Genes within 1Mb (chr1:35694473:TG:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000054116 TRAPPC3 -461580 eQTL 2.61e-02 0.029 0.013 0.0 0.0 0.24
ENSG00000092847 AGO1 -175335 eQTL 1.91e-02 -0.0456 0.0194 0.00137 0.0 0.24
ENSG00000092850 TEKT2 -389621 eQTL 2.31e-03 -0.15 0.0492 0.0 0.0 0.24
ENSG00000116544 DLGAP3 764823 eQTL 1.13e-02 0.0683 0.0269 0.0 0.0 0.24
ENSG00000116871 MAP7D1 -461106 eQTL 2.99e-04 0.0536 0.0148 0.0 0.0 0.24
ENSG00000119535 CSF3R -788805 pQTL 2.69e-02 0.0555 0.0251 0.0 0.0 0.246
ENSG00000126067 PSMB2 52947 eQTL 1.94e-02 -0.0313 0.0134 0.0 0.0 0.24
ENSG00000134698 AGO4 -113543 eQTL 4.94e-16 0.0805 0.00975 0.0 0.0 0.24
ENSG00000142686 C1orf216 -24421 eQTL 1.22e-85 0.373 0.0171 0.0 0.0299 0.24
ENSG00000142687 KIAA0319L 136523 eQTL 5.51e-04 0.0454 0.0131 0.0 0.0 0.24
ENSG00000146463 ZMYM4 425506 eQTL 8.01e-08 0.0967 0.0179 0.0 0.0 0.24
ENSG00000163866 SMIM12 834718 eQTL 1.37e-03 0.0921 0.0287 0.0 0.0 0.24
ENSG00000163867 ZMYM6 662528 eQTL 2.16e-02 -0.0379 0.0165 0.0 0.0 0.24
ENSG00000171812 COL8A2 -430749 eQTL 5.06e-06 -0.119 0.0259 0.0 0.0 0.24
ENSG00000187513 GJA4 901474 eQTL 3.32e-02 0.067 0.0314 0.0 0.0 0.24
ENSG00000196182 STK40 -691423 eQTL 2.31e-04 0.0416 0.0112 0.0 0.0 0.24
ENSG00000197056 ZMYM1 662301 eQTL 8.09e-03 0.0492 0.0185 0.0 0.0 0.24
ENSG00000239636 AC004865.2 116744 eQTL 2.63e-50 0.487 0.0308 0.0 0.0 0.24
ENSG00000243749 TMEM35B 709120 eQTL 7.00e-10 0.114 0.0183 0.0 0.0 0.24


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000054118 \N -529959 4.54e-06 3.92e-06 6.05e-07 2.84e-06 4.94e-07 7.8e-07 2.49e-06 6.75e-07 1.71e-06 7.21e-07 3.36e-06 1.37e-06 3.75e-06 1.36e-06 8.27e-07 1.16e-06 1.1e-06 2.23e-06 1.49e-06 6.46e-07 1.39e-06 3.23e-06 2.54e-06 1.06e-06 3.6e-06 1.21e-06 1.15e-06 8.36e-07 2.99e-06 2.93e-06 1.15e-06 3.78e-08 2.79e-07 1.59e-06 1.96e-06 9.52e-07 7.05e-07 2.21e-07 4.73e-07 1.54e-07 1.01e-07 7.45e-06 4.2e-07 3.24e-07 3.6e-07 3.62e-07 2.38e-07 1.24e-08 4.67e-08
ENSG00000116560 \N 501328 4.83e-06 4.57e-06 7.06e-07 3.15e-06 4.77e-07 7.6e-07 2.39e-06 8.2e-07 1.7e-06 7.24e-07 4.02e-06 1.44e-06 4.84e-06 1.42e-06 9.25e-07 1.38e-06 1.41e-06 2.25e-06 1.39e-06 8.01e-07 1.96e-06 3.46e-06 3.01e-06 1.4e-06 4.08e-06 1.24e-06 1.27e-06 1.07e-06 3.85e-06 3.44e-06 1.67e-06 4.77e-08 3.56e-07 1.74e-06 1.96e-06 8.71e-07 7.27e-07 3.1e-07 4.85e-07 2.91e-07 1.67e-07 7.98e-06 5.62e-07 3.99e-07 3.5e-07 3.75e-07 2.6e-07 3.79e-08 4.54e-08
