Genes within 1Mb (chr1:36499531:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000020129 NCDN 942058 eQTL 3.77e-02 -0.0454 0.0218 0.00172 0.0 0.116
ENSG00000092850 TEKT2 415437 eQTL 5.20e-04 0.224 0.0644 0.0 0.0 0.116
ENSG00000092853 CLSPN 729553 eQTL 5.55e-02 0.0361 0.0188 0.00109 0.0 0.116
ENSG00000116898 MRPS15 35147 eQTL 6.67e-04 -0.0793 0.0232 0.00104 0.0 0.116
ENSG00000119535 CSF3R 16253 pQTL 3.59e-02 0.0709 0.0338 0.0 0.0 0.114
ENSG00000134698 AGO4 691515 eQTL 2.33e-02 -0.03 0.0132 0.00178 0.0 0.116
ENSG00000142687 KIAA0319L 941581 eQTL 2.87e-02 -0.0377 0.0172 0.0 0.0 0.116
ENSG00000181817 LSM10 101623 eQTL 3.26e-06 -0.0888 0.019 0.0 0.0 0.116
ENSG00000196182 STK40 113635 eQTL 3.47e-02 0.0313 0.0148 0.00103 0.0 0.116
ENSG00000239636 AC004865.2 921802 eQTL 1.64e-04 0.17 0.045 0.0 0.0 0.116


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000092850 TEKT2 415437 1.22e-06 4.93e-07 1.46e-07 3.95e-07 1.13e-07 3.18e-07 5.13e-07 8.86e-08 2.75e-07 1.65e-07 3.47e-07 2.55e-07 6e-07 1.17e-07 2.07e-07 1.26e-07 2.25e-07 3.44e-07 1.89e-07 1.39e-07 1.52e-07 2.96e-07 2.56e-07 1.34e-07 5.15e-07 2.07e-07 2.23e-07 1.47e-07 2.31e-07 3.71e-07 2.19e-07 4.21e-08 6.08e-08 1.21e-07 3.5e-07 5.51e-08 1.09e-07 1.03e-07 4.04e-08 7.5e-08 3.17e-08 2.74e-07 4.18e-08 1.04e-08 9.15e-08 1.31e-08 9.1e-08 2.38e-08 6.17e-08
ENSG00000116863 \N 410639 1.25e-06 4.97e-07 1.5e-07 4.08e-07 1.06e-07 3.22e-07 5.28e-07 9.07e-08 2.78e-07 1.7e-07 3.92e-07 2.98e-07 6.08e-07 1.34e-07 2.15e-07 1.33e-07 2.34e-07 3.56e-07 1.93e-07 1.43e-07 1.6e-07 2.99e-07 2.63e-07 1.44e-07 5.75e-07 2.13e-07 2.22e-07 1.44e-07 2.57e-07 3.93e-07 2.43e-07 4.31e-08 5.73e-08 1.16e-07 3.82e-07 5.2e-08 1.05e-07 1.06e-07 4.17e-08 5.64e-08 3.27e-08 2.8e-07 4.3e-08 1.06e-08 9.79e-08 1.35e-08 9.38e-08 2.44e-08 5.95e-08
ENSG00000116885 \N 49080 4.85e-05 1.67e-05 2.57e-06 9.48e-06 2.38e-06 8.67e-06 2.08e-05 2.14e-06 1.62e-05 6.68e-06 1.79e-05 7.03e-06 2.69e-05 6.34e-06 4.27e-06 8.68e-06 7.74e-06 1.35e-05 3.65e-06 3.25e-06 6.47e-06 1.42e-05 1.27e-05 3.99e-06 2.05e-05 4.33e-06 7.59e-06 5.28e-06 1.53e-05 1.18e-05 1.08e-05 9.73e-07 1.25e-06 3.68e-06 5.85e-06 2.66e-06 1.83e-06 1.99e-06 2.2e-06 1.73e-06 9.4e-07 1.73e-05 2.34e-06 1.58e-07 9.48e-07 1.67e-06 1.99e-06 7e-07 4.51e-07
ENSG00000171812 \N 374309 1.26e-06 6.78e-07 2.41e-07 4.06e-07 1.1e-07 4.63e-07 6.18e-07 1.38e-07 4.3e-07 2.34e-07 6.28e-07 3.62e-07 9.37e-07 1.56e-07 3.08e-07 1.92e-07 4.54e-07 4.11e-07 2.65e-07 1.78e-07 1.87e-07 4.14e-07 3.3e-07 2.39e-07 8.33e-07 2.39e-07 3.1e-07 1.67e-07 3.88e-07 6.27e-07 3.49e-07 5.06e-08 4.55e-08 1.54e-07 3.24e-07 7.86e-08 1.43e-07 1.41e-07 6.49e-08 2.56e-08 4.67e-08 4.42e-07 6.04e-08 5.93e-09 1.33e-07 3.92e-08 7.25e-08 7.35e-08 4.96e-08
ENSG00000181817 LSM10 101623 1.88e-05 9.29e-06 1.35e-06 5.06e-06 1.71e-06 4.6e-06 1.01e-05 1.22e-06 7.74e-06 4.11e-06 9.93e-06 4.5e-06 1.31e-05 3.97e-06 1.83e-06 4.71e-06 3.74e-06 6.08e-06 2.18e-06 2.41e-06 3.08e-06 7.92e-06 5.66e-06 2.21e-06 9.69e-06 2.2e-06 4.16e-06 2.09e-06 7.5e-06 7.66e-06 5.04e-06 9.59e-07 7.03e-07 2.5e-06 3.5e-06 1.18e-06 1.03e-06 9.43e-07 1.35e-06 1.03e-06 6.6e-07 8.73e-06 1.28e-06 1.82e-07 7.74e-07 9.48e-07 9.51e-07 6.19e-07 5.88e-07
ENSG00000239636 AC004865.2 921802 2.74e-07 1.1e-07 3.88e-08 1.82e-07 8.92e-08 1e-07 1.38e-07 5.33e-08 1.41e-07 4.38e-08 1.62e-07 7.88e-08 1.26e-07 6.21e-08 5.84e-08 7.89e-08 4.48e-08 1.14e-07 5.19e-08 4.2e-08 1.05e-07 1.28e-07 1.3e-07 4.13e-08 1.31e-07 1.15e-07 1.12e-07 8.71e-08 9.88e-08 1.1e-07 9.58e-08 3.87e-08 2.92e-08 8.82e-08 8.74e-08 3.99e-08 5.03e-08 9.61e-08 7.58e-08 3e-08 4.44e-08 1.36e-07 4.19e-08 1.61e-08 6.92e-08 1.83e-08 1.25e-07 3.92e-09 4.81e-08