Genes within 1Mb (chr1:40726129:T:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000066136 NFYC 34440 eQTL 3.29e-03 -0.0265 0.00899 0.0 0.0 0.389
ENSG00000117013 KCNQ4 -57658 eQTL 2.18e-04 0.129 0.0348 0.00342 0.00294 0.389
ENSG00000117016 RIMS3 60447 eQTL 3.59e-07 -0.151 0.0294 0.0465 0.0396 0.389
ENSG00000127129 EDN2 -758554 eQTL 4.58e-02 -0.0567 0.0283 0.0 0.0 0.389
ENSG00000131236 CAP1 685896 eQTL 4.23e-02 -0.0182 0.00896 0.0 0.0 0.389
ENSG00000164002 EXO5 217388 eQTL 3.40e-03 -0.0623 0.0212 0.0 0.0 0.389
ENSG00000171793 CTPS1 -253206 eQTL 2.98e-02 0.0405 0.0186 0.0 0.0 0.389
ENSG00000187801 ZFP69B 276022 eQTL 2.03e-02 0.0624 0.0268 0.0 0.0 0.389
ENSG00000187815 ZFP69 248839 eQTL 3.87e-02 0.0431 0.0208 0.0 0.0 0.389
ENSG00000204060 FOXO6 -635793 eQTL 2.26e-02 0.0511 0.0224 0.0022 0.0 0.389
ENSG00000213172 AL031985.1 361363 eQTL 9.21e-03 0.071 0.0272 0.00141 0.0 0.389
ENSG00000238287 AL603839.3 217468 eQTL 6.51e-08 0.226 0.0415 0.0 0.0 0.389


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117016 RIMS3 60447 1.69e-05 2.04e-05 6.4e-06 8.26e-06 2.6e-06 5.72e-06 2.03e-05 2.19e-06 1.53e-05 7.59e-06 2e-05 7.21e-06 2.66e-05 7.21e-06 5.36e-06 9.44e-06 9.72e-06 1.21e-05 4.22e-06 3.25e-06 7.77e-06 1.65e-05 1.67e-05 4.43e-06 2.97e-05 5.23e-06 7.96e-06 6.34e-06 1.69e-05 1.38e-05 1.12e-05 1.08e-06 1.25e-06 3.85e-06 6.76e-06 2.85e-06 1.77e-06 2.39e-06 2.46e-06 1.89e-06 9.34e-07 2.7e-05 2.81e-06 3.18e-07 1.85e-06 2.48e-06 1.87e-06 1.16e-06 5.8e-07
ENSG00000127129 EDN2 -758554 2.67e-07 1.35e-07 6.99e-08 2.28e-07 8.83e-08 9.91e-08 1.67e-07 5.33e-08 1.45e-07 4.57e-08 1.54e-07 8.68e-08 1.52e-07 8.13e-08 5.36e-08 7.17e-08 3.98e-08 1.33e-07 5.82e-08 4.07e-08 1.21e-07 1.28e-07 1.44e-07 4.05e-08 1.5e-07 1.16e-07 1.07e-07 9.61e-08 1.2e-07 1.07e-07 1.07e-07 3.71e-08 3.26e-08 9.52e-08 5.65e-08 3.24e-08 5.02e-08 9.23e-08 6.54e-08 3.03e-08 4.76e-08 1.46e-07 5.22e-08 1.76e-08 5.7e-08 1.65e-08 1.23e-07 3.92e-09 5.04e-08
ENSG00000164002 EXO5 217388 3.2e-06 3.22e-06 1.29e-06 1.94e-06 4.73e-07 7.92e-07 2.25e-06 4.23e-07 1.79e-06 7.23e-07 2.45e-06 1.42e-06 3.48e-06 1.24e-06 1.37e-06 1.24e-06 1.19e-06 2.12e-06 8.1e-07 7.22e-07 1.16e-06 3.03e-06 2.46e-06 9.61e-07 3.74e-06 1.12e-06 1.28e-06 1.54e-06 2.07e-06 1.65e-06 2e-06 2.81e-07 3.23e-07 1.22e-06 1.76e-06 9.23e-07 7.5e-07 4.21e-07 1.12e-06 2.42e-07 3.53e-07 3.87e-06 4.62e-07 1.89e-07 3.39e-07 3.21e-07 2.19e-07 2.64e-07 1.71e-07
ENSG00000187801 ZFP69B 276022 1.4e-06 1.53e-06 8.34e-07 1.42e-06 2.98e-07 6.06e-07 1.41e-06 3.45e-07 1.44e-06 3.71e-07 1.85e-06 7.43e-07 2.46e-06 7.96e-07 5.5e-07 8.02e-07 9.23e-07 9.05e-07 8.34e-07 6.91e-07 7.55e-07 1.81e-06 1.11e-06 6.54e-07 2.49e-06 4.33e-07 9.28e-07 8.64e-07 1.62e-06 1.24e-06 7.63e-07 3.77e-08 1.79e-07 5.61e-07 8.99e-07 7.27e-07 5.32e-07 3.65e-07 4.67e-07 9.74e-09 2.17e-07 1.95e-06 3.57e-07 1.49e-07 1.54e-07 3.19e-07 1.47e-07 8.37e-08 5.55e-08
ENSG00000187815 ZFP69 248839 1.94e-06 2.51e-06 6.5e-07 1.8e-06 3.89e-07 6.48e-07 1.31e-06 3.41e-07 1.7e-06 6.14e-07 1.99e-06 1.01e-06 2.69e-06 1.43e-06 9.62e-07 9.45e-07 1.05e-06 1.16e-06 5.34e-07 5.73e-07 6.35e-07 1.92e-06 1.63e-06 5.81e-07 2.51e-06 7.64e-07 1.05e-06 1.01e-06 1.73e-06 1.27e-06 1.16e-06 1.72e-07 2.08e-07 8.91e-07 1.27e-06 9.87e-07 6.79e-07 3.71e-07 4.96e-07 2.42e-07 2.73e-07 2.69e-06 4.93e-07 2.07e-07 3e-07 2.94e-07 1.9e-07 8.15e-08 8.21e-08
ENSG00000213172 AL031985.1 361363 1.25e-06 9.03e-07 2.51e-07 9.74e-07 9.16e-08 3.18e-07 9.92e-07 1.09e-07 8.32e-07 2.37e-07 1.07e-06 5.22e-07 1.28e-06 2.76e-07 5.23e-07 2.69e-07 5.56e-07 5.12e-07 3.06e-07 1.73e-07 2.72e-07 5.76e-07 5.77e-07 1.91e-07 1.54e-06 2.74e-07 4.83e-07 3.95e-07 7.69e-07 6.98e-07 5.2e-07 8.02e-08 5.42e-08 4.51e-07 5.93e-07 4.49e-07 1.01e-07 1.5e-07 7.56e-08 7.28e-08 4.67e-08 1.12e-06 6.94e-08 5.72e-08 1.48e-07 1.24e-07 1.03e-07 1.79e-08 4.82e-08