Genes within 1Mb (chr1:36058922:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000020129 NCDN 501449 eQTL 5.42e-02 -0.0291 0.0151 0.00101 0.0 0.325
ENSG00000054116 TRAPPC3 -97131 eQTL 7.07e-03 -0.0318 0.0118 0.0 0.0 0.325
ENSG00000092847 AGO1 189114 eQTL 1.38e-02 0.0434 0.0176 0.00148 0.0 0.325
ENSG00000092850 TEKT2 -25172 eQTL 9.70e-08 0.237 0.0442 0.0 0.0 0.325
ENSG00000092853 CLSPN 288944 eQTL 8.58e-03 0.0343 0.013 0.00145 0.0 0.325
ENSG00000116871 MAP7D1 -96657 eQTL 1.96e-03 -0.0416 0.0134 0.0 0.0 0.325
ENSG00000116883 AL591845.1 -264812 eQTL 1.99e-02 -0.0616 0.0264 0.0 0.0 0.325
ENSG00000126067 PSMB2 417396 eQTL 7.29e-03 0.0326 0.0121 0.0 0.0 0.325
ENSG00000134698 AGO4 250906 eQTL 1.36e-14 -0.0694 0.00887 0.0 0.0 0.325
ENSG00000142686 C1orf216 340028 eQTL 8.43e-61 -0.291 0.0165 0.0 0.0 0.325
ENSG00000142687 KIAA0319L 500972 eQTL 2.12e-02 -0.0275 0.0119 0.0 0.0 0.325
ENSG00000142694 EVA1B -265232 eQTL 3.85e-02 0.0426 0.0206 0.0 0.0 0.325
ENSG00000146463 ZMYM4 789955 eQTL 1.81e-06 -0.0781 0.0163 0.0 0.0 0.325
ENSG00000171812 COL8A2 -66300 eQTL 4.87e-12 0.162 0.0232 0.0135 0.0103 0.325
ENSG00000196182 STK40 -326974 eQTL 4.31e-05 -0.0418 0.0102 0.00144 0.00119 0.325
ENSG00000239636 AC004865.2 481193 eQTL 1.87e-31 -0.353 0.0292 0.0013 0.0 0.325


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000092847 AGO1 189114 1.36e-05 1.4e-05 2.67e-06 9.4e-06 2.97e-06 7.14e-06 2.06e-05 3.25e-06 1.64e-05 8.01e-06 1.94e-05 7.68e-06 2.5e-05 5.28e-06 4.5e-06 9.01e-06 7.86e-06 1.17e-05 4.12e-06 4.14e-06 7.96e-06 1.39e-05 1.33e-05 4.56e-06 2.27e-05 5.19e-06 7.96e-06 6.87e-06 1.51e-05 1.15e-05 9.4e-06 1.31e-06 1.74e-06 4.03e-06 6.37e-06 3.3e-06 2.05e-06 2.68e-06 2.81e-06 2.6e-06 1.59e-06 1.79e-05 2.67e-06 3.78e-07 1.85e-06 2.61e-06 2.51e-06 1.26e-06 1.01e-06
ENSG00000092850 TEKT2 -25172 5.12e-05 4.22e-05 8.49e-06 2.01e-05 8.85e-06 2.03e-05 6.08e-05 7.6e-06 4.97e-05 2.54e-05 6.22e-05 2.68e-05 6.99e-05 1.9e-05 1.06e-05 3.09e-05 2.62e-05 3.86e-05 1.15e-05 1.03e-05 2.64e-05 5.11e-05 4.33e-05 1.32e-05 6.47e-05 1.46e-05 2.29e-05 2.04e-05 4.44e-05 3.56e-05 3.25e-05 3.3e-06 5.75e-06 9.22e-06 1.68e-05 8.12e-06 5.09e-06 5.28e-06 7.12e-06 4.37e-06 1.97e-06 4.84e-05 4.89e-06 5.9e-07 3.92e-06 6.27e-06 6.45e-06 2.96e-06 2.45e-06
