Genes within 1Mb (chr1:39610649:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000084070 SMAP2 -734201 eQTL 1.58e-02 0.0261 0.0108 0.0 0.0 0.268
ENSG00000084072 PPIE -81533 eQTL 8.21e-01 -0.00582 0.0257 0.0011 0.0 0.268
ENSG00000090621 PABPC4 33859 eQTL 6.25e-23 0.1 0.00988 0.0125 0.0154 0.268
ENSG00000116983 HPCAL4 -80836 eQTL 4.63e-02 0.0309 0.0155 0.0 0.0 0.268
ENSG00000116985 BMP8B -178216 eQTL 2.47e-02 -0.0677 0.0301 0.0 0.0 0.268
ENSG00000116990 MYCL -291607 eQTL 6.44e-03 -0.0472 0.0173 0.00232 0.0 0.268
ENSG00000131238 PPT1 -487078 eQTL 3.56e-02 0.064 0.0304 0.0 0.0 0.268
ENSG00000168653 NDUFS5 584331 eQTL 2.00e-06 -0.0924 0.0193 0.0 0.0 0.268
ENSG00000183682 BMP8A 119013 eQTL 2.15e-12 -0.19 0.0266 0.0322 0.0305 0.268
ENSG00000187801 ZFP69B -839458 eQTL 3.13e-02 -0.0611 0.0283 0.0 0.0 0.268
ENSG00000228436 AL139260.1 750649 eQTL 5.40e-02 0.0843 0.0437 0.00107 0.0 0.268
ENSG00000243970 PPIEL 50978 eQTL 7.82e-11 -0.177 0.0268 0.001 0.00915 0.268
ENSG00000259943 AL050341.2 -647318 eQTL 5.82e-03 -0.057 0.0206 0.0 0.0 0.268
ENSG00000260920 AL031985.3 -853670 eQTL 2.17e-02 -0.059 0.0257 0.0 0.0 0.268


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000090621 PABPC4 33859 8.12e-06 1.15e-05 1.56e-06 6.16e-06 2.42e-06 4.19e-06 1.13e-05 2.13e-06 9.93e-06 5.57e-06 1.36e-05 5.9e-06 1.74e-05 3.63e-06 3.01e-06 6.33e-06 4.74e-06 7.87e-06 2.61e-06 2.84e-06 5.12e-06 1.04e-05 8.72e-06 3.35e-06 1.55e-05 4.28e-06 5.21e-06 4.08e-06 1.08e-05 9.37e-06 6.43e-06 1.05e-06 1.21e-06 3.31e-06 5.01e-06 2.59e-06 1.63e-06 1.89e-06 2.19e-06 1.02e-06 1.04e-06 1.36e-05 1.49e-06 2.1e-07 7.67e-07 1.8e-06 1.47e-06 7.66e-07 4.62e-07
ENSG00000168653 NDUFS5 584331 4.89e-07 2.56e-07 7.92e-08 2.58e-07 1.03e-07 8.4e-08 3.57e-07 6.57e-08 2.04e-07 1.37e-07 3.25e-07 2.22e-07 4.88e-07 8.55e-08 7.79e-08 1.13e-07 9.3e-08 2.87e-07 9.71e-08 8.39e-08 1.33e-07 2.24e-07 2.33e-07 9.01e-08 3.98e-07 1.82e-07 1.39e-07 1.61e-07 1.76e-07 2.97e-07 1.86e-07 6.2e-08 6.08e-08 1.21e-07 1.07e-07 5.05e-08 9.9e-08 6.1e-08 5.86e-08 7.39e-08 9.77e-08 2.74e-07 2.16e-08 1.24e-08 9.95e-08 9.65e-09 9.07e-08 0.0 5.56e-08
ENSG00000183682 BMP8A 119013 3.54e-06 4.09e-06 5.11e-07 1.8e-06 7.03e-07 7.58e-07 2.38e-06 9.12e-07 3.05e-06 1.42e-06 4.08e-06 2.87e-06 6.55e-06 1.37e-06 8.88e-07 1.98e-06 1.55e-06 2.26e-06 1.58e-06 1.05e-06 1.21e-06 3.5e-06 3.44e-06 1.6e-06 4.89e-06 1.24e-06 1.77e-06 1.69e-06 3.58e-06 3.64e-06 1.89e-06 4.54e-07 5.69e-07 1.68e-06 1.96e-06 9.1e-07 8.71e-07 4.65e-07 1.32e-06 3.46e-07 2.4e-07 4.58e-06 5.05e-07 1.58e-07 2.97e-07 3.61e-07 8.36e-07 2.2e-07 1.74e-07
ENSG00000243970 PPIEL 50978 5.87e-06 9.31e-06 9.77e-07 4.16e-06 1.71e-06 2.2e-06 9.53e-06 1.86e-06 6.39e-06 4.04e-06 1.03e-05 4.77e-06 1.16e-05 3.5e-06 1.62e-06 4.67e-06 3.71e-06 4.39e-06 1.94e-06 2.53e-06 2.8e-06 7.55e-06 5.82e-06 1.93e-06 1.15e-05 2.55e-06 3.99e-06 2.27e-06 7.05e-06 7.71e-06 4.38e-06 5.83e-07 7.9e-07 2.74e-06 3.56e-06 1.71e-06 1.02e-06 1.06e-06 1.36e-06 7.37e-07 7.1e-07 9.58e-06 9.02e-07 2.07e-07 7.87e-07 9.57e-07 9.61e-07 6.81e-07 6.03e-07