|
Gene ID
|
Gene Symbol
|
TSS Distance
|
Category
|
P-value
|
Effect Size
|
Effect Size (se)
|
MAF
|
Cell type
|
Cluster resolution
|
|---|
|
Gene ID
|
Gene Symbol
|
TSS Distance
|
Category
|
P-value
|
Effect Size
|
Effect Size (se)
|
MAF
|
Cell type
|
Cluster resolution
|
|---|---|---|---|---|---|---|---|---|---|
| ENSG00000043514 | TRIT1 | 236651 | sc-eQTL | 5.38e-01 | -0.117 | 0.19 | 0.05 | CD4_CTL | L2 |
| ENSG00000049089 | COL9A2 | -197651 | sc-eQTL | 6.73e-01 | -0.0615 | 0.146 | 0.05 | CD4_CTL | L2 |
| ENSG00000066136 | NFYC | -571486 | sc-eQTL | 6.83e-01 | 0.0821 | 0.201 | 0.05 | CD4_CTL | L2 |
| ENSG00000084070 | SMAP2 | -224688 | sc-eQTL | 3.79e-01 | -0.114 | 0.13 | 0.05 | CD4_CTL | L2 |
| ENSG00000084072 | PPIE | 427980 | sc-eQTL | 6.79e-01 | -0.0823 | 0.199 | 0.05 | CD4_CTL | L2 |
| ENSG00000084073 | ZMPSTE24 | -138074 | sc-eQTL | 8.09e-01 | -0.0482 | 0.199 | 0.05 | CD4_CTL | L2 |
| ENSG00000090621 | PABPC4 | 543372 | sc-eQTL | 3.13e-01 | -0.186 | 0.184 | 0.05 | CD4_CTL | L2 |
| ENSG00000116983 | HPCAL4 | 428677 | sc-eQTL | 5.76e-01 | -0.0969 | 0.173 | 0.05 | CD4_CTL | L2 |
| ENSG00000117000 | RLF | -41225 | sc-eQTL | 7.57e-01 | -0.059 | 0.191 | 0.05 | CD4_CTL | L2 |
| ENSG00000117010 | ZNF684 | -411411 | sc-eQTL | 8.18e-01 | 0.0414 | 0.18 | 0.05 | CD4_CTL | L2 |
| ENSG00000131236 | CAP1 | 79929 | sc-eQTL | 6.39e-03 | 0.349 | 0.126 | 0.05 | CD4_CTL | L2 |
| ENSG00000131238 | PPT1 | 22435 | sc-eQTL | 3.38e-01 | 0.192 | 0.2 | 0.05 | CD4_CTL | L2 |
| ENSG00000164002 | EXO5 | -388579 | sc-eQTL | 5.48e-01 | 0.113 | 0.188 | 0.05 | CD4_CTL | L2 |
| ENSG00000171793 | CTPS1 | -859526 | sc-eQTL | 7.24e-01 | -0.0651 | 0.184 | 0.05 | CD4_CTL | L2 |
| ENSG00000179862 | CITED4 | -742201 | sc-eQTL | 8.46e-01 | 0.0306 | 0.158 | 0.05 | CD4_CTL | L2 |
| ENSG00000187801 | ZFP69B | -329940 | sc-eQTL | 6.54e-01 | -0.0765 | 0.17 | 0.05 | CD4_CTL | L2 |
| ENSG00000187815 | ZFP69 | -357128 | sc-eQTL | 5.34e-01 | 0.115 | 0.185 | 0.05 | CD4_CTL | L2 |
| ENSG00000259943 | AL050341.2 | -137805 | sc-eQTL | 3.02e-04 | 0.64 | 0.174 | 0.05 | CD4_CTL | L2 |
| ENSG00000272145 | NFYC-AS1 | -571904 | sc-eQTL | 2.97e-01 | -0.196 | 0.187 | 0.05 | CD4_CTL | L2 |
| ENSG00000043514 | TRIT1 | 236651 | sc-eQTL | 5.75e-01 | -0.124 | 0.22 | 0.067 | PB | L2 |
| ENSG00000049089 | COL9A2 | -197651 | sc-eQTL | 8.67e-01 | 0.0325 | 0.194 | 0.067 | PB | L2 |
