Genes within 1Mb (chr1:35692988:T:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000054116 TRAPPC3 -463065 eQTL 2.62e-02 0.029 0.013 0.0 0.0 0.24
ENSG00000092847 AGO1 -176820 eQTL 1.96e-02 -0.0455 0.0194 0.00136 0.0 0.24
ENSG00000092850 TEKT2 -391106 eQTL 2.60e-03 -0.149 0.0493 0.0 0.0 0.24
ENSG00000116544 DLGAP3 763338 eQTL 1.30e-02 0.0671 0.027 0.0 0.0 0.24
ENSG00000116871 MAP7D1 -462591 eQTL 2.79e-04 0.054 0.0148 0.0 0.0 0.24
ENSG00000119535 CSF3R -790290 pQTL 2.87e-02 0.0551 0.0251 0.0 0.0 0.246
ENSG00000126067 PSMB2 51462 eQTL 2.15e-02 -0.0309 0.0134 0.0 0.0 0.24
ENSG00000134698 AGO4 -115028 eQTL 5.00e-16 0.0807 0.00977 0.0 0.0 0.24
ENSG00000142686 C1orf216 -25906 eQTL 1.59e-85 0.373 0.0171 0.0 0.0282 0.24
ENSG00000142687 KIAA0319L 135038 eQTL 5.48e-04 0.0455 0.0131 0.0 0.0 0.24
ENSG00000146463 ZMYM4 424021 eQTL 8.42e-08 0.0968 0.0179 0.0 0.0 0.24
ENSG00000163866 SMIM12 833233 eQTL 1.59e-03 0.091 0.0287 0.0 0.0 0.24
ENSG00000163867 ZMYM6 661043 eQTL 2.19e-02 -0.0379 0.0165 0.0 0.0 0.24
ENSG00000171812 COL8A2 -432234 eQTL 5.57e-06 -0.119 0.026 0.0 0.0 0.24
ENSG00000187513 GJA4 899989 eQTL 3.71e-02 0.0657 0.0315 0.0 0.0 0.24
ENSG00000196182 STK40 -692908 eQTL 3.08e-04 0.0408 0.0113 0.0 0.0 0.24
ENSG00000197056 ZMYM1 660816 eQTL 9.30e-03 0.0484 0.0186 0.0 0.0 0.24
ENSG00000239636 AC004865.2 115259 eQTL 2.34e-50 0.488 0.0308 0.0 0.0 0.24
ENSG00000243749 TMEM35B 707635 eQTL 7.21e-10 0.114 0.0183 0.0 0.0 0.24


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116560 \N 499843 7.74e-07 3.55e-07 9.89e-08 2.96e-07 9.26e-08 1.64e-07 4.68e-07 1.31e-07 3.94e-07 2.14e-07 4.88e-07 3.48e-07 6.08e-07 1.07e-07 1.71e-07 2.14e-07 2.11e-07 3.67e-07 1.77e-07 1.31e-07 1.86e-07 3.15e-07 3.07e-07 1.29e-07 5.75e-07 2.39e-07 2.52e-07 2.18e-07 3e-07 3.8e-07 2.31e-07 7.71e-08 5.58e-08 1.39e-07 2.58e-07 8.17e-08 9.77e-08 6.89e-08 4.11e-08 5.12e-08 7.96e-08 3.55e-07 1.67e-08 1.14e-08 1.01e-07 1.75e-08 7.89e-08 3.09e-09 5.05e-08