ENSG00000116560 \N 865777 6.97e-07 4.78e-07 1.05e-07 4.31e-07 1.1e-07 2.77e-07 6.18e-07 1.59e-07 4.3e-07 2.62e-07 7.67e-07 3.36e-07 9.1e-07 1.6e-07 1.57e-07 1.84e-07 3.69e-07 3.74e-07 2.87e-07 1.28e-07 2.38e-07 4.31e-07 3.87e-07 1.19e-07 7.01e-07 2.33e-07 2.52e-07 2.59e-07 3.27e-07 8.48e-07 2.93e-07 8.25e-08 5.3e-08 1.5e-07 2.82e-07 1.82e-07 2.46e-07 1.18e-07 1.94e-07 1.63e-08 5.19e-08 3.66e-07 5.89e-08 1.77e-08 4.91e-08 1.61e-08 9.25e-08 1.26e-08 5.65e-08
ENSG00000116871 MAP7D1 -96657 3.63e-05 3.18e-05 6.12e-06 1.55e-05 6.33e-06 1.6e-05 4.55e-05 5.69e-06 3.43e-05 1.64e-05 4.15e-05 1.87e-05 5e-05 1.3e-05 7.14e-06 1.86e-05 1.65e-05 2.54e-05 7.91e-06 7.35e-06 1.64e-05 3.22e-05 3.09e-05 9.09e-06 4.38e-05 8.89e-06 1.62e-05 1.33e-05 3.26e-05 2.28e-05 2.13e-05 1.75e-06 3.61e-06 7.33e-06 1.2e-05 5.68e-06 3.67e-06 3.37e-06 5.2e-06 3.69e-06 1.77e-06 3.71e-05 3.87e-06 4.6e-07 2.78e-06 4.65e-06 4.23e-06 2.02e-06 1.53e-06
ENSG00000126070 \N 128204 2.62e-05 2.54e-05 4.66e-06 1.35e-05 5.25e-06 1.29e-05 3.58e-05 4.44e-06 2.6e-05 1.31e-05 3.22e-05 1.44e-05 3.96e-05 1.02e-05 5.99e-06 1.35e-05 1.29e-05 1.98e-05 6.78e-06 6.18e-06 1.26e-05 2.47e-05 2.41e-05 7.43e-06 3.46e-05 6.95e-06 1.21e-05 1.07e-05 2.57e-05 1.78e-05 1.55e-05 1.61e-06 2.68e-06 6.33e-06 9.85e-06 4.59e-06 3.11e-06 3.19e-06 4.25e-06 3.36e-06 1.66e-06 3e-05 3.39e-06 4.28e-07 2.39e-06 3.66e-06 3.8e-06 1.6e-06 1.56e-06
ENSG00000134698 AGO4 250906 7.94e-06 9.64e-06 1.5e-06 6.02e-06 2.42e-06 4.55e-06 1.09e-05 2.18e-06 9.83e-06 5.3e-06 1.24e-05 5.61e-06 1.39e-05 3.78e-06 2.59e-06 6.54e-06 4.31e-06 6.55e-06 2.93e-06 2.77e-06 6.05e-06 9.34e-06 7.22e-06 3.17e-06 1.24e-05 3.73e-06 5.21e-06 4.51e-06 8.97e-06 7.84e-06 5.07e-06 9.91e-07 1.2e-06 3.26e-06 4.14e-06 2.56e-06 1.79e-06 2.06e-06 2.21e-06 1.38e-06 9.4e-07 1.16e-05 2.23e-06 2.62e-07 7.99e-07 1.67e-06 1.38e-06 7.87e-07 4.73e-07
ENSG00000142686 C1orf216 340028 4.74e-06 5.09e-06 6.63e-07 3.6e-06 1.71e-06 1.53e-06 6.46e-06 1.15e-06 5.05e-06 2.8e-06 6.45e-06 3.37e-06 7.73e-06 1.92e-06 1.21e-06 3.83e-06 1.92e-06 3.71e-06 1.63e-06 1.39e-06 3.02e-06 4.98e-06 4.58e-06 1.41e-06 6.11e-06 1.96e-06 2.34e-06 1.78e-06 4.38e-06 4.43e-06 2.77e-06 4.46e-07 7.83e-07 1.82e-06 2.09e-06 1.17e-06 1.19e-06 1.08e-06 1.41e-06 8.9e-07 6.39e-07 5.71e-06 1.29e-06 1.54e-07 6.09e-07 1.1e-06 9.92e-07 6.95e-07 5.73e-07
