|
Gene ID
|
Gene Symbol
|
TSS Distance
|
Category
|
P-value
|
Effect Size
|
Effect Size (se)
|
MAF
|
Cell type
|
Cluster resolution
|
|---|
|
Gene ID
|
Gene Symbol
|
TSS Distance
|
Category
|
P-value
|
Effect Size
|
Effect Size (se)
|
MAF
|
Cell type
|
Cluster resolution
|
|---|---|---|---|---|---|---|---|---|---|
| ENSG00000043514 | TRIT1 | 234943 | sc-eQTL | 5.38e-01 | -0.117 | 0.19 | 0.05 | CD4_CTL | L2 |
| ENSG00000049089 | COL9A2 | -199359 | sc-eQTL | 6.73e-01 | -0.0615 | 0.146 | 0.05 | CD4_CTL | L2 |
| ENSG00000066136 | NFYC | -573194 | sc-eQTL | 6.83e-01 | 0.0821 | 0.201 | 0.05 | CD4_CTL | L2 |
| ENSG00000084070 | SMAP2 | -226396 | sc-eQTL | 3.79e-01 | -0.114 | 0.13 | 0.05 | CD4_CTL | L2 |
| ENSG00000084072 | PPIE | 426272 | sc-eQTL | 6.79e-01 | -0.0823 | 0.199 | 0.05 | CD4_CTL | L2 |
| ENSG00000084073 | ZMPSTE24 | -139782 | sc-eQTL | 8.09e-01 | -0.0482 | 0.199 | 0.05 | CD4_CTL | L2 |
| ENSG00000090621 | PABPC4 | 541664 | sc-eQTL | 3.13e-01 | -0.186 | 0.184 | 0.05 | CD4_CTL | L2 |
| ENSG00000116983 | HPCAL4 | 426969 | sc-eQTL | 5.76e-01 | -0.0969 | 0.173 | 0.05 | CD4_CTL | L2 |
| ENSG00000117000 | RLF | -42933 | sc-eQTL | 7.57e-01 | -0.059 | 0.191 | 0.05 | CD4_CTL | L2 |
| ENSG00000117010 | ZNF684 | -413119 | sc-eQTL | 8.18e-01 | 0.0414 | 0.18 | 0.05 | CD4_CTL | L2 |
| ENSG00000131236 | CAP1 | 78221 | sc-eQTL | 6.39e-03 | 0.349 | 0.126 | 0.05 | CD4_CTL | L2 |
| ENSG00000131238 | PPT1 | 20727 | sc-eQTL | 3.38e-01 | 0.192 | 0.2 | 0.05 | CD4_CTL | L2 |
| ENSG00000164002 | EXO5 | -390287 | sc-eQTL | 5.48e-01 | 0.113 | 0.188 | 0.05 | CD4_CTL | L2 |
| ENSG00000171793 | CTPS1 | -861234 | sc-eQTL | 7.24e-01 | -0.0651 | 0.184 | 0.05 | CD4_CTL | L2 |
| ENSG00000179862 | CITED4 | -743909 | sc-eQTL | 8.46e-01 | 0.0306 | 0.158 | 0.05 | CD4_CTL | L2 |
| ENSG00000187801 | ZFP69B | -331648 | sc-eQTL | 6.54e-01 | -0.0765 | 0.17 | 0.05 | CD4_CTL | L2 |
| ENSG00000187815 | ZFP69 | -358836 | sc-eQTL | 5.34e-01 | 0.115 | 0.185 | 0.05 | CD4_CTL | L2 |
| ENSG00000259943 | AL050341.2 | -139513 | sc-eQTL | 3.02e-04 | 0.64 | 0.174 | 0.05 | CD4_CTL | L2 |
| ENSG00000272145 | NFYC-AS1 | -573612 | sc-eQTL | 2.97e-01 | -0.196 | 0.187 | 0.05 | CD4_CTL | L2 |
| ENSG00000043514 | TRIT1 | 234943 | sc-eQTL | 5.75e-01 | -0.124 | 0.22 | 0.067 | PB | L2 |
| ENSG00000049089 | COL9A2 | -199359 | sc-eQTL | 8.67e-01 | 0.0325 | 0.194 | 0.067 | PB | L2 |
