Genes within 1Mb (chr1:40343432:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000043514 TRIT1 459921 eQTL 4.79e-02 -0.0382 0.0193 0.0 0.0 0.404
ENSG00000049089 COL9A2 26146 eQTL 1.17e-02 0.0565 0.0224 0.00163 0.0 0.404
ENSG00000084072 PPIE 651250 pQTL 3.01e-02 0.07 0.0323 0.00133 0.0 0.408
ENSG00000084072 PPIE 651250 eQTL 2.60e-02 -0.0544 0.0244 0.0 0.0 0.404
ENSG00000090621 PABPC4 766642 eQTL 1.27e-03 -0.0319 0.00986 0.0 0.0 0.404
ENSG00000164002 EXO5 -165309 eQTL 1.01e-02 0.0551 0.0214 0.0 0.0 0.404
ENSG00000171793 CTPS1 -635903 eQTL 2.62e-02 0.0417 0.0187 0.0 0.0 0.404
ENSG00000187801 ZFP69B -106675 eQTL 1.46e-02 0.066 0.027 0.0 0.0 0.404
ENSG00000198754 OXCT2 572084 eQTL 1.17e-02 0.0812 0.0321 0.0 0.0 0.404
ENSG00000228477 AL663070.1 380752 eQTL 1.48e-02 0.0625 0.0256 0.00205 0.0 0.404
ENSG00000238287 AL603839.3 -165229 eQTL 4.58e-02 -0.0845 0.0423 0.0 0.0 0.404
ENSG00000259943 AL050341.2 85465 eQTL 1.63e-03 0.0621 0.0196 0.0 0.0 0.404
ENSG00000281207 SLFNL1-AS1 -671158 eQTL 1.76e-02 0.0593 0.0249 0.0 0.0 0.404


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000084072 PPIE 651250 3.71e-07 1.78e-07 6.57e-08 2.35e-07 1.1e-07 1.08e-07 2.63e-07 6.2e-08 1.86e-07 1.11e-07 1.86e-07 1.46e-07 2.45e-07 8.44e-08 6.27e-08 9.48e-08 4.63e-08 2.04e-07 7.36e-08 5.61e-08 1.27e-07 1.9e-07 1.73e-07 4.27e-08 2.48e-07 1.51e-07 1.29e-07 1.36e-07 1.34e-07 1.39e-07 1.26e-07 4.43e-08 4.37e-08 9.72e-08 6.35e-08 3.24e-08 4.54e-08 7.68e-08 6.35e-08 5.56e-08 6.28e-08 1.68e-07 3.18e-08 1.54e-08 4.36e-08 9.86e-09 8.21e-08 0.0 4.83e-08
ENSG00000090621 PABPC4 766642 3.02e-07 1.42e-07 5.82e-08 2.09e-07 1.03e-07 8.37e-08 1.9e-07 5.62e-08 1.5e-07 7.6e-08 1.59e-07 1.15e-07 1.79e-07 7.95e-08 5.94e-08 7.89e-08 4.18e-08 1.56e-07 6.92e-08 4.95e-08 1.27e-07 1.39e-07 1.62e-07 3.22e-08 1.85e-07 1.26e-07 1.17e-07 1.06e-07 1.31e-07 1.07e-07 1.06e-07 3.66e-08 3.59e-08 9.52e-08 3.12e-08 2.95e-08 5.74e-08 8.37e-08 6.58e-08 3.82e-08 5.34e-08 1.52e-07 4.7e-08 1.43e-08 3.32e-08 1.19e-08 8.61e-08 2e-09 4.83e-08
ENSG00000259943 AL050341.2 85465 5.59e-06 5.79e-06 6.4e-07 3.4e-06 1.5e-06 1.68e-06 7.6e-06 1.24e-06 4.67e-06 3.17e-06 7.56e-06 2.94e-06 9.42e-06 2.07e-06 9.59e-07 3.78e-06 2e-06 3.87e-06 1.43e-06 1.44e-06 2.84e-06 6.37e-06 4.76e-06 1.93e-06 9.05e-06 2.16e-06 2.72e-06 1.71e-06 5.3e-06 5.18e-06 2.93e-06 4.34e-07 5.55e-07 2.15e-06 2.03e-06 1.16e-06 1.06e-06 4.51e-07 8.1e-07 5.03e-07 6.37e-07 8.15e-06 6.82e-07 1.82e-07 7.68e-07 1.07e-06 1.06e-06 7.35e-07 5.29e-07
ENSG00000260920 \N -120887 4.29e-06 4.65e-06 7.61e-07 2.43e-06 1.27e-06 1.39e-06 3.38e-06 1.01e-06 4.22e-06 2.3e-06 4.38e-06 3.3e-06 7.22e-06 2.04e-06 1.4e-06 2.68e-06 1.87e-06 2.76e-06 1.46e-06 9.15e-07 2.49e-06 4.53e-06 3.38e-06 1.69e-06 5.16e-06 1.34e-06 2.43e-06 1.67e-06 4.18e-06 3.62e-06 2.19e-06 5.43e-07 7.33e-07 1.76e-06 2.08e-06 9.08e-07 9.23e-07 4.91e-07 1.3e-06 3.47e-07 2.79e-07 5.54e-06 4.34e-07 1.86e-07 3.58e-07 4.99e-07 8.07e-07 2.26e-07 3.52e-07