Genes within 1Mb (chr1:34887051:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000092853 CLSPN -882927 eQTL 5.77e-02 0.0282 0.0149 0.00105 0.0 0.263
ENSG00000116544 DLGAP3 -42599 eQTL 3.60e-07 -0.141 0.0275 0.0 0.0 0.263
ENSG00000126067 PSMB2 -754475 eQTL 1.28e-02 0.0344 0.0138 0.0 0.0 0.263
ENSG00000134698 AGO4 -920965 eQTL 1.54e-02 -0.0252 0.0104 0.0 0.0 0.263
ENSG00000142686 C1orf216 -831843 eQTL 5.42e-04 -0.0746 0.0215 0.0 0.0 0.263
ENSG00000163866 SMIM12 27296 eQTL 7.11e-13 -0.211 0.029 0.0 0.0 0.263
ENSG00000187513 GJA4 94052 eQTL 1.20e-06 -0.157 0.0321 0.0 0.0 0.263
ENSG00000230163 AL122010.1 36357 eQTL 1.50e-04 0.145 0.0381 0.0196 0.0297 0.263
ENSG00000239636 AC004865.2 -690678 eQTL 2.08e-02 -0.0825 0.0356 0.0 0.0 0.263
ENSG00000243749 TMEM35B -98302 eQTL 3.05e-02 -0.0416 0.0192 0.0 0.0 0.263


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116544 DLGAP3 -42599 7.78e-06 1.04e-05 1.44e-06 6.04e-06 1.83e-06 4.19e-06 1.02e-05 1.68e-06 8.38e-06 5.08e-06 1.21e-05 4.93e-06 1.51e-05 3.7e-06 2.21e-06 5.94e-06 3.91e-06 6.22e-06 2.63e-06 2.82e-06 4.39e-06 8.06e-06 6.94e-06 2.78e-06 1.36e-05 2.58e-06 4.56e-06 3.07e-06 9.57e-06 8e-06 5.43e-06 5.77e-07 6.72e-07 2.89e-06 4.54e-06 2.07e-06 1.35e-06 1.43e-06 1.57e-06 9.96e-07 6.55e-07 1.25e-05 8.57e-07 1.64e-07 7.84e-07 1.22e-06 9.12e-07 6.09e-07 5.08e-07
ENSG00000126067 PSMB2 -754475 2.67e-07 1.3e-07 5.49e-08 1.9e-07 8.92e-08 1e-07 1.49e-07 5.33e-08 1.41e-07 4.4e-08 1.6e-07 7.75e-08 1.41e-07 6.56e-08 5.84e-08 7.17e-08 4.48e-08 1.21e-07 5.75e-08 4.21e-08 1.05e-07 1.27e-07 1.32e-07 3.68e-08 1.37e-07 1.15e-07 1.07e-07 9.15e-08 1.05e-07 1.1e-07 9.91e-08 4.03e-08 3.26e-08 8.44e-08 4.84e-08 3.76e-08 5.11e-08 9.25e-08 6.78e-08 3.05e-08 4.63e-08 1.35e-07 5.24e-08 1.92e-08 7.26e-08 1.83e-08 1.22e-07 4.04e-09 4.79e-08
ENSG00000142686 C1orf216 -831843 2.74e-07 1.19e-07 4.91e-08 1.86e-07 9.02e-08 9.61e-08 1.42e-07 5.49e-08 1.4e-07 4.38e-08 1.56e-07 8.03e-08 1.41e-07 6.38e-08 5.55e-08 7.5e-08 4.63e-08 1.14e-07 5.39e-08 4.03e-08 1.04e-07 1.26e-07 1.26e-07 4.16e-08 1.33e-07 1.15e-07 1.08e-07 8.71e-08 1.02e-07 1.11e-07 9.73e-08 3.71e-08 2.92e-08 8.49e-08 7.36e-08 3.97e-08 5.01e-08 9.61e-08 7.52e-08 3.09e-08 4.19e-08 1.33e-07 4.52e-08 1.77e-08 7.91e-08 1.66e-08 1.25e-07 4.2e-09 4.91e-08