| ENSG00000066136 | NFYC | -571486 | sc-eQTL | 8.71e-02 | 0.359 | 0.208 | 0.067 | PB | L2 |
| ENSG00000084070 | SMAP2 | -224688 | sc-eQTL | 3.32e-01 | 0.148 | 0.152 | 0.067 | PB | L2 |
| ENSG00000084072 | PPIE | 427980 | sc-eQTL | 5.56e-01 | -0.117 | 0.197 | 0.067 | PB | L2 |
| ENSG00000084073 | ZMPSTE24 | -138074 | sc-eQTL | 4.21e-01 | -0.145 | 0.179 | 0.067 | PB | L2 |
| ENSG00000090621 | PABPC4 | 543372 | sc-eQTL | 3.01e-01 | 0.124 | 0.119 | 0.067 | PB | L2 |
| ENSG00000116985 | BMP8B | 331297 | sc-eQTL | 6.77e-01 | -0.0577 | 0.138 | 0.067 | PB | L2 |
| ENSG00000117000 | RLF | -41225 | sc-eQTL | 4.29e-01 | 0.176 | 0.222 | 0.067 | PB | L2 |
| ENSG00000117010 | ZNF684 | -411411 | sc-eQTL | 7.35e-01 | 0.0627 | 0.185 | 0.067 | PB | L2 |
| ENSG00000131236 | CAP1 | 79929 | sc-eQTL | 3.69e-01 | 0.167 | 0.185 | 0.067 | PB | L2 |
| ENSG00000131238 | PPT1 | 22435 | sc-eQTL | 5.36e-01 | 0.126 | 0.203 | 0.067 | PB | L2 |
| ENSG00000164002 | EXO5 | -388579 | sc-eQTL | 3.47e-01 | 0.192 | 0.203 | 0.067 | PB | L2 |
| ENSG00000171793 | CTPS1 | -859526 | sc-eQTL | 2.50e-02 | -0.475 | 0.209 | 0.067 | PB | L2 |
| ENSG00000179862 | CITED4 | -742201 | sc-eQTL | 8.04e-01 | -0.047 | 0.189 | 0.067 | PB | L2 |
| ENSG00000187815 | ZFP69 | -357128 | sc-eQTL | 1.34e-01 | 0.299 | 0.198 | 0.067 | PB | L2 |
| ENSG00000198754 | OXCT2 | 348814 | sc-eQTL | 4.18e-02 | 0.362 | 0.176 | 0.067 | PB | L2 |
| ENSG00000259943 | AL050341.2 | -137805 | sc-eQTL | 6.50e-01 | -0.0957 | 0.211 | 0.067 | PB | L2 |
| ENSG00000272145 | NFYC-AS1 | -571904 | sc-eQTL | 5.54e-01 | -0.118 | 0.198 | 0.067 | PB | L2 |
|
Gene ID
|
Gene Symbol
|
TSS Distance
|
Category
|
P-value
|
Effect Size
|
Effect Size (se)
|
MAF
|
Cell type
|
Cluster resolution
|
|---|
|
Gene ID
|
Gene Symbol |
TSS Distance
|
Category |
P-value |
Effect Size
|
Effect Size (se)
|
PIP (SuSiE)
|
PIP (FINEMAP)
|
MAF
|
|---|---|---|---|---|---|---|---|---|---|
| ENSG00000066136 | NFYC | -571527 | eQTL | 0.0354 | -0.0439 | 0.0208 | 0.0 | 0.0 | 0.0486 |
| ENSG00000116983 | HPCAL4 | 428677 | eQTL | 0.0415 | -0.0692 | 0.0339 | 0.0 | 0.0 | 0.0486 |
| ENSG00000117000 | RLF | -41225 | eQTL | 1.43e-14 | 0.201 | 0.0257 | 0.00558 | 0.0056 | 0.0486 |
| ENSG00000117013 | KCNQ4 | -663625 | eQTL | 6.93e-03 | -0.218 | 0.0807 | 0.0 | 0.0 | 0.0486 |
| ENSG00000131238 | PPT1 | 22435 | eQTL | 3.03e-27 | 0.7 | 0.0627 | 0.0 | 0.0 | 0.0486 |
