Genes within 1Mb (chr1:35654789:A:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000054116 TRAPPC3 -501264 eQTL 3.21e-03 -0.0375 0.0127 0.0 0.0 0.27
ENSG00000092847 AGO1 -215019 eQTL 2.57e-02 0.0424 0.019 0.0012 0.0 0.27
ENSG00000092850 TEKT2 -429305 eQTL 6.15e-03 0.132 0.0482 0.0 0.0 0.27
ENSG00000116819 TFAP2E 81475 eQTL 1.68e-01 -0.0387 0.028 0.0 0.00261 0.27
ENSG00000116871 MAP7D1 -500790 eQTL 4.62e-03 -0.0411 0.0145 0.0 0.0 0.27
ENSG00000119535 CSF3R -828489 pQTL 6.98e-03 -0.067 0.0248 0.0 0.0 0.272
ENSG00000126067 PSMB2 13263 eQTL 2.71e-08 0.0723 0.0129 0.0 0.0 0.27
ENSG00000134698 AGO4 -153227 eQTL 5.28e-18 -0.0837 0.00948 0.0 0.0 0.27
ENSG00000142686 C1orf216 -64105 eQTL 1.46e-70 -0.335 0.0173 0.0 0.0 0.27
ENSG00000142687 KIAA0319L 96839 eQTL 1.07e-04 -0.0497 0.0128 0.0 0.0 0.27
ENSG00000146463 ZMYM4 385822 eQTL 5.66e-09 -0.102 0.0174 0.0 0.0 0.27
ENSG00000163866 SMIM12 795034 eQTL 4.09e-03 -0.0807 0.028 0.0 0.0 0.27
ENSG00000171812 COL8A2 -470433 eQTL 8.32e-07 0.125 0.0253 0.0 0.0 0.27
ENSG00000196182 STK40 -731107 eQTL 5.95e-06 -0.0498 0.0109 0.00302 0.00594 0.27
ENSG00000197056 ZMYM1 622617 eQTL 7.72e-03 -0.0484 0.0181 0.00111 0.0 0.27
ENSG00000239636 AC004865.2 77060 eQTL 1.26e-56 -0.502 0.0296 0.0 0.0 0.27
ENSG00000243749 TMEM35B 669436 eQTL 2.49e-10 -0.114 0.0178 0.0 0.0 0.27


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000126067 PSMB2 13263 2.26e-05 2.43e-05 4.26e-06 1.29e-05 3.92e-06 1.05e-05 3.16e-05 3.69e-06 2.03e-05 1.02e-05 2.74e-05 1.06e-05 3.74e-05 9.56e-06 5.45e-06 1.2e-05 1.2e-05 1.87e-05 6.27e-06 5.35e-06 9.96e-06 2.24e-05 2.29e-05 7.43e-06 3.26e-05 5.98e-06 8.66e-06 8.88e-06 2.39e-05 2.25e-05 1.35e-05 1.65e-06 2.23e-06 6.01e-06 8.98e-06 4.55e-06 2.68e-06 2.86e-06 3.81e-06 2.88e-06 1.67e-06 2.84e-05 2.67e-06 3.24e-07 2.06e-06 2.87e-06 3.33e-06 1.5e-06 1.32e-06
ENSG00000134698 AGO4 -153227 3.39e-06 2.6e-06 2.97e-07 1.88e-06 4.37e-07 8.21e-07 1.88e-06 5.72e-07 1.68e-06 7.73e-07 2.46e-06 1.31e-06 3.23e-06 1.31e-06 4.97e-07 1.19e-06 1.09e-06 1.89e-06 5.66e-07 8.01e-07 7.69e-07 2.61e-06 2.23e-06 9.38e-07 3.53e-06 1.2e-06 1.22e-06 1.32e-06 1.91e-06 1.86e-06 1.64e-06 2.49e-07 3.72e-07 1.22e-06 1e-06 6.76e-07 6.94e-07 3.45e-07 7.18e-07 2.17e-07 3.56e-07 3.49e-06 4.37e-07 1.32e-07 3.7e-07 3.14e-07 3.77e-07 2.23e-07 2.03e-07
ENSG00000142686 C1orf216 -64105 7.25e-06 8.73e-06 6.54e-07 3.81e-06 1.47e-06 2.48e-06 9.22e-06 1.24e-06 4.75e-06 3.16e-06 8.89e-06 3.14e-06 1.11e-05 2.81e-06 9.83e-07 4.19e-06 3.61e-06 3.78e-06 1.58e-06 1.72e-06 2.66e-06 7e-06 5.53e-06 2.01e-06 9.83e-06 2.18e-06 2.92e-06 1.71e-06 6.73e-06 7.35e-06 3.57e-06 4.16e-07 6.95e-07 2.43e-06 2.22e-06 1.25e-06 1.07e-06 4.51e-07 9.34e-07 6.17e-07 6.37e-07 8.29e-06 6.85e-07 1.82e-07 7.89e-07 1.07e-06 1.16e-06 7.05e-07 4.39e-07
ENSG00000142687 KIAA0319L 96839 4.81e-06 4.88e-06 7.57e-07 2.79e-06 1.12e-06 1.57e-06 4.48e-06 1.01e-06 4.4e-06 2.01e-06 4.99e-06 3.36e-06 6.97e-06 2.33e-06 1.4e-06 2.57e-06 2.07e-06 2.96e-06 1.36e-06 9.52e-07 2.35e-06 4.49e-06 4.02e-06 1.65e-06 6.41e-06 1.38e-06 2.43e-06 1.43e-06 4.26e-06 4.23e-06 2.72e-06 4.56e-07 7.34e-07 1.86e-06 1.97e-06 8.52e-07 9.22e-07 4.52e-07 1.19e-06 3.63e-07 2.08e-07 5.76e-06 3.82e-07 1.96e-07 3.34e-07 3.75e-07 6.63e-07 2.38e-07 1.57e-07
