Genes within 1Mb (chr1:36375371:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000054116 TRAPPC3 219318 eQTL 1.30e-02 0.0611 0.0245 0.0 0.0 0.051
ENSG00000054118 THRAP3 150939 eQTL 3.51e-02 -0.0509 0.0241 0.0 0.0 0.051
ENSG00000092850 TEKT2 291277 eQTL 2.06e-07 0.482 0.0921 0.0 0.0 0.051
ENSG00000116898 MRPS15 -89013 eQTL 3.83e-02 0.0697 0.0336 0.0 0.0 0.051
ENSG00000134698 AGO4 567355 eQTL 4.69e-02 0.0378 0.019 0.0 0.0 0.051
ENSG00000142686 C1orf216 656477 eQTL 6.34e-01 -0.0188 0.0395 0.00124 0.0 0.051
ENSG00000142687 KIAA0319L 817421 eQTL 2.38e-02 -0.0562 0.0248 0.0 0.0 0.051
ENSG00000181817 LSM10 -22537 eQTL 7.61e-03 0.0736 0.0275 0.0 0.0 0.051
ENSG00000214193 SH3D21 68984 eQTL 9.74e-02 0.0922 0.0555 0.00102 0.0 0.051
ENSG00000239636 AC004865.2 797642 eQTL 3.61e-04 0.232 0.0649 0.0 0.0 0.051


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000054116 TRAPPC3 219318 1.43e-06 1.27e-06 3.2e-07 1.17e-06 1.07e-07 6.02e-07 1.59e-06 3.27e-07 1.32e-06 4.24e-07 1.75e-06 6.08e-07 2e-06 2.73e-07 4.61e-07 7.3e-07 7.88e-07 6.13e-07 5.7e-07 4.36e-07 3.91e-07 1.22e-06 8.91e-07 5.6e-07 2.19e-06 3.91e-07 8.29e-07 6.51e-07 1.07e-06 1.22e-06 6.9e-07 7.37e-08 9.79e-08 5.18e-07 5.6e-07 2.15e-07 3.12e-07 1.55e-07 3.2e-07 2.42e-07 2.38e-07 1.65e-06 1.22e-07 1.31e-07 1.74e-07 1.02e-07 1.93e-07 7.35e-08 6.06e-08
ENSG00000092850 TEKT2 291277 1.26e-06 9.45e-07 1.22e-07 3.43e-07 1.1e-07 3.2e-07 6.87e-07 1.48e-07 6.27e-07 2.98e-07 1.07e-06 4.55e-07 9.77e-07 1.59e-07 2.96e-07 2.85e-07 3.93e-07 4.39e-07 2.57e-07 1.55e-07 2.3e-07 4.99e-07 4.66e-07 2.24e-07 1.46e-06 2.49e-07 4.25e-07 2.74e-07 4.63e-07 6.98e-07 4.26e-07 5.71e-08 5.48e-08 1.77e-07 3.4e-07 6.23e-08 1.11e-07 9.46e-08 8.26e-08 1.63e-08 9.84e-08 1.15e-06 5.54e-08 6.41e-08 1.33e-07 1.55e-08 1.21e-07 7.25e-09 4.59e-08
ENSG00000181817 LSM10 -22537 1.45e-05 2.03e-05 2.51e-06 9.48e-06 2.32e-06 7.21e-06 1.88e-05 2.45e-06 1.55e-05 7.23e-06 2.09e-05 7.65e-06 2.73e-05 6.04e-06 4.41e-06 8.94e-06 8.15e-06 1.2e-05 4.11e-06 3.12e-06 6.9e-06 1.39e-05 1.37e-05 3.99e-06 2.66e-05 5.09e-06 7.59e-06 5.43e-06 1.39e-05 1.27e-05 1.16e-05 1.06e-06 1.15e-06 3.8e-06 7.67e-06 2.87e-06 1.76e-06 2.13e-06 2.25e-06 1.34e-06 9.34e-07 2.33e-05 2.39e-06 2.52e-07 7.9e-07 2.27e-06 2.04e-06 8.34e-07 4.34e-07
ENSG00000239636 AC004865.2 797642 2.67e-07 1.11e-07 3.69e-08 1.82e-07 9.65e-08 9.57e-08 1.41e-07 5.35e-08 1.41e-07 4.38e-08 1.6e-07 8.03e-08 1.26e-07 6.21e-08 5.4e-08 7.89e-08 4.94e-08 1.14e-07 5.19e-08 3.88e-08 1.05e-07 1.3e-07 1.3e-07 4.54e-08 1.31e-07 1.15e-07 1.12e-07 8.7e-08 9.88e-08 1.09e-07 9.58e-08 3.76e-08 2.74e-08 8.82e-08 8.93e-08 4.02e-08 4.63e-08 9.56e-08 7.63e-08 3.01e-08 4.27e-08 1.31e-07 4.89e-08 7.47e-09 7.79e-08 1.7e-08 1.25e-07 4.26e-09 4.85e-08