Genes within 1Mb (chr1:36458373:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000092850 TEKT2 374279 eQTL 2.34e-03 -0.129 0.0422 0.0 0.0 0.385
ENSG00000116871 MAP7D1 302794 eQTL 1.66e-02 0.0305 0.0127 0.0 0.0 0.385
ENSG00000116885 OSCP1 7922 eQTL 3.23e-19 -0.199 0.0217 0.0107 0.0106 0.385
ENSG00000116898 MRPS15 -6011 eQTL 2.29e-03 -0.0466 0.0152 0.0 0.0 0.385
ENSG00000119535 CSF3R -24905 pQTL 9.47e-02 -0.0371 0.0222 0.0025 0.0 0.389
ENSG00000119535 CSF3R -24905 eQTL 5.54e-06 0.0361 0.00791 0.0 0.0 0.385
ENSG00000142686 C1orf216 739479 eQTL 5.35e-05 -0.0723 0.0178 0.0 0.0 0.385
ENSG00000171812 COL8A2 333151 eQTL 2.60e-03 0.0676 0.0224 0.0 0.0 0.385
ENSG00000181817 LSM10 60465 eQTL 3.96e-04 0.0443 0.0125 0.0 0.0 0.385
ENSG00000196182 STK40 72477 eQTL 9.26e-03 -0.0252 0.00967 0.0 0.0 0.385
ENSG00000239636 AC004865.2 880644 eQTL 5.94e-04 -0.102 0.0295 0.0 0.0 0.385


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000020129 \N 900900 2.56e-07 1.16e-07 3.41e-08 1.65e-07 1.03e-07 9.14e-08 1.31e-07 5.29e-08 1.33e-07 3.99e-08 1.55e-07 7.49e-08 1.19e-07 6.1e-08 4.77e-08 7.4e-08 5.15e-08 1.02e-07 5.12e-08 2.88e-08 1.03e-07 1.31e-07 1.31e-07 5.19e-08 1.32e-07 1.03e-07 1.12e-07 8.27e-08 1.05e-07 1.08e-07 9.43e-08 3.59e-08 2.75e-08 8.09e-08 1.01e-07 4.14e-08 4.96e-08 8.75e-08 8.44e-08 3.8e-08 3.58e-08 1.42e-07 4.51e-08 1.55e-08 1.09e-07 1.83e-08 1.45e-07 4.7e-09 4.61e-08
ENSG00000092850 TEKT2 374279 2.67e-07 1.25e-07 3.59e-08 1.84e-07 8.83e-08 9.8e-08 1.44e-07 5.2e-08 1.4e-07 4.38e-08 1.6e-07 8.14e-08 1.26e-07 6.21e-08 5.55e-08 7.26e-08 3.9e-08 1.18e-07 5.82e-08 4.21e-08 1.19e-07 1.27e-07 1.32e-07 3.49e-08 1.33e-07 1.16e-07 1.12e-07 8.7e-08 1.05e-07 1.12e-07 9.58e-08 4.22e-08 3.89e-08 8.82e-08 8.38e-08 3.97e-08 5.08e-08 8.61e-08 7.47e-08 4.02e-08 4.02e-08 1.33e-07 5.24e-08 5.68e-08 4.92e-08 1.7e-08 1.19e-07 3.86e-09 4.81e-08
ENSG00000116885 OSCP1 7922 3.36e-05 3.08e-05 5.7e-06 1.51e-05 5.44e-06 1.32e-05 4.22e-05 4.37e-06 2.79e-05 1.39e-05 3.52e-05 1.63e-05 4.46e-05 1.35e-05 6.78e-06 1.63e-05 1.61e-05 2.33e-05 7.56e-06 6.6e-06 1.39e-05 3.03e-05 2.94e-05 8.47e-06 3.91e-05 7.34e-06 1.27e-05 1.17e-05 2.98e-05 2.37e-05 1.78e-05 1.63e-06 2.53e-06 6.8e-06 1.11e-05 5.16e-06 2.77e-06 3.13e-06 4.29e-06 3.17e-06 1.7e-06 3.61e-05 3.5e-06 2.62e-07 2.23e-06 3.54e-06 4.06e-06 1.4e-06 1.46e-06
ENSG00000116898 MRPS15 -6011 3.49e-05 3.22e-05 6.07e-06 1.55e-05 5.8e-06 1.38e-05 4.44e-05 4.49e-06 2.95e-05 1.49e-05 3.69e-05 1.72e-05 4.7e-05 1.41e-05 7.03e-06 1.79e-05 1.7e-05 2.44e-05 7.51e-06 6.66e-06 1.45e-05 3.27e-05 3.11e-05 8.66e-06 4.2e-05 7.7e-06 1.35e-05 1.26e-05 3.11e-05 2.47e-05 1.9e-05 1.59e-06 2.6e-06 7.07e-06 1.14e-05 5.52e-06 2.98e-06 3.18e-06 4.54e-06 3.24e-06 1.7e-06 3.78e-05 3.58e-06 2.91e-07 2.34e-06 3.72e-06 4.07e-06 1.45e-06 1.56e-06
ENSG00000119535 CSF3R -24905 1.51e-05 1.62e-05 1.99e-06 8.12e-06 2.32e-06 6.12e-06 2.04e-05 2.44e-06 1.37e-05 5.9e-06 1.75e-05 6.84e-06 2.18e-05 5.92e-06 3.75e-06 6.61e-06 7.86e-06 1.12e-05 3.42e-06 4.04e-06 6.66e-06 1.19e-05 1.2e-05 3.75e-06 2.04e-05 4.65e-06 7.15e-06 5.24e-06 1.45e-05 1.06e-05 7.81e-06 1.02e-06 1.4e-06 3.55e-06 6.38e-06 2.62e-06 1.87e-06 1.98e-06 2.08e-06 1.88e-06 9.79e-07 1.83e-05 2.06e-06 1.64e-07 8.89e-07 1.74e-06 1.74e-06 7.48e-07 4.64e-07
ENSG00000142686 C1orf216 739479 2.6e-07 1.11e-07 3.34e-08 1.67e-07 1.02e-07 9.05e-08 1.36e-07 5.24e-08 1.32e-07 3.99e-08 1.59e-07 7.49e-08 1.2e-07 6.1e-08 4.77e-08 7.76e-08 5.15e-08 1.06e-07 5.12e-08 2.85e-08 1.03e-07 1.31e-07 1.31e-07 5.01e-08 1.33e-07 1.09e-07 1.11e-07 8.27e-08 1.05e-07 1.09e-07 9.43e-08 3.52e-08 2.74e-08 8.09e-08 9.88e-08 4.26e-08 4.95e-08 9.06e-08 8.48e-08 3.69e-08 3.89e-08 1.42e-07 4.12e-08 1.43e-08 9.88e-08 1.83e-08 1.44e-07 4.6e-09 4.61e-08