e-06 9.31e-07 6.04e-07 1.19e-06 1.04e-06 1.85e-06 1.04e-06 6.46e-07 6.5e-07 3.05e-06 2.16e-06 7.61e-07 3.6e-06 1.2e-06 1.14e-06 1.35e-06 2.1e-06 1.59e-06 1.31e-06 3e-07 3.95e-07 5.79e-07 8.35e-07 5.32e-07 6.93e-07 3.09e-07 5.01e-07 2.37e-07 3.05e-07 3.93e-06 3.43e-07 1.89e-07 1.86e-07 3.22e-07 2.66e-07 4.79e-08 2.04e-07
ENSG00000186409 CCDC30 865763 2.66e-07 1.08e-07 3.65e-08 1.7e-07 9.91e-08 9.05e-08 1.39e-07 5.21e-08 1.37e-07 4.24e-08 1.63e-07 7.58e-08 1.27e-07 6.07e-08 5.14e-08 7.87e-08 5.12e-08 1.07e-07 5.19e-08 3.59e-08 1.06e-07 1.33e-07 1.29e-07 4.98e-08 1.29e-07 1.13e-07 1.13e-07 8.71e-08 9.97e-08 1.09e-07 9.75e-08 3.72e-08 2.74e-08 8.3e-08 9.56e-08 4.07e-08 4.85e-08 8.91e-08 8.55e-08 3.64e-08 3.35e-08 1.37e-07 4.01e-08 1.1e-08 9.88e-08 1.72e-08 1.37e-07 4.6e-09 4.79e-08