ENSG00000142687 KIAA0319L 500972 1.35e-06 1.91e-06 2.97e-07 1.69e-06 5.1e-07 8.24e-07 1.36e-06 5.85e-07 1.69e-06 7.36e-07 1.99e-06 1.32e-06 3.07e-06 8.74e-07 3.31e-07 1.02e-06 9.83e-07 1.34e-06 9.43e-07 6.52e-07 1.34e-06 2.07e-06 1.68e-06 6.86e-07 2.43e-06 9.13e-07 1.06e-06 1.26e-06 1.67e-06 1.67e-06 7.32e-07 2.49e-07 4.53e-07 8.88e-07 7.59e-07 8.66e-07 8.21e-07 4.25e-07 1.23e-06 3.98e-07 3.68e-07 2.01e-06 3.99e-07 1.91e-07 2.8e-07 3.17e-07 2.6e-07 2.23e-07 2.46e-07
ENSG00000142694 EVA1B -265232 7.55e-06 9.33e-06 1.35e-06 5.06e-06 2.38e-06 4.2e-06 1.02e-05 2.04e-06 8.81e-06 4.97e-06 1.1e-05 5.15e-06 1.23e-05 3.85e-06 2.18e-06 5.95e-06 3.81e-06 5.33e-06 2.69e-06 2.88e-06 5.55e-06 8.12e-06 6.78e-06 2.82e-06 1.12e-05 3.11e-06 4.87e-06 3.74e-06 7.59e-06 7.74e-06 4.51e-06 1.11e-06 1.09e-06 2.96e-06 3.62e-06 2.22e-06 1.85e-06 1.95e-06 2.18e-06 1.2e-06 1e-06 9.72e-06 1.82e-06 2.5e-07 7.68e-07 1.73e-06 1.23e-06 6.9e-07 4.47e-07
ENSG00000171812 COL8A2 -66300 4.56e-05 3.73e-05 7.01e-06 1.69e-05 7.36e-06 1.82e-05 5.32e-05 6.5e-06 4.17e-05 1.99e-05 5.04e-05 2.22e-05 5.93e-05 1.6e-05 8.67e-06 2.45e-05 2.12e-05 3.18e-05 9.6e-06 8.77e-06 2.09e-05 4.07e-05 3.65e-05 1.05e-05 5.36e-05 1.15e-05 1.89e-05 1.62e-05 3.86e-05 2.85e-05 2.65e-05 2.45e-06 4.74e-06 8.12e-06 1.37e-05 6.86e-06 4.28e-06 3.83e-06 6.08e-06 3.95e-06 1.9e-06 4.33e-05 4.47e-06 5.28e-07 3.16e-06 5.23e-06 4.86e-06 2.54e-06 1.74e-06
ENSG00000196182 STK40 -326974 4.63e-06 5.15e-06 6.33e-07 3.51e-06 1.5e-06 1.95e-06 7.69e-06 1.18e-06 4.5e-06 3.15e-06 7.34e-06 2.86e-06 8.51e-06 1.89e-06 1.02e-06 3.84e-06 2.24e-06 3.98e-06 1.84e-06 1.51e-06 3.42e-06 5.5e-06 4.62e-06 1.65e-06 7.21e-06 2.05e-06 2.55e-06 1.75e-06 4.4e-06 5.02e-06 2.68e-06 4.82e-07 7.03e-07 2.24e-06 2e-06 1.3e-06 1.35e-06 1.45e-06 1.32e-06 1.04e-06 7.46e-07 5.84e-06 1.38e-06 1.64e-07 7.72e-07 9.92e-07 1.12e-06 6.4e-07 5.49e-07
ENSG00000239636 AC004865.2 481193 1.55e-06 2.19e-06 2.5e-07 1.86e-06 4.39e-07 7.85e-07 1.82e-06 6.34e-07 1.7e-06 9.02e-07 2.11e-06 1.48e-06 3.44e-06 1.11e-06 4.61e-07 1.06e-06 9.67e-07 1.55e-06 1.33e-06 8.39e-07 1.4e-06 2.57e-06 1.88e-06 8.41e-07 2.65e-06 1.07e-06 1.15e-06 1.51e-06 1.68e-06 1.79e-06 9.97e-07 2.46e-07 5.24e-07 1.22e-06 9.62e-07 9.66e-07 9.08e-07 4.67e-07 1.32e-06 3.46e-07 3.31e-07 2.48e-06 3.83e-07 1.99e-07 3.15e-07 3.21e-07 3.01e-07 2.46e-07 2.22e-07