Genes within 1Mb (chr1:40622689:A:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116981 NT5C1A 950651 pQTL 4.78e-02 0.0968 0.0489 0.0 0.0 0.0177
ENSG00000116990 MYCL 720433 eQTL 7.88e-02 0.115 0.0654 0.00108 0.0 0.0167
ENSG00000131236 CAP1 582456 eQTL 2.67e-02 -0.0792 0.0357 0.00139 0.0 0.0167
ENSG00000131238 PPT1 524962 eQTL 4.50e-05 -0.468 0.114 0.0 0.0 0.0167
ENSG00000164002 EXO5 113948 eQTL 1.96e-04 0.315 0.0843 0.0 0.0 0.0167
ENSG00000171793 CTPS1 -356646 eQTL 5.27e-03 0.207 0.074 0.0 0.0 0.0167
ENSG00000187801 ZFP69B 172582 eQTL 3.76e-02 0.223 0.107 0.0 0.0 0.0167
ENSG00000198754 OXCT2 851341 eQTL 4.02e-02 0.262 0.128 0.0 0.0 0.0167
ENSG00000238287 AL603839.3 114028 eQTL 2.19e-03 -0.513 0.167 0.0 0.0 0.0167


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000084070 \N 277839 1.32e-06 9.83e-07 3.31e-07 7.39e-07 3.2e-07 4.7e-07 1.34e-06 3.31e-07 1.38e-06 4.19e-07 1.56e-06 6.36e-07 2.02e-06 2.9e-07 5.79e-07 8.02e-07 8.37e-07 6.45e-07 7.25e-07 6.83e-07 4.99e-07 1.27e-06 9.28e-07 6.51e-07 2.11e-06 4.28e-07 7.6e-07 7.81e-07 1.29e-06 1.25e-06 6.18e-07 1.82e-07 2.15e-07 6.8e-07 5.41e-07 4.75e-07 5.12e-07 1.65e-07 3.6e-07 2.5e-07 2.72e-07 1.47e-06 5.73e-08 5.67e-08 1.65e-07 1.24e-07 2.14e-07 8.8e-08 1.12e-07
ENSG00000131238 PPT1 524962 5.14e-07 2.56e-07 7.76e-08 2.53e-07 1.11e-07 1.25e-07 3.42e-07 8.11e-08 2.38e-07 1.39e-07 2.98e-07 2.04e-07 4.11e-07 8.26e-08 9.12e-08 1.26e-07 9.3e-08 2.87e-07 9.19e-08 7.26e-08 1.35e-07 2.24e-07 2.2e-07 6.52e-08 3.7e-07 2e-07 1.48e-07 1.68e-07 1.87e-07 2.01e-07 1.78e-07 5.54e-08 4.96e-08 1.02e-07 1.29e-07 5.14e-08 6.48e-08 5.8e-08 4.9e-08 8.3e-08 3.6e-08 2.6e-07 3.2e-08 1.14e-08 7.26e-08 8.24e-09 9.12e-08 0.0 4.59e-08
ENSG00000164002 EXO5 113948 4.46e-06 4.67e-06 9.13e-07 2.42e-06 1.32e-06 1.35e-06 4.08e-06 9.97e-07 4.53e-06 2.13e-06 4.96e-06 3.36e-06 7.38e-06 2.19e-06 1.45e-06 2.98e-06 2e-06 3.32e-06 1.41e-06 1.09e-06 2.91e-06 4.6e-06 3.67e-06 1.43e-06 5.46e-06 1.72e-06 2.62e-06 1.84e-06 4.28e-06 4.14e-06 2.53e-06 5.26e-07 4.91e-07 1.47e-06 2.03e-06 9.21e-07 9.44e-07 4.24e-07 9.42e-07 4.27e-07 5.68e-07 5.43e-06 4.34e-07 1.65e-07 6.11e-07 5.87e-07 9.33e-07 4.11e-07 3.29e-07
ENSG00000198754 OXCT2 851341 2.67e-07 1.3e-07 4.69e-08 1.81e-07 9.24e-08 9.9e-08 1.61e-07 5.48e-08 1.45e-07 5.42e-08 1.55e-07 9.19e-08 1.52e-07 6.76e-08 5.91e-08 7.36e-08 4.09e-08 1.33e-07 5.75e-08 4.23e-08 1.19e-07 1.27e-07 1.44e-07 3.03e-08 1.5e-07 1.25e-07 1.07e-07 9.74e-08 1.16e-07 1.07e-07 1.02e-07 3.08e-08 3.66e-08 8e-08 6.67e-08 3.49e-08 5.31e-08 9.36e-08 6.37e-08 3.92e-08 5.14e-08 1.33e-07 5.22e-08 1.26e-08 4.67e-08 1.84e-08 1.22e-07 3.81e-09 4.88e-08
ENSG00000230638 \N -919380 2.74e-07 1.25e-07 4.08e-08 1.82e-07 9.25e-08 9.8e-08 1.49e-07 5.4e-08 1.45e-07 4.94e-08 1.57e-07 8.68e-08 1.45e-07 6.56e-08 6.02e-08 7.3e-08 3.93e-08 1.27e-07 5.82e-08 4.04e-08 1.08e-07 1.28e-07 1.39e-07 3.23e-08 1.46e-07 1.14e-07 1.07e-07 9.65e-08 1.09e-07 1.07e-07 9.7e-08 3.65e-08 3.56e-08 8.44e-08 7.66e-08 3.95e-08 5.11e-08 9.25e-08 6.54e-08 3.71e-08 4.36e-08 1.35e-07 5.08e-08 1.61e-08 5.15e-08 1.99e-08 1.21e-07 3.89e-09 4.94e-08
ENSG00000284719 \N 823267 2.76e-07 1.27e-07 5.14e-08 1.82e-07 9.79e-08 9.91e-08 1.61e-07 5.53e-08 1.45e-07 5.67e-08 1.52e-07 1.01e-07 1.53e-07 7.13e-08 6.12e-08 7.49e-08 4.01e-08 1.4e-07 5.97e-08 4.21e-08 1.21e-07 1.24e-07 1.45e-07 2.64e-08 1.55e-07 1.25e-07 1.07e-07 9.74e-08 1.2e-07 1.07e-07 1.02e-07 2.9e-08 3.96e-08 8.11e-08 5.99e-08 3.53e-08 5.22e-08 8.93e-08 6.63e-08 4.47e-08 5.45e-08 1.4e-07 5.2e-08 1.13e-08 3.84e-08 1.86e-08 1.19e-07 3.8e-09 5.02e-08