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Genes within 1Mb (chr1:37554146:C:T):

View on , UCSC , GTEx , gnomAD

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116922 C1orf109 -138103 eQTL 2.41e-02 0.0473 0.021 0.0 0.0 0.455
ENSG00000134697 GNL2 -41791 eQTL 2.44e-13 -0.141 0.019 0.0 0.0 0.455
ENSG00000163874 ZC3H12A 79566 eQTL 5.67e-03 -0.0283 0.0102 0.0022 0.00148 0.455
ENSG00000163875 MEAF6 39372 eQTL 1.58e-11 0.104 0.0152 0.0 0.0 0.455
ENSG00000163877 SNIP1 -147 eQTL 1.04e-40 -0.218 0.0155 0.0 0.0 0.455
ENSG00000163879 DNALI1 -2773 eQTL 5.99e-05 -0.163 0.0404 0.0312 0.028 0.455
ENSG00000169218 RSPO1 -80746 pQTL 2.59e-03 -0.0527 0.0174 0.0 0.0 0.46
ENSG00000204084 INPP5B -392911 eQTL 4.25e-04 0.121 0.0341 0.0 0.0 0.455
ENSG00000232273 FTH1P1 9383 eQTL 1.86e-02 -0.0584 0.0247 0.0 0.0 0.455
ENSG00000233621 LINC01137 79735 eQTL 7.69e-07 -0.11 0.0221 0.0 0.0 0.455

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000134697 GNL2 -41791 0.000162 0.000178 4.11e-05 8.46e-05 5.67e-05 6.89e-05 0.000185 5.09e-05 0.000199 0.000139 0.000226 0.000116 0.000274 7.94e-05 4.46e-05 0.000152 9.28e-05 0.000193 6.43e-05 6.12e-05 0.000117 0.000206 0.000174 6.18e-05 0.000226 7.64e-05 0.000102 0.000103 0.00017 7.51e-05 0.000123 1.99e-05 2.04e-05 5.6e-05 5.46e-05 4.29e-05 2.49e-05 2.97e-05 3.37e-05 2.44e-05 2.01e-05 0.000164 1.68e-05 5.27e-06 2.27e-05 4.4e-05 3.88e-05 2.37e-05 1.66e-05
ENSG00000163875 MEAF6 39372 0.000166 0.000185 4.16e-05 8.87e-05 5.87e-05 7.11e-05 0.000192 5.3e-05 0.000207 0.000143 0.000235 0.000121 0.000281 8.29e-05 4.68e-05 0.000159 9.41e-05 0.000202 6.73e-05 6.2e-05 0.000123 0.000215 0.000182 6.38e-05 0.000233 7.97e-05 0.000104 0.000108 0.000177 7.63e-05 0.000129 2.05e-05 2.13e-05 5.6e-05 5.59e-05 4.36e-05 2.53e-05 3.08e-05 3.61e-05 2.57e-05 2.06e-05 0.000173 1.76e-05 5.47e-06 2.49e-05 4.48e-05 4.07e-05 2.36e-05 1.73e-05
ENSG00000163877 SNIP1 -147 0.000987 0.00135 0.00023 0.000436 0.000442 0.000577 0.00102 0.000309 0.00142 0.000654 0.00146 0.000781 0.00197 0.000531 0.000255 0.000635 0.000478 0.00106 0.000543 0.000283 0.00101 0.00105 0.001 0.00039 0.00138 0.000483 0.000607 0.000763 0.00136 0.000403 0.00096 0.000146 0.000147 0.000352 0.000323 0.000249 0.000157 0.000141 0.000215 0.000193 0.0001 0.00113 0.000137 2e-05 0.000108 0.000369 0.000235 0.000173 9.87e-05
ENSG00000163879 DNALI1 -2773 0.000426 0.000545 0.000135 0.000293 0.000362 0.000261 0.000545 0.000309 0.000677 0.000359 0.000669 0.000398 0.000858 0.000331 0.00017 0.000509 0.000294 0.000638 0.000383 0.000255 0.000453 0.000609 0.000496 0.000313 0.00077 0.00035 0.000375 0.000438 0.000668 0.000262 0.000495 0.00013 0.000116 0.000242 0.000203 0.00017 0.000113 0.000127 0.000153 0.000164 0.0001 0.000538 6.81e-05 2e-05 0.000108 0.000296 0.000204 0.000173 8.95e-05
ENSG00000232273 FTH1P1 9383 0.000333 0.000395 6.5e-05 0.000138 0.000124 0.000142 0.000397 9.7e-05 0.000361 0.000206 0.000433 0.000206 0.000492 0.00018 9.72e-05 0.000256 0.000183 0.000297 0.00013 0.000104 0.000226 0.000383 0.000339 0.000109 0.000433 0.000156 0.000198 0.000187 0.00035 0.000183 0.000239 4.33e-05 4.51e-05 8.42e-05 0.000104 7.21e-05 4.29e-05 5.35e-05 6.31e-05 5.55e-05 3.4e-05 0.000423 4.93e-05 8.05e-06 5.77e-05 8.37e-05 7.26e-05 5.08e-05 3.39e-05
ENSG00000233621 LINC01137 79735 0.000112 0.00012 2.29e-05 4.62e-05 2.69e-05 3.84e-05 0.000108 2.45e-05 0.000117 7.3e-05 0.000127 6.7e-05 0.000166 4.8e-05 2.53e-05 8.79e-05 6.07e-05 0.00011 3.38e-05 4.13e-05 5.4e-05 0.000131 0.000106 3.23e-05 0.000134 4.14e-05 6.15e-05 5.53e-05 0.000104 4.5e-05 6.7e-05 9.65e-06 1.02e-05 3.38e-05 2.62e-05 2.4e-05 1.19e-05 1.47e-05 1.69e-05 1.35e-05 1.19e-05 0.000105 1.07e-05 3.06e-06 1.06e-05 2.45e-05 2.08e-05 1.3e-05 7.5e-06