Genes within 1Mb (chr1:39798728:G:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000043514 TRIT1 -84783 eQTL 6.68e-09 -0.111 0.019 0.0 0.0 0.354
ENSG00000084072 PPIE 106546 eQTL 1.84e-12 -0.171 0.0239 0.0 0.0 0.354
ENSG00000116954 RRAGC 938956 eQTL 1.70e-03 -0.0615 0.0195 0.00531 0.00464 0.354
ENSG00000116990 MYCL -103528 eQTL 2.11e-03 0.0509 0.0165 0.00342 0.00147 0.354
ENSG00000127603 MACF1 717412 eQTL 2.13e-02 0.0375 0.0162 0.0 0.0 0.354
ENSG00000131238 PPT1 -298999 eQTL 1.27e-02 -0.0725 0.0291 0.0 0.0 0.354
ENSG00000164002 EXO5 -710013 eQTL 4.75e-02 -0.0426 0.0215 0.0 0.0 0.354
ENSG00000168389 MFSD2A -156384 eQTL 3.95e-02 0.036 0.0175 0.0 0.0 0.354
ENSG00000187815 ZFP69 -678562 eQTL 3.11e-02 -0.0454 0.021 0.0 0.0 0.354
ENSG00000228477 AL663070.1 -163952 eQTL 1.86e-02 0.0606 0.0257 0.00165 0.0 0.354
ENSG00000237624 OXCT2P1 283772 eQTL 3.95e-03 0.117 0.0404 0.0 0.0 0.354
ENSG00000261798 AL033527.3 9752 eQTL 2.48e-03 -0.104 0.0342 0.0 0.0 0.354
ENSG00000284719 AL033527.5 -694 eQTL 3.08e-16 -0.321 0.0386 0.0 0.0 0.354


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000043514 TRIT1 -84783 4.99e-06 5.78e-06 6.64e-07 3.45e-06 1.75e-06 1.52e-06 6.72e-06 1.11e-06 4.82e-06 2.81e-06 6.97e-06 2.83e-06 8.81e-06 1.91e-06 1.11e-06 4.06e-06 1.98e-06 3.95e-06 1.43e-06 1.33e-06 2.77e-06 5.53e-06 4.72e-06 1.55e-06 8.57e-06 2.05e-06 2.29e-06 1.71e-06 4.66e-06 5.37e-06 2.62e-06 4.18e-07 7.03e-07 1.65e-06 1.98e-06 1.09e-06 1.07e-06 5.42e-07 8.38e-07 6.18e-07 6.37e-07 7.04e-06 6.31e-07 1.52e-07 5.77e-07 1.32e-06 1.16e-06 7.35e-07 3.6e-07
ENSG00000084072 PPIE 106546 4.26e-06 4.77e-06 8.3e-07 2.43e-06 1.31e-06 1.49e-06 3.83e-06 1.01e-06 4.76e-06 2.06e-06 4.84e-06 3.31e-06 7.55e-06 2.3e-06 1.4e-06 2.99e-06 2.06e-06 2.9e-06 1.33e-06 9.5e-07 2.16e-06 4.42e-06 3.58e-06 1.71e-06 5.54e-06 1.38e-06 2.53e-06 1.79e-06 4.38e-06 4.19e-06 2.38e-06 5.93e-07 7.91e-07 1.76e-06 2.16e-06 9.79e-07 9.7e-07 4.58e-07 1.07e-06 3.57e-07 4.03e-07 5.27e-06 4.01e-07 1.63e-07 4.33e-07 3.93e-07 8.4e-07 4.25e-07 2.56e-07
