Genes within 1Mb (chr1:40728961:G:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000066136 NFYC 37272 eQTL 4.65e-03 -0.0255 0.009 0.0 0.0 0.388
ENSG00000117013 KCNQ4 -54826 eQTL 3.42e-04 0.125 0.0348 0.00216 0.00169 0.388
ENSG00000117016 RIMS3 63279 eQTL 6.18e-07 -0.148 0.0295 0.0294 0.0251 0.388
ENSG00000127129 EDN2 -755722 eQTL 4.89e-02 -0.0559 0.0284 0.0 0.0 0.388
ENSG00000131236 CAP1 688728 eQTL 4.25e-02 -0.0182 0.00897 0.0 0.0 0.388
ENSG00000164002 EXO5 220220 eQTL 2.87e-03 -0.0635 0.0212 0.0 0.0 0.388
ENSG00000171793 CTPS1 -250374 eQTL 2.15e-02 0.0429 0.0186 0.0 0.0 0.388
ENSG00000187801 ZFP69B 278854 eQTL 2.56e-02 0.0601 0.0269 0.0 0.0 0.388
ENSG00000187815 ZFP69 251671 eQTL 3.59e-02 0.0438 0.0208 0.0 0.0 0.388
ENSG00000204060 FOXO6 -632961 eQTL 2.12e-02 0.0516 0.0224 0.00218 0.0 0.388
ENSG00000213172 AL031985.1 364195 eQTL 1.25e-02 0.0682 0.0272 0.00121 0.0 0.388
ENSG00000238287 AL603839.3 220300 eQTL 5.25e-08 0.228 0.0415 0.0 0.0 0.388


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117010 \N 197388 2.38e-06 2.64e-06 2.84e-07 1.7e-06 4.46e-07 7.98e-07 1.61e-06 3.83e-07 1.69e-06 6.94e-07 1.96e-06 1.32e-06 3.58e-06 1.36e-06 4.59e-07 9.91e-07 1.13e-06 1.35e-06 5.56e-07 5.67e-07 7.67e-07 1.96e-06 1.79e-06 8.29e-07 3.45e-06 8.38e-07 1.14e-06 8.31e-07 1.72e-06 1.64e-06 9.11e-07 3.05e-07 2.9e-07 8.91e-07 9.17e-07 4.89e-07 7.49e-07 3.63e-07 6.42e-07 2.26e-07 2.56e-07 3e-06 3.51e-07 1.41e-07 3.14e-07 2.46e-07 2.39e-07 3.73e-08 1.35e-07
ENSG00000117016 RIMS3 63279 8.09e-06 9.55e-06 9.68e-07 4.4e-06 1.85e-06 4.02e-06 1e-05 1.32e-06 6.06e-06 4.29e-06 1.03e-05 4.23e-06 1.15e-05 3.91e-06 2.12e-06 5.39e-06 3.65e-06 4.39e-06 2.23e-06 1.98e-06 3.16e-06 7.44e-06 6.78e-06 2.18e-06 1.29e-05 2.43e-06 4.16e-06 1.9e-06 7.34e-06 7.73e-06 4.07e-06 4.69e-07 7.92e-07 2.75e-06 3.49e-06 1.33e-06 1.04e-06 6.8e-07 1.4e-06 8.57e-07 7.52e-07 1.11e-05 9.28e-07 1.49e-07 7.75e-07 9.57e-07 9.9e-07 7.35e-07 4.98e-07
ENSG00000127129 EDN2 -755722 2.95e-07 1.56e-07 5.35e-08 2.2e-07 1.03e-07 8.33e-08 1.99e-07 5.53e-08 1.44e-07 6.4e-08 1.62e-07 1.15e-07 2.05e-07 8.15e-08 5.69e-08 7.23e-08 4.24e-08 1.44e-07 6.92e-08 5.33e-08 1.21e-07 1.25e-07 1.58e-07 3.22e-08 2.09e-07 1.25e-07 1.17e-07 1.01e-07 1.26e-07 1.07e-07 1.07e-07 3.59e-08 3.56e-08 9.76e-08 3.12e-08 3.2e-08 5.7e-08 8.63e-08 6.41e-08 4.19e-08 5.05e-08 1.59e-07 5.12e-08 1.09e-08 2.82e-08 1.89e-08 1.19e-07 1.89e-09 4.9e-08
ENSG00000164002 EXO5 220220 1.89e-06 2.43e-06 2.54e-07 1.41e-06 3.76e-07 6.64e-07 1.31e-06 4.16e-07 1.7e-06 6.98e-07 1.93e-06 1.18e-06 2.84e-06 9.31e-07 3.88e-07 9.52e-07 9.94e-07 1.1e-06 7.08e-07 4.51e-07 7.54e-07 1.97e-06 1.42e-06 5.94e-07 2.61e-06 7.54e-07 1.02e-06 8.64e-07 1.75e-06 1.47e-06 7.58e-07 2.09e-07 1.97e-07 5.66e-07 8.75e-07 4.42e-07 5.58e-07 2.74e-07 5.35e-07 2.1e-07 2.72e-07 2.76e-06 1.66e-07 1.38e-07 2.96e-07 1.98e-07 2.37e-07 8.42e-08 9.51e-08
ENSG00000187801 ZFP69B 278854 1.3e-06 1.36e-06 3.02e-07 1.23e-06 2.79e-07 5.92e-07 1.5e-06 3.38e-07 1.46e-06 4.31e-07 1.84e-06 6.63e-07 2.5e-06 3.1e-07 5.35e-07 8.27e-07 8.37e-07 6.21e-07 6.62e-07 7.04e-07 3.6e-07 1.27e-06 8.53e-07 6.4e-07 2.49e-06 3.63e-07 8.75e-07 5.78e-07 1.39e-06 1.27e-06 6.96e-07 4.99e-08 1.35e-07 6.78e-07 5.28e-07 3.38e-07 3.4e-07 1.25e-07 3.74e-07 2.29e-07 2.75e-07 1.65e-06 5.58e-08 5.67e-08 1.85e-07 9.77e-08 1.9e-07 8.41e-08 5.47e-08
ENSG00000187815 ZFP69 251671 1.36e-06 1.84e-06 3.32e-07 1.28e-06 3.48e-07 6.25e-07 1.38e-06 3.69e-07 1.57e-06 6.18e-07 2.1e-06 8.67e-07 2.72e-06 4.82e-07 5.04e-07 9.33e-07 9.05e-07 7.89e-07 8.21e-07 6.49e-07 4.57e-07 1.7e-06 1.04e-06 5.43e-07 2.45e-06 4.31e-07 9.3e-07 7.59e-07 1.63e-06 1.27e-06 8.11e-07 1.55e-07 2.29e-07 6.11e-07 6.17e-07 4.34e-07 4.77e-07 1.9e-07 4.67e-07 2.94e-07 2.8e-07 2.12e-06 8.26e-08 8.06e-08 1.45e-07 1.22e-07 2.08e-07 8.81e-08 6.51e-08