| ENSG00000066136 | NFYC | -573194 | sc-eQTL | 8.71e-02 | 0.359 | 0.208 | 0.067 | PB | L2 |
| ENSG00000084070 | SMAP2 | -226396 | sc-eQTL | 3.32e-01 | 0.148 | 0.152 | 0.067 | PB | L2 |
| ENSG00000084072 | PPIE | 426272 | sc-eQTL | 5.56e-01 | -0.117 | 0.197 | 0.067 | PB | L2 |
| ENSG00000084073 | ZMPSTE24 | -139782 | sc-eQTL | 4.21e-01 | -0.145 | 0.179 | 0.067 | PB | L2 |
| ENSG00000090621 | PABPC4 | 541664 | sc-eQTL | 3.01e-01 | 0.124 | 0.119 | 0.067 | PB | L2 |
| ENSG00000116985 | BMP8B | 329589 | sc-eQTL | 6.77e-01 | -0.0577 | 0.138 | 0.067 | PB | L2 |
| ENSG00000117000 | RLF | -42933 | sc-eQTL | 4.29e-01 | 0.176 | 0.222 | 0.067 | PB | L2 |
| ENSG00000117010 | ZNF684 | -413119 | sc-eQTL | 7.35e-01 | 0.0627 | 0.185 | 0.067 | PB | L2 |
| ENSG00000131236 | CAP1 | 78221 | sc-eQTL | 3.69e-01 | 0.167 | 0.185 | 0.067 | PB | L2 |
| ENSG00000131238 | PPT1 | 20727 | sc-eQTL | 5.36e-01 | 0.126 | 0.203 | 0.067 | PB | L2 |
| ENSG00000164002 | EXO5 | -390287 | sc-eQTL | 3.47e-01 | 0.192 | 0.203 | 0.067 | PB | L2 |
| ENSG00000171793 | CTPS1 | -861234 | sc-eQTL | 2.50e-02 | -0.475 | 0.209 | 0.067 | PB | L2 |
| ENSG00000179862 | CITED4 | -743909 | sc-eQTL | 8.04e-01 | -0.047 | 0.189 | 0.067 | PB | L2 |
| ENSG00000187815 | ZFP69 | -358836 | sc-eQTL | 1.34e-01 | 0.299 | 0.198 | 0.067 | PB | L2 |
| ENSG00000198754 | OXCT2 | 347106 | sc-eQTL | 4.18e-02 | 0.362 | 0.176 | 0.067 | PB | L2 |
| ENSG00000259943 | AL050341.2 | -139513 | sc-eQTL | 6.50e-01 | -0.0957 | 0.211 | 0.067 | PB | L2 |
| ENSG00000272145 | NFYC-AS1 | -573612 | sc-eQTL | 5.54e-01 | -0.118 | 0.198 | 0.067 | PB | L2 |
|
Gene ID
|
Gene Symbol
|
TSS Distance
|
Category
|
P-value
|
Effect Size
|
Effect Size (se)
|
MAF
|
Cell type
|
Cluster resolution
|
|---|
|
Gene ID
|
Gene Symbol |
TSS Distance
|
Category |
P-value |
Effect Size
|
Effect Size (se)
|
PIP (SuSiE)
|
PIP (FINEMAP)
|
MAF
|
|---|---|---|---|---|---|---|---|---|---|
| ENSG00000066136 | NFYC | -573235 | eQTL | 0.0405 | -0.0429 | 0.0209 | 0.0 | 0.0 | 0.0481 |
| ENSG00000116983 | HPCAL4 | 426969 | eQTL | 0.035 | -0.0719 | 0.0341 | 0.0 | 0.0 | 0.0481 |
| ENSG00000117000 | RLF | -42933 | eQTL | 4.19e-14 | 0.199 | 0.0259 | 0.00191 | 0.00186 | 0.0481 |
| ENSG00000117013 | KCNQ4 | -665333 | eQTL | 4.55e-03 | -0.231 | 0.0811 | 0.0 | 0.0 | 0.0481 |
| ENSG00000131238 | PPT1 | 20727 | eQTL | 1.53e-27 | 0.708 | 0.063 | 0.0 | 0.0 | 0.0481 |
| ENSG00000164002 | EXO5 | -390287 | eQTL | 1.40e-02 | -0.122 | 0.0494 | 0.0 | 0.0 | 0.0481 |