| ENSG00000164002 | EXO5 | -388579 | eQTL | 2.00e-02 | -0.114 | 0.0491 | 0.0 | 0.0 | 0.0486 |
| ENSG00000168389 | MFSD2A | 165050 | eQTL | 0.0339 | -0.0849 | 0.04 | 0.0 | 0.0 | 0.0486 |
| ENSG00000259943 | AL050341.2 | -137805 | eQTL | 7.3e-08 | -0.243 | 0.0447 | 0.0 | 0.0 | 0.0486 |
|
Gene ID
|
Gene Symbol |
TSS Distance
|
Whole Blood |
Muscle Skeletal |
Liver |
Brain Cerebellum |
Prostate |
Spleen |
Skin Sun Exposed Lower leg |
Artery Coronary |
Esophagus Muscularis |
Esophagus Gastroesophageal Junction |
Artery Tibial |
Heart Atrial Appendage |
Nerve Tibial |
Heart Left Ventricle |
Adrenal Gland |
Adipose Visceral Omentum |
Pancreas |
Lung |
Pituitary |
Brain Nucleus accumbens basal ganglia |
Colon Transverse |
Adipose Subcutaneous |
Esophagus Mucosa |
Brain Cortex |
Thyroid |
Stomach |
Breast Mammary Tissue |
Colon Sigmoid |
Skin Not Sun Exposed Suprapubic |
Testis |
Artery Aorta |
Brain Amygdala |
Brain Anterior cingulate cortex BA24 |
Brain Caudate basal ganglia |
Brain Cerebellar Hemisphere |
Brain Frontal Cortex BA9 |
Brain Hippocampus |
Brain Hypothalamus |
Brain Putamen basal ganglia |
Brain Spinal cord cervical c-1 |
Brain Substantia nigra |
Cells Cultured fibroblasts |
Cells EBV-transformed lymphocytes |
Kidney Cortex |
Minor Salivary Gland |
Ovary |
Small Intestine Terminal Ileum |
Uterus |
Vagina |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ENSG00000084073 | \N | -138074 | 4.25e-06 | 4.67e-06 | 8.29e-07 | 2.63e-06 | 1.33e-06 | 1.33e-06 | 3.57e-06 | 9.77e-07 | 4.55e-06 | 2.22e-06 | 4.46e-06 | 3.41e-06 | 6.61e-06 | 2.19e-06 | 1.35e-06 | 2.98e-06 | 1.79e-06 | 2.74e-06 | 1.37e-06 | 1.01e-06 | 2.63e-06 | 4.35e-06 | 3.38e-06 | 1.55e-06 | 5.15e-06 | 1.43e-06 | 2.55e-06 | 1.73e-06 | 4.3e-06 | 3.38e-06 | 2.12e-06 | 5.58e-07 | 5.51e-07 | 1.8e-06 | 2.09e-06 | 9.44e-07 | 9.59e-07 | 4.24e-07 | 1.06e-06 | 3.57e-07 | 5.18e-07 | 5.14e-06 | 3.82e-07 | 1.65e-07 | 5.95e-07 | 7.09e-07 | 1.01e-06 | 4.11e-07 | 3.91e-07 |
| ENSG00000117000 | RLF | -41225 | 1.33e-05 | 1.38e-05 | 2.59e-06 | 9e-06 | 2.54e-06 | 6.32e-06 | 1.96e-05 | 3.02e-06 | 1.5e-05 | 7.64e-06 | 1.86e-05 | 7.21e-06 | 2.38e-05 | 5.14e-06 | 4.71e-06 | 9.02e-06 | 7.38e-06 | 1.22e-05 | 4.19e-06 | 4.11e-06 | 7.56e-06 | 1.36e-05 | 1.37e-05 | 4.85e-06 | 2.42e-05 | 5.18e-06 | 7.74e-06 | 6.54e-06 | 1.59e-05 | 1.27e-05 | 9.73e-06 | 1.22e-06 | 1.51e-06 | 4.09e-06 | 6.34e-06 | 3.78e-06 | 1.81e-06 | 2.6e-06 | 2.78e-06 | 2.05e-06 | 1.55e-06 | 1.74e-05 | 2.25e-06 | 3.24e-07 | 1.85e-06 | 2.59e-06 | 2.8e-06 | 1.16e-06 | 1.03e-06 |