ENSG00000134698 AGO4 -115028 4.65e-06 4.67e-06 6.91e-07 2.59e-06 1.66e-06 1.55e-06 4.27e-06 1.11e-06 5.12e-06 2.42e-06 4.96e-06 3.37e-06 7.07e-06 2.38e-06 1.35e-06 3.81e-06 1.92e-06 3.51e-06 1.55e-06 1.21e-06 3.07e-06 4.72e-06 4.46e-06 1.81e-06 5.75e-06 1.96e-06 2.55e-06 1.78e-06 4.41e-06 4.36e-06 2.53e-06 4.18e-07 7.03e-07 2.16e-06 2.19e-06 1.12e-06 1.07e-06 4.58e-07 9.13e-07 6.06e-07 8.6e-07 5.47e-06 3.65e-07 1.53e-07 7.17e-07 9.32e-07 1.11e-06 6.6e-07 5.12e-07
ENSG00000142686 C1orf216 -25906 1.3e-05 1.3e-05 3.05e-06 9.13e-06 3.28e-06 7.14e-06 2.06e-05 3.36e-06 1.48e-05 7.3e-06 1.82e-05 7.34e-06 2.71e-05 5.36e-06 4.76e-06 9.44e-06 8.2e-06 1.41e-05 5.66e-06 4.89e-06 8.4e-06 1.39e-05 1.57e-05 7.31e-06 2.54e-05 5.6e-06 7.58e-06 6.65e-06 1.75e-05 2.03e-05 9.59e-06 1.65e-06 2.35e-06 6.69e-06 6.68e-06 4.59e-06 3.09e-06 2.79e-06 4.29e-06 3.08e-06 1.77e-06 1.79e-05 2.48e-06 4.64e-07 2.16e-06 2.75e-06 3.25e-06 1.4e-06 1.51e-06
ENSG00000142687 KIAA0319L 135038 4.12e-06 3.84e-06 8.49e-07 2.02e-06 1.38e-06 9.7e-07 2.93e-06 9.96e-07 3.58e-06 1.94e-06 4.02e-06 2.85e-06 6.58e-06 1.37e-06 1.36e-06 2.68e-06 1.83e-06 2.72e-06 1.37e-06 9.46e-07 2.61e-06 4.1e-06 3.39e-06 1.39e-06 4.83e-06 1.52e-06 2.27e-06 1.45e-06 4.38e-06 3.62e-06 2.01e-06 5.25e-07 6.11e-07 1.44e-06 1.92e-06 8.84e-07 9.63e-07 4.92e-07 8.94e-07 4.08e-07 7.46e-07 4.34e-06 4.65e-07 1.8e-07 5.95e-07 3.93e-07 8.71e-07 4.25e-07 3.29e-07
ENSG00000142694 \N -631166 3.77e-07 1.78e-07 6.99e-08 2.25e-07 1.03e-07 9.31e-08 2.86e-07 7.56e-08 2.04e-07 1.21e-07 2.18e-07 1.82e-07 3.04e-07 8.66e-08 7.79e-08 1.14e-07 6.63e-08 2.56e-07 7.76e-08 7.05e-08 1.33e-07 2.09e-07 1.86e-07 3.83e-08 2.74e-07 1.82e-07 1.31e-07 1.44e-07 1.48e-07 1.59e-07 1.35e-07 4.93e-08 4.27e-08 9.81e-08 6.78e-08 4.6e-08 4.84e-08 7.25e-08 5.59e-08 7.17e-08 5.03e-08 1.64e-07 3.08e-08 7.43e-09 3.71e-08 6.98e-09 8.21e-08 2.16e-09 4.55e-08
ENSG00000146463 ZMYM4 424021 1.01e-06 6.26e-07 1.55e-07 3.95e-07 9.93e-08 2.54e-07 6.02e-07 2.04e-07 6.62e-07 2.98e-07 9.39e-07 5.01e-07 9.65e-07 1.6e-07 3.13e-07 3.57e-07 4.87e-07 4.39e-07 2.79e-07 1.87e-07 2.51e-07 5.2e-07 4.01e-07 2.7e-07 9.71e-07 2.64e-07 4.16e-07 3.24e-07 5.16e-07 6.73e-07 3.67e-07 6.37e-08 5.3e-08 1.93e-07 3.55e-07 1.55e-07 1.1e-07 1.06e-07 7.81e-08 1.6e-08 1.14e-07 6.19e-07 4.53e-08 1.84e-08 1.69e-07 1.44e-08 1.1e-07 2.28e-08 6.04e-08