ENSG00000134698 AGO4 -113543 2.47e-05 1.51e-05 1.09e-05 8.26e-06 3.03e-06 5.83e-06 2.11e-05 2.12e-06 1.24e-05 6.01e-06 1.5e-05 7.67e-06 2.44e-05 4.65e-06 5.59e-06 9.02e-06 1.07e-05 1.01e-05 6e-06 3.53e-06 8.21e-06 1.65e-05 1.78e-05 5.03e-06 2.82e-05 5.34e-06 7.67e-06 4.58e-06 1.75e-05 1.5e-05 7.69e-06 9.95e-07 1.24e-06 4.1e-06 6.38e-06 4.06e-06 1.76e-06 2.35e-06 2.08e-06 1.42e-06 1.25e-06 2.7e-05 5.11e-06 4.31e-07 2.07e-06 3.27e-06 2.05e-06 1.3e-06 7.82e-07
ENSG00000142686 C1orf216 -24421 3.86e-05 3.1e-05 7.63e-06 1.35e-05 5.25e-06 1.28e-05 4.36e-05 3.71e-06 2.37e-05 1.13e-05 3.38e-05 1.5e-05 4.8e-05 1e-05 7.4e-06 1.54e-05 1.83e-05 2.14e-05 7.47e-06 5.32e-06 1.27e-05 2.86e-05 3.51e-05 8.57e-06 3.73e-05 7.59e-06 1.05e-05 8.98e-06 3.39e-05 2.15e-05 1.7e-05 1.64e-06 2.42e-06 5.28e-06 9.3e-06 5.23e-06 2.77e-06 2.98e-06 3.71e-06 3.19e-06 1.63e-06 4.48e-05 4.23e-06 2.85e-07 2.07e-06 4.15e-06 3.62e-06 1.45e-06 1.5e-06
ENSG00000142687 KIAA0319L 136523 2.22e-05 1.33e-05 9.31e-06 7.89e-06 2.58e-06 5.16e-06 1.97e-05 1.76e-06 1.06e-05 5.42e-06 1.39e-05 6.94e-06 2.09e-05 4.21e-06 5.23e-06 8.68e-06 8.74e-06 9.67e-06 5.69e-06 3.27e-06 7.79e-06 1.44e-05 1.56e-05 4.94e-06 2.58e-05 5.09e-06 7.13e-06 4.05e-06 1.54e-05 1.38e-05 6.74e-06 9.96e-07 1.21e-06 4.07e-06 5.85e-06 3.89e-06 1.78e-06 2.12e-06 2.15e-06 1.15e-06 1.29e-06 2.34e-05 5.16e-06 4.64e-07 2.01e-06 3.34e-06 1.94e-06 1.06e-06 4.51e-07
ENSG00000142694 \N -629681 4.26e-06 2.44e-06 6.46e-07 2.02e-06 3.83e-07 7.48e-07 1.33e-06 4.28e-07 1.42e-06 4.52e-07 2.48e-06 9.26e-07 2.98e-06 8.66e-07 4.05e-07 9.27e-07 9.77e-07 1.18e-06 6.59e-07 6.43e-07 7.37e-07 2.19e-06 1.54e-06 6.41e-07 2.32e-06 7.8e-07 9.49e-07 7.22e-07 1.77e-06 1.8e-06 8.22e-07 3.87e-08 1.82e-07 1.68e-06 1.9e-06 7.36e-07 5.04e-07 1.13e-07 1.73e-07 2.26e-08 3.24e-08 5.58e-06 5.95e-07 1.58e-07 2.78e-07 3.24e-07 1.97e-07 2.13e-09 4.9e-08