| ENSG00000117016 | \N | -545520 | 4.37e-07 | 2.56e-07 | 7.87e-08 | 2.58e-07 | 9.93e-08 | 1.44e-07 | 3.44e-07 | 7.52e-08 | 2.35e-07 | 1.5e-07 | 2.84e-07 | 2.04e-07 | 3.6e-07 | 8.85e-08 | 1.27e-07 | 1.26e-07 | 7.3e-08 | 2.87e-07 | 1.27e-07 | 8.1e-08 | 1.59e-07 | 2.3e-07 | 2.11e-07 | 6.52e-08 | 3.7e-07 | 1.94e-07 | 1.83e-07 | 1.88e-07 | 1.76e-07 | 1.89e-07 | 1.71e-07 | 7.4e-08 | 5.55e-08 | 1.03e-07 | 1.31e-07 | 5.23e-08 | 7.63e-08 | 6.89e-08 | 5.4e-08 | 7.28e-08 | 8.48e-08 | 2.71e-07 | 3.14e-08 | 1.94e-08 | 1.1e-07 | 1.37e-08 | 9.68e-08 | 3.25e-09 | 5.54e-08 |
| ENSG00000131238 | PPT1 | 22435 | 2.31e-05 | 2.41e-05 | 5.05e-06 | 1.35e-05 | 4.62e-06 | 1.19e-05 | 3.31e-05 | 4.07e-06 | 2.39e-05 | 1.25e-05 | 3.08e-05 | 1.23e-05 | 3.88e-05 | 1.03e-05 | 6.04e-06 | 1.42e-05 | 1.2e-05 | 2.06e-05 | 6.96e-06 | 6.34e-06 | 1.24e-05 | 2.47e-05 | 2.41e-05 | 8.24e-06 | 3.59e-05 | 6.74e-06 | 1.13e-05 | 1e-05 | 2.59e-05 | 2.17e-05 | 1.53e-05 | 1.63e-06 | 2.53e-06 | 6.8e-06 | 9.85e-06 | 5.23e-06 | 3.09e-06 | 3.19e-06 | 4.35e-06 | 3.35e-06 | 1.71e-06 | 2.87e-05 | 2.76e-06 | 4.38e-07 | 2.39e-06 | 3.65e-06 | 3.88e-06 | 1.58e-06 | 1.51e-06 |
| ENSG00000259943 | AL050341.2 | -137805 | 4.25e-06 | 4.67e-06 | 8.5e-07 | 2.6e-06 | 1.33e-06 | 1.33e-06 | 3.57e-06 | 9.96e-07 | 4.55e-06 | 2.26e-06 | 4.46e-06 | 3.39e-06 | 6.61e-06 | 2.17e-06 | 1.35e-06 | 2.96e-06 | 1.86e-06 | 2.75e-06 | 1.35e-06 | 9.86e-07 | 2.63e-06 | 4.35e-06 | 3.38e-06 | 1.6e-06 | 5.08e-06 | 1.43e-06 | 2.57e-06 | 1.73e-06 | 4.32e-06 | 3.38e-06 | 2.12e-06 | 5.58e-07 | 5.51e-07 | 1.84e-06 | 2.1e-06 | 9.43e-07 | 9.59e-07 | 4.24e-07 | 1.08e-06 | 3.57e-07 | 5.44e-07 | 5.14e-06 | 3.82e-07 | 1.65e-07 | 5.96e-07 | 7.44e-07 | 1.01e-06 | 4.11e-07 | 3.29e-07 |
| ENSG00000261798 | \N | 331186 | 1.25e-06 | 9.35e-07 | 2.81e-07 | 5.65e-07 | 2.53e-07 | 4.51e-07 | 1.08e-06 | 3.45e-07 | 1.13e-06 | 3.66e-07 | 1.33e-06 | 5.49e-07 | 1.46e-06 | 2.68e-07 | 4.35e-07 | 6.35e-07 | 7.43e-07 | 5.48e-07 | 5.29e-07 | 6.2e-07 | 3.91e-07 | 9.58e-07 | 7.16e-07 | 5.53e-07 | 1.86e-06 | 3.02e-07 | 6.85e-07 | 7.25e-07 | 9.32e-07 | 9.49e-07 | 5.23e-07 | 1.57e-07 | 2.24e-07 | 3.66e-07 | 4.15e-07 | 3.16e-07 | 3.96e-07 | 1.69e-07 | 2.17e-07 | 9.07e-08 | 3.05e-07 | 1.34e-06 | 5.33e-08 | 6.48e-08 | 1.45e-07 | 1.12e-07 | 2.37e-07 | 8.18e-08 | 1.07e-07 |