ENSG00000163867 ZMYM6 661043 3.62e-07 1.67e-07 6.72e-08 2.27e-07 1.07e-07 7.75e-08 2.5e-07 6.75e-08 1.96e-07 1.11e-07 2.04e-07 1.57e-07 2.55e-07 8.44e-08 6.6e-08 1.06e-07 5.57e-08 2.21e-07 7.27e-08 6.16e-08 1.27e-07 1.9e-07 1.73e-07 4.15e-08 2.36e-07 1.71e-07 1.29e-07 1.36e-07 1.36e-07 1.38e-07 1.26e-07 4.23e-08 4.23e-08 1.01e-07 5.65e-08 3.43e-08 4.47e-08 7.49e-08 6.45e-08 6.55e-08 4.58e-08 1.55e-07 3.4e-08 7.78e-09 3.3e-08 6.53e-09 7.13e-08 2.07e-09 4.72e-08
ENSG00000171812 COL8A2 -432234 9.47e-07 6.07e-07 1.5e-07 3.92e-07 1.04e-07 2.42e-07 5.9e-07 2e-07 6.27e-07 2.87e-07 8.58e-07 4.75e-07 9.37e-07 1.6e-07 3.1e-07 3.35e-07 4.54e-07 4.33e-07 2.57e-07 2.02e-07 2.48e-07 4.81e-07 4.12e-07 2.39e-07 9.15e-07 2.49e-07 3.93e-07 2.98e-07 4.88e-07 6.35e-07 3.49e-07 6.84e-08 5.78e-08 1.79e-07 3.52e-07 1.61e-07 8.6e-08 9.71e-08 7.54e-08 2.28e-08 1.01e-07 6.15e-07 4.36e-08 1.79e-08 1.58e-07 1.39e-08 1.23e-07 1.77e-08 6.17e-08
ENSG00000239636 AC004865.2 115259 4.65e-06 4.67e-06 7.11e-07 2.59e-06 1.62e-06 1.53e-06 4.31e-06 1.09e-06 5.12e-06 2.42e-06 4.96e-06 3.31e-06 7.07e-06 2.35e-06 1.39e-06 3.83e-06 1.92e-06 3.51e-06 1.55e-06 1.21e-06 3.07e-06 4.79e-06 4.46e-06 1.81e-06 5.59e-06 2.01e-06 2.55e-06 1.78e-06 4.47e-06 4.33e-06 2.54e-06 4.18e-07 6.85e-07 2.16e-06 2.23e-06 1.12e-06 1.04e-06 4.24e-07 9.13e-07 6.06e-07 8.74e-07 5.47e-06 3.65e-07 1.53e-07 7.17e-07 9.32e-07 1.12e-06 6.6e-07 5.44e-07
ENSG00000243749 TMEM35B 707635 3.1e-07 1.51e-07 6.57e-08 2.15e-07 1.05e-07 8.63e-08 2.16e-07 5.89e-08 1.86e-07 1.03e-07 1.76e-07 1.46e-07 2.38e-07 8.07e-08 5.97e-08 9.48e-08 4.25e-08 1.91e-07 7.29e-08 5.75e-08 1.18e-07 1.7e-07 1.68e-07 3.59e-08 2.17e-07 1.51e-07 1.23e-07 1.17e-07 1.37e-07 1.17e-07 1.21e-07 3.78e-08 3.46e-08 9.52e-08 3.97e-08 3.05e-08 4.49e-08 8.2e-08 6.62e-08 5.56e-08 6.21e-08 1.55e-07 4.83e-08 1.3e-08 3.32e-08 1.19e-08 7.83e-08 1.96e-09 4.94e-08