| ENSG00000168389 | MFSD2A | 163342 | eQTL | 0.0363 | -0.0842 | 0.0402 | 0.0 | 0.0 | 0.0481 |
| ENSG00000259943 | AL050341.2 | -139513 | eQTL | 7.58e-08 | -0.244 | 0.0449 | 0.0 | 0.0 | 0.0481 |
| ENSG00000261798 | AL033527.3 | 329478 | eQTL | 0.0469 | 0.157 | 0.079 | 0.0 | 0.0 | 0.0481 |
|
Gene ID
|
Gene Symbol |
TSS Distance
|
Whole Blood |
Muscle Skeletal |
Liver |
Brain Cerebellum |
Prostate |
Spleen |
Skin Sun Exposed Lower leg |
Artery Coronary |
Esophagus Muscularis |
Esophagus Gastroesophageal Junction |
Artery Tibial |
Heart Atrial Appendage |
Nerve Tibial |
Heart Left Ventricle |
Adrenal Gland |
Adipose Visceral Omentum |
Pancreas |
Lung |
Pituitary |
Brain Nucleus accumbens basal ganglia |
Colon Transverse |
Adipose Subcutaneous |
Esophagus Mucosa |
Brain Cortex |
Thyroid |
Stomach |
Breast Mammary Tissue |
Colon Sigmoid |
Skin Not Sun Exposed Suprapubic |
Testis |
Artery Aorta |
Brain Amygdala |
Brain Anterior cingulate cortex BA24 |
Brain Caudate basal ganglia |
Brain Cerebellar Hemisphere |
Brain Frontal Cortex BA9 |
Brain Hippocampus |
Brain Hypothalamus |
Brain Putamen basal ganglia |
Brain Spinal cord cervical c-1 |
Brain Substantia nigra |
Cells Cultured fibroblasts |
Cells EBV-transformed lymphocytes |
Kidney Cortex |
Minor Salivary Gland |
Ovary |
Small Intestine Terminal Ileum |
Uterus |
Vagina |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ENSG00000084073 | \N | -139782 | 4.04e-06 | 4.6e-06 | 5.11e-07 | 2.27e-06 | 6.82e-07 | 9.68e-07 | 2.79e-06 | 8.27e-07 | 2.73e-06 | 1.45e-06 | 4.02e-06 | 1.98e-06 | 6.77e-06 | 1.54e-06 | 1.03e-06 | 2.06e-06 | 1.8e-06 | 2.1e-06 | 1.46e-06 | 1.2e-06 | 1.37e-06 | 3.49e-06 | 3.32e-06 | 1.6e-06 | 4.89e-06 | 1.19e-06 | 1.58e-06 | 1.7e-06 | 3.88e-06 | 3.95e-06 | 2.02e-06 | 3.05e-07 | 6.01e-07 | 1.45e-06 | 1.98e-06 | 9.72e-07 | 9.07e-07 | 4.2e-07 | 1.3e-06 | 3.28e-07 | 2.11e-07 | 5.19e-06 | 5.97e-07 | 1.95e-07 | 3.27e-07 | 3.6e-07 | 8.54e-07 | 2.23e-07 | 2.46e-07 |
| ENSG00000117000 | RLF | -42933 | 9e-06 | 1.13e-05 | 1.33e-06 | 6.21e-06 | 2.24e-06 | 4.21e-06 | 1.15e-05 | 1.69e-06 | 9.27e-06 | 5.11e-06 | 1.24e-05 | 5.31e-06 | 1.76e-05 | 3.53e-06 | 2.83e-06 | 6.42e-06 | 4.94e-06 | 6.88e-06 | 2.68e-06 | 2.93e-06 | 4.94e-06 | 9.52e-06 | 8.08e-06 | 3.4e-06 | 1.55e-05 | 3.22e-06 | 4.56e-06 | 3.31e-06 | 1.1e-05 | 1.15e-05 | 5.58e-06 | 7.89e-07 | 1.25e-06 | 3e-06 | 4.6e-06 | 2.36e-06 | 1.72e-06 | 1.83e-06 | 2.23e-06 | 9.75e-07 | 9.55e-07 | 1.37e-05 | 1.25e-06 | 1.7e-07 | 6.86e-07 | 1.61e-06 | 1.08e-06 | 6.58e-07 | 5.82e-07 |
