Genes within 1Mb (chr1:35098876:A:ACT):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000092850 TEKT2 -985218 eQTL 1.16e-14 -0.367 0.0468 0.0 0.0 0.278
ENSG00000116544 DLGAP3 169226 eQTL 2.17e-03 -0.0806 0.0262 0.00153 0.0 0.278
ENSG00000116560 SFPQ -94269 eQTL 7.75e-05 0.0497 0.0125 0.00244 0.00151 0.278
ENSG00000116819 TFAP2E -474438 eQTL 3.73e-03 0.0812 0.0279 0.0 0.0 0.278
ENSG00000142687 KIAA0319L -459074 eQTL 3.01e-07 0.0655 0.0127 0.0 0.0 0.278
ENSG00000163867 ZMYM6 66931 eQTL 5.83e-04 0.0553 0.016 0.0 0.0 0.278
ENSG00000187513 GJA4 305877 eQTL 1.48e-02 0.0749 0.0307 0.0 0.0 0.278
ENSG00000197056 ZMYM1 66704 eQTL 1.21e-07 -0.0955 0.0179 0.00523 0.015 0.278
ENSG00000239636 AC004865.2 -478853 eQTL 2.86e-16 -0.272 0.0326 0.0 0.0 0.278
ENSG00000243749 TMEM35B 113523 eQTL 2.76e-24 -0.18 0.0172 0.0 0.0 0.278


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000092850 TEKT2 -985218 3.1e-07 1.3e-07 8.02e-08 1.89e-07 9.01e-08 1.25e-07 1.73e-07 5.49e-08 1.5e-07 4.57e-08 1.54e-07 8.59e-08 1.59e-07 6.21e-08 5.4e-08 7.3e-08 4.63e-08 1.33e-07 7.53e-08 4.42e-08 1.19e-07 1.31e-07 1.45e-07 2.93e-08 1.37e-07 1.21e-07 1.06e-07 9.57e-08 1.22e-07 1.06e-07 9.73e-08 3.72e-08 3.56e-08 8.25e-08 7.51e-08 3.14e-08 5.08e-08 8.68e-08 7.63e-08 3.71e-08 2.99e-08 1.33e-07 4.83e-08 1.68e-07 8.16e-08 1.83e-08 1.22e-07 4.5e-09 4.81e-08
ENSG00000116560 SFPQ -94269 3.36e-05 1.26e-05 3.51e-06 6.18e-06 2.32e-06 7.21e-06 1.99e-05 1.51e-06 1.05e-05 5.12e-06 1.24e-05 5.31e-06 1.81e-05 3.69e-06 4.27e-06 6.97e-06 5.65e-06 9.66e-06 2.74e-06 2.84e-06 6.11e-06 1.22e-05 1.39e-05 3.39e-06 1.55e-05 4.41e-06 5.83e-06 4.45e-06 1.49e-05 9.19e-06 5.43e-06 8.22e-07 2.56e-06 3.78e-06 4.6e-06 2.63e-06 1.41e-06 2.06e-06 2.15e-06 9.9e-07 9.41e-07 2.02e-05 3.63e-06 2.62e-07 6.87e-07 1.67e-06 1.94e-06 6.91e-07 5.61e-07
ENSG00000142687 KIAA0319L -459074 1.29e-06 8.47e-07 3.1e-07 3.25e-07 1.11e-07 6.28e-07 8.73e-07 8.37e-08 1.08e-06 2.62e-07 9e-07 5.08e-07 1.35e-06 1.17e-07 2.35e-07 3.68e-07 2.48e-07 5.27e-07 8.61e-07 2.63e-07 2.93e-07 1.01e-06 5.67e-07 3.62e-07 8.33e-07 2.52e-07 3.68e-07 3.78e-07 8.56e-07 1e-06 2.6e-07 4.32e-08 3.44e-07 3.17e-07 3.61e-07 4.47e-07 2.79e-07 2.71e-07 3.82e-08 1.8e-08 4.89e-08 8.03e-07 4.96e-07 2.03e-07 8.59e-08 4.28e-08 1.19e-07 3.04e-09 2.87e-07
ENSG00000197056 ZMYM1 66704 4.35e-05 1.87e-05 4.84e-06 8.45e-06 2.51e-06 1.07e-05 2.62e-05 2.14e-06 1.51e-05 6.01e-06 1.67e-05 6.53e-06 2.44e-05 5.28e-06 5.23e-06 9.37e-06 8.68e-06 1.32e-05 3.59e-06 3.53e-06 7.19e-06 1.67e-05 1.98e-05 4.68e-06 2.44e-05 5e-06 7.68e-06 5.54e-06 2.07e-05 1.27e-05 8.68e-06 9.86e-07 2.68e-06 4.69e-06 5.77e-06 2.85e-06 1.76e-06 2.33e-06 2.46e-06 1.56e-06 1.21e-06 2.78e-05 4.22e-06 2.81e-07 9.29e-07 1.72e-06 2.62e-06 7.51e-07 8.17e-07
ENSG00000239636 AC004865.2 -478853 1.2e-06 6.99e-07 2.46e-07 4.55e-07 1.1e-07 6.09e-07 7.54e-07 7.65e-08 8.7e-07 2.34e-07 7.32e-07 4.31e-07 1.15e-06 1.07e-07 1.71e-07 2.89e-07 1.73e-07 5.16e-07 8.01e-07 2.02e-07 2.62e-07 8.58e-07 4.77e-07 3.24e-07 6.87e-07 2.54e-07 3.04e-07 3.18e-07 7.61e-07 9.2e-07 2.19e-07 3.6e-08 2.75e-07 2.31e-07 3.48e-07 3.71e-07 1.97e-07 2.31e-07 5.54e-08 8.29e-09 5.1e-08 7.36e-07 3.86e-07 2.07e-07 6.59e-08 2.71e-08 1.21e-07 0.0 1.97e-07
ENSG00000243749 TMEM35B 113523 2.34e-05 9.95e-06 3.02e-06 4.6e-06 2.43e-06 5.89e-06 1.38e-05 1.18e-06 8.98e-06 4.26e-06 1.05e-05 4.5e-06 1.39e-05 3.91e-06 3.46e-06 6.58e-06 3.81e-06 7.55e-06 2.5e-06 2.85e-06 4.99e-06 1.04e-05 1.05e-05 3.35e-06 1.22e-05 3.09e-06 4.69e-06 3.25e-06 1.18e-05 7.92e-06 4.16e-06 5.85e-07 2.39e-06 3.57e-06 3.56e-06 2.28e-06 1.35e-06 1.93e-06 1.42e-06 1.02e-06 1.01e-06 1.67e-05 3.39e-06 2.64e-07 7.34e-07 1.48e-06 1.73e-06 6.58e-07 5.01e-07