ENSG00000146463 \N -381916 9.14e-07 5.67e-07 1.23e-07 4.36e-07 1.03e-07 1.97e-07 4.93e-07 7.65e-08 2.76e-07 1.39e-07 4.88e-07 1.82e-07 6.77e-07 1.1e-07 1.07e-07 1.49e-07 9.3e-08 3.3e-07 1.69e-07 8.39e-08 1.52e-07 2.76e-07 2.33e-07 1.15e-07 6.59e-07 1.65e-07 2.57e-07 1.54e-07 2.13e-07 3.71e-07 2.11e-07 5.54e-08 5.07e-08 1.16e-07 3.47e-07 5.2e-08 1.1e-07 6.97e-08 5.86e-08 6.67e-08 4.73e-08 4.68e-07 2.16e-08 4.23e-08 3.66e-08 1.32e-08 9.07e-08 0.0 4.47e-08
ENSG00000163866 SMIM12 27296 1.08e-05 1.48e-05 2.47e-06 8.87e-06 2.58e-06 5.91e-06 1.59e-05 2.16e-06 1.27e-05 6.52e-06 1.75e-05 6.65e-06 2.5e-05 5.09e-06 3.71e-06 7.26e-06 6.42e-06 9.77e-06 3.56e-06 3.27e-06 6.5e-06 1.18e-05 1.13e-05 3.58e-06 2.31e-05 4.34e-06 7.13e-06 5.13e-06 1.48e-05 1.28e-05 9.19e-06 1.02e-06 1.11e-06 3.63e-06 6.13e-06 2.88e-06 1.85e-06 1.99e-06 2.06e-06 1.42e-06 1.02e-06 1.73e-05 1.48e-06 1.76e-07 7.53e-07 1.76e-06 1.8e-06 7.39e-07 4.9e-07
ENSG00000187513 GJA4 94052 4.26e-06 4.86e-06 8.3e-07 2.63e-06 5.79e-07 1.33e-06 3e-06 9.86e-07 3.17e-06 1.7e-06 4.71e-06 2.51e-06 7.55e-06 2.16e-06 9.69e-07 2e-06 1.63e-06 2.79e-06 1.42e-06 1.05e-06 1.39e-06 3.74e-06 3.42e-06 1.62e-06 5.2e-06 1.03e-06 2e-06 1.77e-06 4.1e-06 3.62e-06 1.94e-06 3.28e-07 6e-07 1.83e-06 2.26e-06 9.52e-07 8.71e-07 4.09e-07 1.31e-06 3.46e-07 3.05e-07 5.49e-06 6.49e-07 1.93e-07 3.68e-07 3.58e-07 8.29e-07 2.33e-07 1.58e-07
ENSG00000189280 \N 132004 3.16e-06 3.13e-06 3.67e-07 1.97e-06 4.27e-07 7.53e-07 1.8e-06 5.85e-07 1.69e-06 7.36e-07 2.48e-06 1.44e-06 3.61e-06 1.35e-06 4.97e-07 1.15e-06 1.01e-06 2.04e-06 6.96e-07 8.01e-07 6.41e-07 2.34e-06 1.75e-06 9.74e-07 3.74e-06 8.9e-07 1.34e-06 1.06e-06 1.89e-06 1.9e-06 1.67e-06 2.43e-07 3.99e-07 1.2e-06 1.63e-06 6.69e-07 6.89e-07 3.46e-07 7.38e-07 2.33e-07 2.71e-07 3.4e-06 4.26e-07 1.99e-07 2.83e-07 3.22e-07 2.69e-07 1.43e-07 2.86e-07
ENSG00000230163 AL122010.1 36357 8.82e-06 1.24e-05 1.98e-06 6.84e-06 2.25e-06 4.74e-06 1.13e-05 1.92e-06 1e-05 5.34e-06 1.38e-05 5.61e-06 1.85e-05 3.8e-06 2.73e-06 6.44e-06 4.55e-06 7.79e-06 2.82e-06 2.77e-06 4.98e-06 9.58e-06 7.98e-06 3.21e-06 1.7e-05 3.11e-06 4.93e-06 3.81e-06 1.16e-05 9.42e-06 6.68e-06 8.78e-07 1.12e-06 3.24e-06 5.03e-06 2.56e-06 1.64e-06 1.9e-06 1.89e-06 1.01e-06 7.78e-07 1.37e-05 1.28e-06 1.75e-07 7.84e-07 1.63e-06 1.27e-06 6.83e-07 4.39e-07