Genes within 1Mb (chr1:40464696:C:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000010803 SCMH1 -777420 eQTL 3.30e-02 -0.03 0.014 0.0 0.0 0.372
ENSG00000043514 TRIT1 581185 eQTL 2.35e-02 0.0441 0.0194 0.0 0.0 0.372
ENSG00000049089 COL9A2 147410 pQTL 4.27e-02 0.0643 0.0317 0.0 0.0 0.37
ENSG00000116990 MYCL 562440 eQTL 4.51e-02 -0.0334 0.0167 0.00115 0.0 0.372
ENSG00000131238 PPT1 366969 eQTL 1.13e-02 0.0742 0.0292 0.0 0.0 0.372
ENSG00000164002 EXO5 -44045 eQTL 4.98e-09 -0.125 0.0212 0.0 0.0 0.372
ENSG00000187801 ZFP69B 14589 eQTL 7.51e-04 -0.0918 0.0272 0.0 0.0 0.372
ENSG00000238287 AL603839.3 -43965 eQTL 1.53e-08 0.24 0.042 0.0 0.0 0.372
ENSG00000260920 AL031985.3 377 eQTL 9.43e-07 -0.121 0.0244 0.00166 0.0 0.372
ENSG00000284719 AL033527.5 665274 eQTL 1.59e-02 -0.0968 0.0401 0.0 0.0 0.372


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000131238 PPT1 366969 1.31e-06 9e-07 2.77e-07 4.19e-07 1.11e-07 4.11e-07 8.7e-07 3.3e-07 1.14e-06 3.85e-07 1.16e-06 5.81e-07 1.23e-06 2.14e-07 4.39e-07 5.75e-07 7.47e-07 5.27e-07 3.77e-07 6.11e-07 3.35e-07 8.66e-07 6.33e-07 4.55e-07 1.57e-06 2.99e-07 6.37e-07 4.98e-07 7.61e-07 9.08e-07 4.71e-07 2.06e-07 1.37e-07 2.17e-07 3.29e-07 2.99e-07 3.67e-07 1.46e-07 1.71e-07 4.12e-08 2.98e-07 9.59e-07 6.94e-08 4.16e-08 1.93e-07 7.22e-08 2.34e-07 5.39e-08 1.23e-07
ENSG00000164002 EXO5 -44045 1.5e-05 1.81e-05 3.3e-06 1.15e-05 3.23e-06 8.4e-06 2.48e-05 3.72e-06 1.87e-05 9.47e-06 2.33e-05 9.35e-06 3.03e-05 6.86e-06 5.16e-06 1.03e-05 8.74e-06 1.6e-05 4.67e-06 4.99e-06 8.57e-06 1.79e-05 1.77e-05 5.66e-06 2.77e-05 5.47e-06 8.33e-06 8.02e-06 1.93e-05 1.49e-05 1.25e-05 1.61e-06 1.73e-06 4.93e-06 8.27e-06 4.2e-06 2.05e-06 2.84e-06 3.31e-06 2.38e-06 1.66e-06 2.02e-05 2.64e-06 3.62e-07 1.95e-06 2.68e-06 3.43e-06 1.5e-06 1.36e-06
ENSG00000198754 \N 693348 2.77e-07 1.42e-07 6.26e-08 2.15e-07 1.01e-07 8.33e-08 1.99e-07 5.68e-08 1.54e-07 8.53e-08 1.62e-07 1.31e-07 1.71e-07 7.64e-08 5.69e-08 7.98e-08 4.45e-08 1.56e-07 7.18e-08 5.48e-08 1.18e-07 1.42e-07 1.62e-07 3.07e-08 1.85e-07 1.39e-07 1.19e-07 1.04e-07 1.31e-07 1.07e-07 1.09e-07 5.01e-08 3.21e-08 8.72e-08 3.52e-08 2.74e-08 3.7e-08 7.63e-08 6.21e-08 4.24e-08 4.36e-08 1.46e-07 3.99e-08 1.08e-08 3.32e-08 1.71e-08 7.61e-08 0.0 4.97e-08
ENSG00000260920 AL031985.3 377 0.000142 0.000132 3.44e-05 6.84e-05 3.92e-05 6.32e-05 0.000174 3.65e-05 0.000145 9.75e-05 0.000204 8.33e-05 0.000215 6.61e-05 3.84e-05 0.000117 7.71e-05 0.000132 5.07e-05 5.7e-05 9.57e-05 0.000154 0.00014 7.01e-05 0.00021 5.57e-05 8.75e-05 7.45e-05 0.000142 0.000134 0.000109 2.1e-05 2.89e-05 5.13e-05 5.54e-05 4.51e-05 2.92e-05 2.77e-05 4.16e-05 1.83e-05 1.97e-05 0.000157 1.92e-05 5.15e-06 2.54e-05 3.41e-05 2.27e-05 1.67e-05 1.16e-05