Genes within 1Mb (chr1:36403825:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000092850 TEKT2 319731 eQTL 3.01e-04 0.156 0.043 0.0 0.0 0.35
ENSG00000116871 MAP7D1 248246 eQTL 1.40e-02 -0.032 0.013 0.0 0.0 0.35
ENSG00000116885 OSCP1 -46626 eQTL 5.21e-15 0.178 0.0224 0.0 0.0 0.35
ENSG00000116898 MRPS15 -60559 eQTL 4.04e-02 0.032 0.0156 0.0 0.0 0.35
ENSG00000119535 CSF3R -79453 pQTL 2.75e-06 0.106 0.0225 0.00192 0.00377 0.352
ENSG00000119535 CSF3R -79453 eQTL 4.39e-06 -0.0373 0.00808 0.0 0.0 0.35
ENSG00000134698 AGO4 595809 eQTL 8.23e-01 -0.00197 0.00884 0.00139 0.0 0.35
ENSG00000142686 C1orf216 684931 eQTL 7.55e-06 0.0818 0.0182 0.0 0.0 0.35
ENSG00000171812 COL8A2 278603 eQTL 6.93e-04 -0.0777 0.0228 0.0 0.0 0.35
ENSG00000181817 LSM10 5917 eQTL 1.09e-03 -0.0418 0.0128 0.0 0.0 0.35
ENSG00000196182 STK40 17929 eQTL 1.48e-02 0.0242 0.00989 0.0 0.0 0.35
ENSG00000239636 AC004865.2 826096 eQTL 4.87e-06 0.138 0.03 0.0 0.0 0.35


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000092850 TEKT2 319731 3.06e-06 2.54e-06 3.47e-07 1.97e-06 3.88e-07 8.02e-07 1.88e-06 4.97e-07 1.89e-06 8.25e-07 1.9e-06 1.25e-06 3.49e-06 1.12e-06 9e-07 1.54e-06 1.56e-06 2.11e-06 1.61e-06 1.19e-06 1.36e-06 2.06e-06 1.95e-06 8.41e-07 3.74e-06 1.26e-06 1.2e-06 1.63e-06 1.7e-06 2.81e-06 7.32e-07 2.48e-07 3e-07 1.09e-06 1.31e-06 7.22e-07 7.72e-07 2.44e-07 1.18e-06 4.07e-07 3.56e-07 3.32e-06 3.98e-07 1.32e-07 3.43e-07 3.21e-07 4.27e-07 1.45e-07 5.4e-08
ENSG00000116885 OSCP1 -46626 6.33e-05 2.04e-05 2.47e-06 1.28e-05 2.58e-06 1.15e-05 2.73e-05 2.99e-06 1.7e-05 7.84e-06 1.92e-05 6.98e-06 3.06e-05 6.61e-06 5.19e-06 1.03e-05 9.88e-06 2.1e-05 4.64e-06 4.09e-06 8.31e-06 1.79e-05 1.93e-05 5.19e-06 3.2e-05 5.5e-06 8.02e-06 7.73e-06 1.81e-05 1.71e-05 9.85e-06 9.89e-07 1.23e-06 4.07e-06 7.59e-06 2.85e-06 1.82e-06 1.83e-06 2.94e-06 1.6e-06 9.34e-07 3.02e-05 3.46e-06 1.95e-07 1.97e-06 1.75e-06 1.94e-06 7.04e-07 4.65e-07
ENSG00000116898 MRPS15 -60559 5.95e-05 1.9e-05 2.05e-06 1.24e-05 2.4e-06 1e-05 2.48e-05 2.58e-06 1.63e-05 6.99e-06 1.79e-05 6.49e-06 2.86e-05 5.92e-06 4.78e-06 9.51e-06 8.8e-06 1.89e-05 4.31e-06 3.59e-06 7.53e-06 1.58e-05 1.77e-05 4.8e-06 3e-05 5.34e-06 7.92e-06 6.91e-06 1.7e-05 1.61e-05 8.77e-06 1e-06 1.19e-06 3.85e-06 7.16e-06 2.8e-06 1.9e-06 1.46e-06 2.68e-06 1.38e-06 9.78e-07 2.78e-05 3.04e-06 1.9e-07 1.83e-06 1.78e-06 1.8e-06 7.8e-07 4.02e-07
ENSG00000119535 CSF3R -79453 5.17e-05 1.66e-05 1.63e-06 1.15e-05 2.45e-06 8.52e-06 2.2e-05 2.39e-06 1.45e-05 6.11e-06 1.58e-05 6.14e-06 2.53e-05 5.21e-06 4.32e-06 9.06e-06 8.14e-06 1.6e-05 3.79e-06 3.2e-06 6.93e-06 1.32e-05 1.49e-05 4.25e-06 2.73e-05 5e-06 7.59e-06 5.98e-06 1.57e-05 1.46e-05 7.58e-06 1.05e-06 1.19e-06 3.68e-06 6.48e-06 2.81e-06 1.78e-06 8.97e-07 2.25e-06 1.27e-06 9.79e-07 2.41e-05 2.83e-06 1.33e-07 1.36e-06 1.8e-06 1.56e-06 6.95e-07 5.43e-07
ENSG00000142686 C1orf216 684931 7.3e-07 2.88e-07 7.6e-08 3.43e-07 1.03e-07 2.01e-07 3.33e-07 5.84e-08 2.35e-07 1.15e-07 1.69e-07 1.11e-07 3.95e-07 8.55e-08 7.79e-08 1.49e-07 1.73e-07 3.79e-07 2.17e-07 6.16e-08 1.97e-07 1.98e-07 2.11e-07 3.68e-08 3.41e-07 2.46e-07 1.33e-07 1.68e-07 1.36e-07 3.93e-07 1.26e-07 3.06e-08 3.46e-08 1.18e-07 1.95e-07 3.57e-08 1e-07 9.03e-08 4.99e-08 3.01e-08 5.14e-08 2.9e-07 2.84e-08 7.32e-09 3.41e-08 1.05e-08 7.97e-08 1.88e-09 4.79e-08
ENSG00000239636 AC004865.2 826096 3.62e-07 1.56e-07 5.82e-08 2.41e-07 9.21e-08 1.13e-07 1.9e-07 5.48e-08 1.44e-07 6.08e-08 1.54e-07 8.36e-08 1.95e-07 8.13e-08 6.25e-08 9.01e-08 4.25e-08 2.33e-07 8.68e-08 4.31e-08 1.34e-07 1.25e-07 1.58e-07 3.03e-08 1.72e-07 1.56e-07 1.18e-07 1.12e-07 1.23e-07 1.38e-07 1.02e-07 4.07e-08 3.61e-08 9.58e-08 3.97e-08 3.14e-08 4.62e-08 9.22e-08 6.58e-08 7.17e-08 4.27e-08 1.55e-07 3.08e-08 7.51e-09 5.7e-08 1.77e-08 1.19e-07 4.04e-09 4.79e-08