| ENSG00000117016 | \N | -547228 | 5.74e-07 | 3.23e-07 | 7.76e-08 | 3.19e-07 | 1.07e-07 | 1.54e-07 | 3.7e-07 | 7.56e-08 | 2.26e-07 | 1.46e-07 | 3.47e-07 | 1.91e-07 | 4.88e-07 | 9.18e-08 | 1.07e-07 | 1.14e-07 | 9.3e-08 | 2.9e-07 | 9.97e-08 | 7.54e-08 | 1.35e-07 | 2.3e-07 | 2.33e-07 | 5.11e-08 | 4.46e-07 | 1.86e-07 | 1.72e-07 | 1.7e-07 | 2.03e-07 | 2.59e-07 | 1.88e-07 | 5.32e-08 | 4.76e-08 | 1.15e-07 | 1.83e-07 | 4.77e-08 | 7.74e-08 | 5.71e-08 | 5.25e-08 | 7.89e-08 | 3.17e-08 | 3.27e-07 | 3.53e-08 | 1.71e-08 | 5.84e-08 | 8.76e-09 | 9.07e-08 | 0.0 | 4.68e-08 |
| ENSG00000131238 | PPT1 | 20727 | 1.33e-05 | 1.56e-05 | 2.55e-06 | 9.42e-06 | 2.43e-06 | 6.65e-06 | 2.09e-05 | 2.18e-06 | 1.41e-05 | 6.72e-06 | 1.82e-05 | 7.07e-06 | 2.87e-05 | 6.34e-06 | 4.6e-06 | 8.68e-06 | 8.19e-06 | 1.18e-05 | 4.36e-06 | 4.08e-06 | 7e-06 | 1.37e-05 | 1.42e-05 | 4.94e-06 | 2.58e-05 | 4.58e-06 | 7.29e-06 | 5.54e-06 | 1.66e-05 | 2.02e-05 | 1.01e-05 | 1.06e-06 | 1.4e-06 | 4.05e-06 | 6.48e-06 | 3.8e-06 | 1.84e-06 | 2.35e-06 | 3.15e-06 | 2.1e-06 | 1.12e-06 | 2.01e-05 | 1.84e-06 | 2.5e-07 | 9.84e-07 | 2.35e-06 | 2e-06 | 6.86e-07 | 4.79e-07 |
| ENSG00000259943 | AL050341.2 | -139513 | 4.04e-06 | 4.65e-06 | 4.93e-07 | 2.32e-06 | 6.82e-07 | 9.87e-07 | 2.84e-06 | 8.45e-07 | 2.69e-06 | 1.45e-06 | 4.02e-06 | 1.98e-06 | 6.98e-06 | 1.64e-06 | 1.03e-06 | 2.06e-06 | 1.82e-06 | 2.08e-06 | 1.46e-06 | 1.24e-06 | 1.4e-06 | 3.49e-06 | 3.3e-06 | 1.64e-06 | 4.89e-06 | 1.19e-06 | 1.58e-06 | 1.69e-06 | 3.82e-06 | 3.95e-06 | 2.02e-06 | 3.05e-07 | 6.21e-07 | 1.45e-06 | 1.98e-06 | 9.73e-07 | 8.91e-07 | 4.2e-07 | 1.3e-06 | 3.28e-07 | 2.11e-07 | 5.19e-06 | 5.97e-07 | 1.95e-07 | 3.27e-07 | 3.6e-07 | 8.54e-07 | 2.23e-07 | 2.46e-07 |
| ENSG00000261798 | AL033527.3 | 329478 | 1.29e-06 | 9.1e-07 | 2.75e-07 | 6.97e-07 | 1.64e-07 | 4.67e-07 | 1.13e-06 | 2.88e-07 | 1.11e-06 | 3.82e-07 | 1.35e-06 | 5.73e-07 | 1.86e-06 | 2.59e-07 | 4.12e-07 | 5.49e-07 | 7.77e-07 | 5.48e-07 | 4.7e-07 | 4.71e-07 | 2.8e-07 | 9.67e-07 | 7.95e-07 | 4.83e-07 | 1.95e-06 | 2.54e-07 | 6.3e-07 | 5.33e-07 | 9.65e-07 | 1.13e-06 | 5.26e-07 | 4.28e-08 | 1.35e-07 | 3.91e-07 | 4.25e-07 | 3.05e-07 | 4.13e-07 | 1.37e-07 | 1.94e-07 | 8.76e-08 | 1.99e-07 | 1.62e-06 | 6.81e-08 | 2.66e-08 | 1.8e-07 | 7.43e-08 | 1.68e-07 | 3.84e-08 | 6.12e-08 |