Genes within 1Mb (chr1:42800387:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000065978 YBX1 117969 eQTL 5.81e-03 -0.027 0.00975 0.00218 0.0 0.311
ENSG00000066185 ZMYND12 344134 eQTL 4.76e-02 -0.0679 0.0342 0.0 0.0 0.311
ENSG00000117385 P3H1 33303 eQTL 1.23e-03 -0.0561 0.0173 0.0502 0.00247 0.311
ENSG00000127125 PPCS 344270 eQTL 3.41e-03 -0.0478 0.0163 0.0 0.0 0.311
ENSG00000164010 ERMAP -16735 pQTL 3.20e-06 -0.111 0.0237 0.0275 0.0256 0.312
ENSG00000186409 CCDC30 337057 eQTL 1.99e-10 -0.107 0.0167 0.0 0.0 0.311
ENSG00000228192 AL512353.1 -46035 eQTL 1.06e-04 -0.174 0.0446 0.0104 0.00862 0.311
ENSG00000234694 AL139289.2 -558271 eQTL 1.98e-02 0.101 0.0431 0.00172 0.0 0.311
ENSG00000274386 TMEM269 15380 eQTL 2.97e-02 0.0786 0.0361 0.0 0.0 0.311


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000186409 CCDC30 337057 8.15e-07 8.36e-07 8.83e-08 4.01e-07 1.12e-07 3.36e-07 5.28e-07 1.73e-07 4.19e-07 2.01e-07 7.67e-07 2.49e-07 5.62e-07 1.76e-07 2.07e-07 1.84e-07 6.37e-07 3.82e-07 2.79e-07 5.19e-07 2.3e-07 3.13e-07 3.3e-07 1.13e-07 5.75e-07 2.7e-07 3.16e-07 3.95e-07 3.27e-07 5.36e-07 2.73e-07 2.39e-07 1.27e-07 2.12e-07 3.32e-07 1.48e-07 7.71e-07 1.47e-07 8.61e-08 2.22e-07 4.78e-08 5.09e-07 6.17e-08 1.6e-07 1.6e-07 1.81e-08 8.24e-08 1.26e-08 6.06e-08
ENSG00000198198 \N -589495 2.69e-07 1.33e-07 3.71e-08 2.05e-07 9.16e-08 9.05e-08 1.49e-07 5.43e-08 1.44e-07 4.57e-08 1.54e-07 7.75e-08 1.41e-07 7.13e-08 6.17e-08 7.37e-08 4.01e-08 1.18e-07 6.07e-08 5.46e-08 1.19e-07 1.27e-07 1.39e-07 3.79e-08 1.37e-07 1.14e-07 1.07e-07 1.04e-07 1.08e-07 1.02e-07 9.91e-08 3.9e-08 3.59e-08 8.7e-08 3.46e-08 3.53e-08 1.02e-07 8.72e-08 6.71e-08 3.58e-08 5.42e-08 1.36e-07 5.27e-08 1.57e-07 4.25e-08 1.83e-08 1.21e-07 3.95e-09 4.85e-08
ENSG00000228192 AL512353.1 -46035 1.92e-05 2.43e-05 4.17e-06 1.47e-05 3.82e-06 1.15e-05 3.12e-05 4.28e-06 2.55e-05 1.2e-05 3.16e-05 1.44e-05 3.63e-05 1.22e-05 5.81e-06 1.48e-05 1.22e-05 1.92e-05 5.69e-06 5.95e-06 9.62e-06 2.18e-05 2.19e-05 6.62e-06 3.25e-05 5.97e-06 1.23e-05 1.14e-05 2.07e-05 1.78e-05 1.39e-05 1.68e-06 2.48e-06 5.65e-06 1.06e-05 5.23e-06 3.19e-06 2.89e-06 4.46e-06 3.95e-06 1.76e-06 2.7e-05 3.46e-06 3.62e-07 1.98e-06 3.27e-06 3.43e-06 1.73e-06 1.52e-06
ENSG00000234694 AL139289.2 -558271 2.74e-07 1.5e-07 3.88e-08 2.2e-07 9.24e-08 8.21e-08 1.61e-07 5.53e-08 1.45e-07 4.74e-08 1.52e-07 8.14e-08 1.45e-07 7.37e-08 6.04e-08 7.3e-08 4.18e-08 1.26e-07 6.75e-08 6.03e-08 1.22e-07 1.28e-07 1.45e-07 3.49e-08 1.4e-07 1.25e-07 1.1e-07 1.12e-07 1.12e-07 1.05e-07 9.64e-08 4.93e-08 3.29e-08 9.76e-08 3.02e-08 3.28e-08 1.11e-07 8.89e-08 6.67e-08 2.74e-08 5.34e-08 1.46e-07 3.55e-08 1.74e-07 3.4e-08 1.99e-08 1.22e-07 3.86e-09 4.79e-08
ENSG00000236200 \N -907751 2.6e-07 1.01e-07 3.44e-08 1.78e-07 9.91e-08 9.32e-08 1.39e-07 5.21e-08 1.36e-07 4.23e-08 1.63e-07 7.6e-08 1.23e-07 6.07e-08 4.84e-08 7.87e-08 4.94e-08 1.06e-07 5.2e-08 4.03e-08 1.06e-07 1.31e-07 1.29e-07 4.99e-08 1.32e-07 1.13e-07 1.13e-07 8.7e-08 1.03e-07 1.1e-07 9.5e-08 3.76e-08 2.74e-08 8.25e-08 9.13e-08 3.97e-08 5.22e-08 9.35e-08 8.3e-08 4.55e-08 3.82e-08 1.37e-07 4.01e-08 2.62e-08 8.16e-08 1.78e-08 1.34e-07 4.6e-09 4.74e-08