Genes within 1Mb (chr1:36016250:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000092853 CLSPN 246272 eQTL 8.68e-03 -0.069 0.0262 0.00178 0.0 0.0594
ENSG00000116560 SFPQ 823105 eQTL 8.75e-03 -0.0618 0.0235 0.00161 0.0 0.0594
ENSG00000116819 TFAP2E 442936 eQTL 1.28e-02 -0.13 0.0523 0.00109 0.0 0.0594
ENSG00000116863 ADPRHL2 -72642 eQTL 1.20e-02 0.0754 0.0299 0.0 0.0 0.0594
ENSG00000116883 AL591845.1 -307484 eQTL 2.29e-02 -0.121 0.0533 0.0 0.0 0.0594
ENSG00000134698 AGO4 208234 eQTL 2.30e-07 0.0948 0.0182 0.0 0.0 0.0594
ENSG00000142686 C1orf216 297356 eQTL 6.97e-12 0.259 0.0373 0.0 0.0 0.0594
ENSG00000142687 KIAA0319L 458300 eQTL 1.31e-02 0.0597 0.024 0.0 0.0 0.0594
ENSG00000146463 ZMYM4 747283 eQTL 8.30e-05 0.13 0.0329 0.0 0.0 0.0594
ENSG00000171812 COL8A2 -108972 eQTL 4.08e-02 -0.0979 0.0478 0.0 0.0 0.0594
ENSG00000239636 AC004865.2 438521 eQTL 1.04e-05 0.277 0.0626 0.0 0.0 0.0594


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116819 TFAP2E 442936 8.43e-07 5.67e-07 1.22e-07 4.29e-07 1.18e-07 2.64e-07 5.54e-07 2.06e-07 5.02e-07 2.82e-07 6.56e-07 3.62e-07 7.93e-07 1.49e-07 2.18e-07 2.89e-07 3.93e-07 4.07e-07 2.6e-07 1.67e-07 2.61e-07 4.11e-07 3.81e-07 2.17e-07 7.72e-07 2.57e-07 3.16e-07 2.71e-07 4.06e-07 5.99e-07 2.93e-07 5.82e-08 5.47e-08 1.71e-07 3.55e-07 1.66e-07 1.64e-07 1.24e-07 7.81e-08 2.22e-08 9.99e-08 5.09e-07 5.09e-08 5.71e-09 1.6e-07 1.46e-08 1.13e-07 2.48e-08 6.04e-08
ENSG00000134698 AGO4 208234 1.91e-06 2.37e-06 3.2e-07 1.69e-06 4.38e-07 8.03e-07 1.31e-06 6.48e-07 1.72e-06 8.51e-07 1.97e-06 1.47e-06 3.2e-06 9.31e-07 5.38e-07 1.31e-06 1.02e-06 1.72e-06 7.13e-07 1.13e-06 1.07e-06 2.32e-06 1.87e-06 9.81e-07 2.62e-06 1.34e-06 1.19e-06 1.37e-06 1.78e-06 1.63e-06 1.06e-06 3.26e-07 4.53e-07 1.25e-06 1.01e-06 8.92e-07 7.95e-07 4.2e-07 1.09e-06 3.75e-07 1.51e-07 2.79e-06 4.86e-07 1.9e-07 3.14e-07 3.26e-07 7.4e-07 2.45e-07 1.79e-07
ENSG00000142686 C1orf216 297356 1.29e-06 9.83e-07 2.56e-07 1.04e-06 3.48e-07 5.88e-07 1.34e-06 3.65e-07 1.4e-06 4.82e-07 1.49e-06 6.31e-07 1.97e-06 2.79e-07 5.58e-07 9.13e-07 8.49e-07 6.91e-07 8.26e-07 6.49e-07 7.49e-07 1.42e-06 8.84e-07 6.31e-07 2.06e-06 6.16e-07 9.05e-07 7.01e-07 1.3e-06 1.26e-06 6.04e-07 2.53e-07 1.88e-07 6.89e-07 5.92e-07 4.36e-07 7.24e-07 2.88e-07 4.99e-07 3.12e-07 2.84e-07 1.47e-06 1.28e-07 9.69e-08 2.95e-07 1.19e-07 2.19e-07 4.82e-08 1.6e-07
ENSG00000142687 KIAA0319L 458300 7.76e-07 4.93e-07 1.31e-07 3.95e-07 1.05e-07 2.24e-07 5.2e-07 1.76e-07 4.3e-07 2.43e-07 5.73e-07 3.5e-07 7.02e-07 1.23e-07 1.9e-07 2.45e-07 3.52e-07 3.95e-07 2.17e-07 1.55e-07 2.52e-07 3.87e-07 3.45e-07 1.76e-07 6.65e-07 2.68e-07 2.72e-07 2.54e-07 3.58e-07 5.28e-07 2.6e-07 6.77e-08 4.49e-08 1.64e-07 3.31e-07 1.36e-07 1.31e-07 1.06e-07 6.74e-08 2.77e-08 8.61e-08 4.42e-07 5.38e-08 1.1e-08 1.48e-07 1.35e-08 1.21e-07 2.31e-08 6.36e-08
ENSG00000239636 AC004865.2 438521 8.25e-07 5.7e-07 1.31e-07 4.32e-07 1.12e-07 2.63e-07 5.49e-07 2.04e-07 5.06e-07 2.8e-07 7.15e-07 3.73e-07 8.16e-07 1.48e-07 2.35e-07 2.89e-07 4.29e-07 4.11e-07 2.65e-07 1.76e-07 2.5e-07 4.14e-07 3.84e-07 2.22e-07 7.71e-07 2.57e-07 3.26e-07 2.63e-07 4.13e-07 6.03e-07 3.1e-07 5.93e-08 5.63e-08 1.67e-07 3.34e-07 1.44e-07 1.83e-07 1.27e-07 7.99e-08 2.26e-08 1.02e-07 5.29e-07 5.84e-08 5.77e-09 1.67e-07 1.5e-08 1.1e-07 3.01e-08 6.23e-08