Genes within 1Mb (chr1:39662380:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000084072 PPIE -29802 eQTL 2.72e-02 -0.136 0.0613 0.0 0.0 0.0378
ENSG00000090621 PABPC4 85590 eQTL 8.66e-05 -0.0974 0.0247 0.0 0.0 0.0378
ENSG00000116954 RRAGC 802608 eQTL 2.17e-02 0.113 0.049 0.00181 0.0 0.0378
ENSG00000116983 HPCAL4 -29105 eQTL 2.94e-02 -0.0808 0.037 0.0 0.0 0.0378
ENSG00000127603 MACF1 581064 eQTL 2.90e-02 0.0889 0.0407 0.0 0.0 0.0378
ENSG00000174574 AKIRIN1 671104 eQTL 4.08e-03 -0.0623 0.0217 0.0 0.0 0.0378
ENSG00000237624 OXCT2P1 147424 eQTL 6.62e-04 0.345 0.101 0.0 0.0 0.0378
ENSG00000243970 PPIEL 102709 eQTL 1.13e-02 0.166 0.0655 0.0 0.0 0.0378
ENSG00000284719 AL033527.5 -137042 eQTL 5.98e-03 0.275 0.0998 0.0 0.0 0.0378


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000043514 \N -221131 1.21e-06 8.36e-07 1.27e-07 6.94e-07 1.08e-07 2.86e-07 6.23e-07 1.21e-07 4.61e-07 2.39e-07 9.47e-07 3.48e-07 1.1e-06 1.6e-07 2.35e-07 1.96e-07 3.63e-07 3.95e-07 1.55e-07 2.78e-07 1.8e-07 3.49e-07 4.2e-07 1.32e-07 1.46e-06 2.49e-07 4.27e-07 2.71e-07 5.41e-07 6.03e-07 3.49e-07 5.69e-08 5.53e-08 1.56e-07 3.98e-07 7.56e-08 1.12e-07 8.04e-08 4.23e-08 1.63e-08 1.01e-07 7.53e-07 4.12e-08 1.66e-07 2.03e-07 1.75e-08 7.25e-08 2.31e-08 6.26e-08
ENSG00000084072 PPIE -29802 1.1e-05 1.19e-05 1.33e-06 6.97e-06 2.1e-06 5.08e-06 1.19e-05 2.19e-06 9.97e-06 5.31e-06 1.33e-05 5.48e-06 1.7e-05 3.68e-06 2.44e-06 6.29e-06 4.22e-06 7.77e-06 2.55e-06 2.85e-06 4.68e-06 9.52e-06 7.64e-06 3.15e-06 1.39e-05 3.49e-06 4.8e-06 3.42e-06 1.14e-05 8.58e-06 5.94e-06 7.85e-07 7.36e-07 2.83e-06 4.89e-06 2.07e-06 1.47e-06 1.9e-06 1.39e-06 1.01e-06 8.23e-07 1.28e-05 1.48e-06 1.92e-07 7.04e-07 1.31e-06 1.16e-06 7.28e-07 4.82e-07
ENSG00000090621 PABPC4 85590 4.2e-06 4.65e-06 3.23e-07 3.02e-06 4.39e-07 1.05e-06 2.48e-06 8.31e-07 2.53e-06 1.2e-06 3.76e-06 1.67e-06 6.48e-06 1.25e-06 9.19e-07 1.7e-06 1.49e-06 2.15e-06 1.15e-06 1.07e-06 1.07e-06 3.19e-06 3.06e-06 1.08e-06 4.64e-06 1.21e-06 1.65e-06 1.85e-06 3.77e-06 2.94e-06 1.99e-06 3.03e-07 3.72e-07 1.21e-06 2.15e-06 7.46e-07 7.5e-07 4.1e-07 8.73e-07 4.17e-07 3.05e-07 4.17e-06 5.89e-07 1.64e-07 2.91e-07 2.95e-07 4.63e-07 2.45e-07 1.56e-07
ENSG00000116983 HPCAL4 -29105 1.14e-05 1.21e-05 1.26e-06 7.07e-06 2.12e-06 5.16e-06 1.23e-05 2.09e-06 1.01e-05 5.49e-06 1.38e-05 5.61e-06 1.76e-05 3.5e-06 2.54e-06 6.48e-06 4.36e-06 7.72e-06 2.67e-06 2.79e-06 4.64e-06 9.61e-06 7.98e-06 3.21e-06 1.48e-05 3.68e-06 4.86e-06 3.66e-06 1.18e-05 8.81e-06 6.33e-06 8.39e-07 8.28e-07 2.84e-06 5.01e-06 2.04e-06 1.55e-06 1.94e-06 1.39e-06 9.79e-07 8.74e-07 1.29e-05 1.46e-06 1.9e-07 7.78e-07 1.36e-06 1.23e-06 6.95e-07 4.36e-07
ENSG00000237624 OXCT2P1 147424 1.38e-06 1.52e-06 3.41e-07 1.64e-06 2.1e-07 6.17e-07 1.49e-06 3.44e-07 1.49e-06 4.48e-07 2.03e-06 6.6e-07 2.61e-06 2.77e-07 5.28e-07 8.27e-07 8.49e-07 7.19e-07 5.88e-07 5.13e-07 3.95e-07 1.38e-06 9.11e-07 6.28e-07 2.36e-06 4.36e-07 9.37e-07 6.88e-07 1.63e-06 1.25e-06 7.47e-07 7.24e-08 1.48e-07 6.99e-07 9.62e-07 4.09e-07 6.1e-07 1.58e-07 2.56e-07 2.88e-07 3.02e-07 1.58e-06 1.09e-07 1.6e-07 2.5e-07 8.83e-08 2.01e-07 7e-08 1.58e-07
ENSG00000260920 \N -801939 2.66e-07 1.08e-07 3.35e-08 1.78e-07 1.02e-07 9.13e-08 1.39e-07 5.24e-08 1.36e-07 4.23e-08 1.63e-07 7.6e-08 1.23e-07 6.07e-08 4.89e-08 7.76e-08 5.1e-08 1.06e-07 5.12e-08 3.74e-08 1.03e-07 1.31e-07 1.31e-07 4.99e-08 1.29e-07 1.09e-07 1.13e-07 8.45e-08 9.97e-08 1.1e-07 9.5e-08 3.8e-08 2.74e-08 8.3e-08 9.07e-08 4.07e-08 4.99e-08 9.35e-08 8.22e-08 3.07e-08 4.18e-08 1.37e-07 4.01e-08 7.47e-09 7.91e-08 1.78e-08 1.35e-07 4.33e-09 4.74e-08