ENSG00000146463 ZMYM4 425506 5.97e-06 5.12e-06 1.36e-06 3.5e-06 1.12e-06 1.17e-06 4.62e-06 9.98e-07 2.37e-06 1.31e-06 5.26e-06 3.21e-06 7.63e-06 1.96e-06 1.42e-06 2.27e-06 2.04e-06 2.7e-06 1.43e-06 1.39e-06 3.15e-06 4.72e-06 3.52e-06 1.36e-06 4.95e-06 1.87e-06 1.79e-06 1.81e-06 4.24e-06 4.4e-06 2.04e-06 7.41e-08 6.11e-07 2.63e-06 2.6e-06 1.18e-06 8.9e-07 4.19e-07 1.11e-06 2.03e-07 2.88e-07 8.05e-06 1.27e-06 5.19e-07 4.86e-07 1.07e-06 8e-07 5.98e-08 6.26e-08
ENSG00000163867 ZMYM6 662528 4e-06 2.46e-06 4.5e-07 1.95e-06 3.44e-07 6.97e-07 1.32e-06 3.75e-07 1.24e-06 3.99e-07 2.11e-06 8.67e-07 2.68e-06 6.86e-07 4.87e-07 8.48e-07 9.17e-07 1.08e-06 5.45e-07 6.76e-07 6.18e-07 1.96e-06 1.4e-06 6.1e-07 2.34e-06 6.9e-07 9.01e-07 5.61e-07 1.62e-06 1.63e-06 8e-07 3.7e-08 1.32e-07 1.32e-06 1.74e-06 6.2e-07 4.73e-07 9.46e-08 1.54e-07 2.59e-08 5.03e-08 5.79e-06 4.81e-07 1.53e-07 2.24e-07 2.32e-07 1.46e-07 1.95e-09 4.81e-08
ENSG00000171812 COL8A2 -430749 6.01e-06 5e-06 1.29e-06 3.48e-06 1.06e-06 1.15e-06 4.48e-06 9.96e-07 2.27e-06 1.2e-06 4.99e-06 2.87e-06 7.42e-06 1.84e-06 1.26e-06 2.07e-06 2e-06 2.46e-06 1.44e-06 1.47e-06 3.06e-06 4.79e-06 3.51e-06 1.4e-06 4.92e-06 1.74e-06 1.77e-06 1.79e-06 4.21e-06 4.27e-06 1.97e-06 7.59e-08 5.68e-07 2.54e-06 2.59e-06 1.18e-06 8.71e-07 4.29e-07 1.03e-06 2.17e-07 2.85e-07 8.16e-06 1.28e-06 5.2e-07 4.38e-07 1.08e-06 7.91e-07 4.79e-08 5.96e-08
ENSG00000239636 AC004865.2 116744 2.43e-05 1.48e-05 1.04e-05 8.21e-06 2.97e-06 5.72e-06 2.08e-05 2.04e-06 1.2e-05 6.02e-06 1.45e-05 7.65e-06 2.38e-05 4.51e-06 5.53e-06 9.01e-06 1.05e-05 1e-05 5.99e-06 3.49e-06 8.13e-06 1.62e-05 1.77e-05 4.98e-06 2.78e-05 5.37e-06 7.53e-06 4.49e-06 1.72e-05 1.49e-05 7.63e-06 1.02e-06 1.22e-06 4.1e-06 6.33e-06 4.01e-06 1.75e-06 2.29e-06 2.03e-06 1.38e-06 1.28e-06 2.65e-05 5.11e-06 4.23e-07 2.04e-06 3.29e-06 2.02e-06 1.3e-06 6.33e-07
ENSG00000243749 TMEM35B 709120 3.47e-06 2.05e-06 3.29e-07 1.96e-06 2.76e-07 6.42e-07 1.26e-06 3.99e-07 1.12e-06 3.64e-07 1.97e-06 6.61e-07 2.73e-06 4.76e-07 5.69e-07 6.89e-07 8.25e-07 9.05e-07 5.81e-07 5.62e-07 7.46e-07 1.88e-06 1.1e-06 6.39e-07 2.42e-06 4.27e-07 7.6e-07 4.77e-07 1.7e-06 1.47e-06 6.68e-07 4.03e-08 4.98e-08 1.25e-06 1.69e-06 5.39e-07 4e-07 6.78e-08 8.61e-08 5.72e-08 6.28e-08 4.9e-06 3.9e-07 1.62e-07 1.74e-07 1.38e-07 1.32e-07 1.88e-09 4.73e-08