Genes within 1Mb (chr1:36145121:C:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000020129 NCDN 587648 eQTL 5.48e-02 -0.0304 0.0158 0.00112 0.0 0.285
ENSG00000054116 TRAPPC3 -10932 eQTL 1.61e-09 -0.0741 0.0122 0.00507 0.0548 0.285
ENSG00000092850 TEKT2 61027 eQTL 1.43e-63 -0.736 0.0405 0.0 0.0 0.285
ENSG00000116560 SFPQ 951976 eQTL 2.81e-03 0.0366 0.0122 0.0 0.0 0.285
ENSG00000116819 TFAP2E 571807 eQTL 2.94e-02 0.0594 0.0272 0.0 0.0 0.285
ENSG00000116871 MAP7D1 -10458 eQTL 1.01e-03 -0.0464 0.0141 0.0 0.0 0.285
ENSG00000116898 MRPS15 -319263 eQTL 3.99e-02 0.0348 0.0169 0.0 0.0 0.285
ENSG00000119535 CSF3R -338157 pQTL 3.12e-02 -0.0526 0.0244 0.0 0.0 0.286
ENSG00000142687 KIAA0319L 587171 eQTL 9.81e-04 0.0412 0.0125 0.0 0.0 0.285
ENSG00000171812 COL8A2 19899 eQTL 2.88e-02 0.0544 0.0249 0.0 0.0 0.285
ENSG00000239636 AC004865.2 567392 eQTL 5.90e-34 -0.384 0.0304 0.0 0.0 0.285


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000054116 TRAPPC3 -10932 3.12e-05 3.04e-05 5.65e-06 1.51e-05 5.29e-06 1.36e-05 4.07e-05 4.28e-06 2.76e-05 1.44e-05 3.55e-05 1.59e-05 4.54e-05 1.3e-05 6.73e-06 1.67e-05 1.56e-05 2.29e-05 7.49e-06 6.43e-06 1.36e-05 2.96e-05 2.92e-05 8.53e-06 4.05e-05 7.14e-06 1.3e-05 1.16e-05 2.94e-05 2.4e-05 1.81e-05 1.61e-06 2.41e-06 6.79e-06 1.11e-05 5.31e-06 2.82e-06 3.13e-06 4.43e-06 3.22e-06 1.72e-06 3.56e-05 3.21e-06 3.24e-07 2.19e-06 3.67e-06 4.09e-06 1.49e-06 1.52e-06
ENSG00000092850 TEKT2 61027 9.25e-06 1.12e-05 1.23e-06 6.11e-06 2.19e-06 4.25e-06 1.05e-05 2.03e-06 9.26e-06 4.92e-06 1.24e-05 5.61e-06 1.4e-05 3.68e-06 2.6e-06 6.41e-06 4.31e-06 6.67e-06 2.65e-06 2.79e-06 4.67e-06 9e-06 7.23e-06 3.25e-06 1.37e-05 2.93e-06 4.88e-06 3.96e-06 8.58e-06 7.79e-06 5.15e-06 7.97e-07 1.1e-06 2.97e-06 4.55e-06 2.15e-06 1.4e-06 1.57e-06 1.59e-06 9.75e-07 7.36e-07 1.28e-05 1.42e-06 1.68e-07 7.34e-07 1.62e-06 1.3e-06 7.59e-07 5.82e-07
ENSG00000116871 MAP7D1 -10458 3.17e-05 3.07e-05 5.66e-06 1.53e-05 5.33e-06 1.37e-05 4.15e-05 4.35e-06 2.82e-05 1.45e-05 3.59e-05 1.61e-05 4.6e-05 1.3e-05 6.69e-06 1.72e-05 1.56e-05 2.32e-05 7.46e-06 6.5e-06 1.38e-05 2.99e-05 2.94e-05 8.51e-06 4.09e-05 7.28e-06 1.31e-05 1.18e-05 2.98e-05 2.45e-05 1.83e-05 1.59e-06 2.48e-06 6.84e-06 1.12e-05 5.45e-06 2.84e-06 3.14e-06 4.46e-06 3.24e-06 1.72e-06 3.61e-05 3.25e-06 3.33e-07 2.21e-06 3.72e-06 4.13e-06 1.49e-06 1.56e-06
ENSG00000171812 COL8A2 19899 2.2e-05 2.54e-05 3.99e-06 1.31e-05 3.64e-06 1.02e-05 3.09e-05 3.65e-06 2.05e-05 1.1e-05 2.78e-05 1.11e-05 3.72e-05 9.95e-06 5.71e-06 1.25e-05 1.14e-05 1.78e-05 6e-06 5.18e-06 9.62e-06 2.28e-05 2.24e-05 6.49e-06 3.32e-05 5.53e-06 9.54e-06 8.96e-06 2.25e-05 1.91e-05 1.34e-05 1.45e-06 1.91e-06 5.41e-06 9.11e-06 4.5e-06 2.05e-06 2.72e-06 3.52e-06 2.69e-06 1.48e-06 2.9e-05 2.65e-06 2.5e-07 1.93e-06 2.96e-06 3.35e-06 1.29e-06 1.07e-06
ENSG00000196182 \N -240775 1.28e-06 1.34e-06 3.2e-07 1.28e-06 2.71e-07 5.99e-07 1.63e-06 3.85e-07 1.49e-06 6.23e-07 1.85e-06 7.85e-07 2.23e-06 3.07e-07 5.22e-07 9.27e-07 9.23e-07 6.85e-07 8.48e-07 6.21e-07 7.54e-07 1.7e-06 8.98e-07 5.54e-07 2.21e-06 3.91e-07 9.62e-07 9.25e-07 1.29e-06 1.34e-06 7.26e-07 2.52e-07 2.62e-07 6.94e-07 5.15e-07 4.42e-07 6.66e-07 2.29e-07 4.04e-07 2.97e-07 2.77e-07 1.63e-06 1.23e-07 6.46e-08 1.84e-07 2.13e-07 2.22e-07 7.69e-08 9.51e-08
ENSG00000239636 AC004865.2 567392 2.95e-07 1.67e-07 5.03e-08 2.41e-07 1.01e-07 8.89e-08 1.9e-07 5.62e-08 1.44e-07 8.53e-08 1.61e-07 1.2e-07 1.95e-07 8.07e-08 5.72e-08 7.89e-08 4.18e-08 1.64e-07 7.09e-08 5.48e-08 1.18e-07 1.42e-07 1.64e-07 3.49e-08 1.85e-07 1.22e-07 1.17e-07 1.17e-07 1.26e-07 1.06e-07 1.09e-07 4.23e-08 3.65e-08 9.52e-08 4.04e-08 3.07e-08 6.24e-08 8.57e-08 6.62e-08 6.55e-08 5.44e-08 1.59e-07 5.27e-08 7.2e-09 3.42e-08 6.39e-09 8.81e-08 1.93e-09 4.83e-08