ENSG00000142694 \N -669365 3.14e-07 1.5e-07 4.69e-08 2.05e-07 9.87e-08 8.45e-08 1.81e-07 5.75e-08 1.45e-07 6.08e-08 1.73e-07 1.08e-07 1.87e-07 7.64e-08 6.25e-08 7.23e-08 4.18e-08 1.44e-07 6.07e-08 4.89e-08 1.25e-07 1.25e-07 1.58e-07 3.17e-08 1.72e-07 1.25e-07 1.18e-07 1.01e-07 1.24e-07 9.88e-08 1.08e-07 2.99e-08 4.02e-08 9.3e-08 2.97e-08 3.04e-08 5.8e-08 8.63e-08 6.43e-08 3.82e-08 5.45e-08 1.5e-07 4.7e-08 1.2e-08 3.4e-08 1.65e-08 1.2e-07 1.89e-09 5.02e-08
ENSG00000146463 ZMYM4 385822 1.09e-06 6.56e-07 8.83e-08 4.04e-07 9.72e-08 2.08e-07 5.82e-07 1.37e-07 3.94e-07 2.26e-07 6.56e-07 3.5e-07 8.6e-07 1.41e-07 1.68e-07 2.14e-07 3.35e-07 3.73e-07 1.62e-07 1.31e-07 1.91e-07 3.76e-07 3.77e-07 1.44e-07 8.33e-07 2.46e-07 2.58e-07 2.44e-07 3.86e-07 4.9e-07 2.83e-07 7.49e-08 5.58e-08 1.57e-07 3.34e-07 6.73e-08 1.06e-07 6.67e-08 3.82e-08 5.77e-08 4.27e-08 6.19e-07 4.41e-08 1.85e-08 1.01e-07 1.29e-08 7.89e-08 3.35e-09 5.49e-08
ENSG00000171812 COL8A2 -470433 7.3e-07 3.47e-07 6.86e-08 2.87e-07 1.07e-07 1.26e-07 3.94e-07 8.11e-08 2.26e-07 1.37e-07 2.98e-07 1.96e-07 4.74e-07 8.85e-08 8.45e-08 1.17e-07 9.53e-08 2.83e-07 7.76e-08 8.69e-08 1.39e-07 2.24e-07 2.33e-07 5.6e-08 4.11e-07 1.76e-07 1.57e-07 1.54e-07 1.98e-07 2.01e-07 1.76e-07 5.32e-08 4.97e-08 1.23e-07 1.67e-07 4.6e-08 6.2e-08 6.98e-08 4.99e-08 8.34e-08 5.04e-08 3.06e-07 2.32e-08 1.14e-08 5.32e-08 8.94e-09 9.1e-08 0.0 4.97e-08
ENSG00000196182 STK40 -731107 2.91e-07 1.36e-07 4.08e-08 1.89e-07 9.24e-08 9.91e-08 1.67e-07 5.53e-08 1.45e-07 5.42e-08 1.52e-07 9.19e-08 1.69e-07 7.37e-08 5.91e-08 7.49e-08 4.01e-08 1.33e-07 5.75e-08 4.23e-08 1.21e-07 1.24e-07 1.44e-07 2.64e-08 1.63e-07 1.14e-07 1.07e-07 9.74e-08 1.2e-07 1.07e-07 1.02e-07 3.08e-08 3.66e-08 8.56e-08 4.92e-08 3.65e-08 5.29e-08 9.3e-08 6.59e-08 3.86e-08 5.14e-08 1.46e-07 5.08e-08 1.52e-08 4.67e-08 1.89e-08 1.19e-07 1.88e-09 4.9e-08
ENSG00000239636 AC004865.2 77060 5.83e-06 6.3e-06 6.71e-07 3.6e-06 1.57e-06 1.52e-06 7.69e-06 1.05e-06 4.98e-06 2.73e-06 7.16e-06 3.22e-06 9.33e-06 1.79e-06 1.27e-06 3.81e-06 2.2e-06 4.02e-06 1.55e-06 1.15e-06 2.8e-06 5.26e-06 4.7e-06 1.55e-06 8.71e-06 1.97e-06 2.31e-06 1.75e-06 5.08e-06 5.45e-06 2.56e-06 5.25e-07 5.47e-07 1.82e-06 2.04e-06 1.11e-06 9.83e-07 4.24e-07 8.26e-07 4.23e-07 4.51e-07 7.99e-06 4.9e-07 1.87e-07 4.86e-07 1.03e-06 9.75e-07 4.43e-07 3.53e-07
ENSG00000243749 TMEM35B 669436 3.14e-07 1.5e-07 4.69e-08 2.05e-07 9.87e-08 8.45e-08 1.81e-07 5.75e-08 1.45e-07 6.08e-08 1.73e-07 1.08e-07 1.87e-07 7.64e-08 6.25e-08 7.23e-08 4.18e-08 1.44e-07 6.07e-08 4.78e-08 1.25e-07 1.25e-07 1.58e-07 3.17e-08 1.72e-07 1.25e-07 1.18e-07 1.01e-07 1.24e-07 9.88e-08 1.08e-07 2.99e-08 4.02e-08 9.3e-08 2.97e-08 3.04e-08 5.8e-08 8.63e-08 6.43e-08 3.82e-08 5.45e-08 1.5e-07 4.7e-08 1.2e-08 3.4e-08 1.65e-08 1.2e-07 1.89e-09 5.02e-08