ENSG00000127603 MACF1 717412 2.74e-07 1.25e-07 4.47e-08 1.84e-07 9.21e-08 9.76e-08 1.49e-07 5.4e-08 1.45e-07 4.74e-08 1.62e-07 8.68e-08 1.41e-07 6.56e-08 6.17e-08 7.3e-08 3.87e-08 1.21e-07 5.82e-08 4.1e-08 1.08e-07 1.27e-07 1.39e-07 3.49e-08 1.4e-07 1.14e-07 1.07e-07 9.57e-08 1.08e-07 1.07e-07 9.64e-08 3.64e-08 3.61e-08 8.44e-08 7.02e-08 3.65e-08 4.99e-08 8.72e-08 6.54e-08 4.02e-08 4.36e-08 1.33e-07 5.2e-08 7.66e-09 5.43e-08 1.99e-08 1.22e-07 1.88e-09 4.94e-08
ENSG00000168389 MFSD2A -156384 2.28e-06 2.34e-06 2.73e-07 1.71e-06 4.94e-07 8.21e-07 1.59e-06 6.05e-07 1.81e-06 8.27e-07 2.12e-06 1.35e-06 3.49e-06 1.24e-06 5.01e-07 1.49e-06 1.07e-06 1.92e-06 7.31e-07 1.09e-06 7.37e-07 2.44e-06 2.02e-06 1e-06 3.4e-06 1.26e-06 1.19e-06 1.4e-06 1.8e-06 1.84e-06 1.31e-06 2.62e-07 4.71e-07 1.01e-06 1.09e-06 8.7e-07 7.27e-07 4.74e-07 7.29e-07 3.54e-07 2.89e-07 2.99e-06 4.96e-07 1.95e-07 3.38e-07 2.98e-07 6.24e-07 2.41e-07 2.97e-07
ENSG00000237624 OXCT2P1 283772 1.2e-06 9e-07 2.15e-07 3.15e-07 1.14e-07 3.54e-07 7.99e-07 2.65e-07 8.92e-07 2.98e-07 1.13e-06 5.73e-07 1.34e-06 2.05e-07 3.96e-07 4.91e-07 6.83e-07 5.16e-07 3.84e-07 3.42e-07 2.29e-07 5.86e-07 5.67e-07 3.29e-07 1.64e-06 2.38e-07 5.24e-07 4.4e-07 6.84e-07 9.58e-07 4.59e-07 4.25e-08 1.34e-07 2.33e-07 3.67e-07 2.91e-07 2.46e-07 1.23e-07 1.13e-07 9.74e-09 1.22e-07 9.76e-07 7.6e-08 6.41e-08 2e-07 4.33e-08 1.97e-07 8.66e-08 5.26e-08
ENSG00000261798 AL033527.3 9752 3.08e-05 3.01e-05 5.99e-06 1.51e-05 5.71e-06 1.39e-05 4.1e-05 4.37e-06 2.88e-05 1.45e-05 3.61e-05 1.61e-05 4.6e-05 1.32e-05 6.73e-06 1.75e-05 1.61e-05 2.35e-05 7.62e-06 6.6e-06 1.4e-05 3.03e-05 2.92e-05 8.66e-06 4.09e-05 7.68e-06 1.32e-05 1.22e-05 3.05e-05 2.59e-05 1.87e-05 1.64e-06 2.68e-06 7.07e-06 1.12e-05 5.85e-06 3.2e-06 3.17e-06 4.8e-06 3.35e-06 1.66e-06 3.54e-05 3.44e-06 3.84e-07 2.49e-06 3.84e-06 4.08e-06 1.6e-06 1.56e-06
ENSG00000284719 AL033527.5 -694 0.000116 0.000112 3.11e-05 5.71e-05 3.36e-05 5.28e-05 0.000144 2.92e-05 0.000125 8.35e-05 0.000172 6.75e-05 0.000177 5.45e-05 3.44e-05 9.53e-05 6.79e-05 0.000119 4.31e-05 4.93e-05 8.11e-05 0.000131 0.000118 5.75e-05 0.00017 4.9e-05 7.37e-05 6.4e-05 0.000122 0.000123 9.17e-05 1.75e-05 2.41e-05 4.24e-05 4.83e-05 3.98e-05 2.63e-05 2.45e-05 3.33e-05 1.33e-05 1.7e-05 0.000127 1.61e-05 5.15e-06 2.03e-05 2.83e-05 1.92e-05 1.58e-05 1e-05