Genes within 1Mb (chr1:33159099:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116497 S100PBP 342332 eQTL 1.06e-05 -0.0724 0.0164 0.0 0.0 0.184
ENSG00000116514 RNF19B 194414 eQTL 1.72e-04 0.0794 0.0211 0.0 0.0 0.184
ENSG00000121900 TMEM54 257661 eQTL 3.99e-02 0.0721 0.0351 0.0 0.0 0.184
ENSG00000134686 PHC2 -271953 eQTL 6.40e-04 -0.0353 0.0103 0.00563 0.00432 0.184
ENSG00000142920 AZIN2 77995 eQTL 3.92e-03 0.076 0.0263 0.0 0.0 0.184
ENSG00000160094 ZNF362 -97393 eQTL 1.80e-10 -0.14 0.0216 0.0 0.0 0.184
ENSG00000162520 SYNC 455503 eQTL 2.69e-02 -0.0867 0.0391 0.0 0.0 0.184
ENSG00000162522 KIAA1522 417269 eQTL 3.03e-07 -0.189 0.0367 0.0 0.0 0.184
ENSG00000162526 TSSK3 807578 eQTL 4.88e-03 0.119 0.0422 0.00154 0.00119 0.184
ENSG00000184389 A3GALT2 -161999 eQTL 4.09e-11 0.242 0.0362 0.0 0.0 0.184
ENSG00000220785 MTMR9LP 917479 eQTL 4.68e-02 0.0993 0.0499 0.0 0.0 0.184
ENSG00000222046 DCDC2B 950005 eQTL 1.15e-02 0.0816 0.0322 0.00119 0.0 0.184
ENSG00000222112 RN7SKP16 -177765 eQTL 1.08e-02 -0.0765 0.0299 0.0 0.0 0.184
ENSG00000225313 AL513327.1 -148249 eQTL 6.19e-02 0.0347 0.0186 0.00149 0.0 0.184
ENSG00000278966 AL031602.1 185546 eQTL 3.17e-04 -0.158 0.0438 0.0 0.0 0.184
ENSG00000278997 AL662907.1 15869 eQTL 5.65e-26 0.415 0.0383 0.00167 0.00234 0.184
ENSG00000279179 AL662907.2 -3752 eQTL 4.59e-10 -0.143 0.0227 0.0 0.0 0.184


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116497 S100PBP 342332 1.29e-06 9.19e-07 1.07e-07 1.02e-06 1.07e-07 3.2e-07 7.32e-07 1.37e-07 8.39e-07 2.72e-07 1.09e-06 3.68e-07 2.43e-06 2.67e-07 4.26e-07 2.89e-07 5.63e-07 4.11e-07 2.88e-07 6.11e-07 1.92e-07 5.2e-07 4.77e-07 2.19e-07 1.97e-06 2.71e-07 4e-07 4.77e-07 6.47e-07 7.6e-07 5.2e-07 5.88e-08 4.35e-08 2.87e-07 4.22e-07 5.2e-08 3.81e-07 7.53e-08 4.67e-07 3.12e-07 1.2e-07 1.3e-06 5.38e-08 9.61e-08 1.25e-07 3.92e-08 9.46e-08 1.2e-08 4.66e-08
ENSG00000116514 RNF19B 194414 1.87e-06 2.61e-06 3.21e-07 1.91e-06 3.51e-07 7.77e-07 1.31e-06 3.81e-07 1.75e-06 6.07e-07 1.76e-06 8.77e-07 6.49e-06 1.37e-06 3.4e-07 9.97e-07 1.14e-06 9.53e-07 5.81e-07 1.15e-06 7.16e-07 1.96e-06 1.59e-06 6.27e-07 3.8e-06 6.17e-07 1e-06 1.05e-06 1.66e-06 1.39e-06 1.81e-06 2.7e-07 1.88e-07 9.6e-07 1.27e-06 4.41e-07 7.24e-07 2.42e-07 1.26e-06 3.82e-07 2.56e-07 3.16e-06 3.77e-07 2.07e-07 1.75e-07 2.13e-07 2.08e-07 3.66e-08 8.28e-08
ENSG00000134686 PHC2 -271953 1.27e-06 1.22e-06 1.76e-07 1.3e-06 9.93e-08 5.92e-07 1.38e-06 2.74e-07 1.38e-06 3.13e-07 1.52e-06 5.55e-07 3.04e-06 3.1e-07 5.72e-07 5.69e-07 7.88e-07 5.27e-07 5.26e-07 5.75e-07 2.38e-07 9.92e-07 8.6e-07 4.66e-07 2.41e-06 2.44e-07 6.21e-07 7.59e-07 1.19e-06 1.11e-06 8.17e-07 4.91e-08 1.05e-07 6.95e-07 5.31e-07 1.46e-07 6.37e-07 1.18e-07 5.47e-07 2.28e-07 2.76e-07 1.63e-06 5.49e-08 1.32e-07 1.91e-07 8.76e-08 1.13e-07 5.93e-08 5.93e-08
ENSG00000142920 AZIN2 77995 5.87e-06 9.39e-06 7.43e-07 5.5e-06 1.06e-06 1.95e-06 7.52e-06 9.79e-07 4.72e-06 2.44e-06 7.02e-06 3.36e-06 1.79e-05 4e-06 1.41e-06 3.69e-06 2.92e-06 3.53e-06 1.5e-06 1.6e-06 2.55e-06 4.79e-06 4.77e-06 1.34e-06 1.15e-05 1.36e-06 2.55e-06 1.62e-06 4.46e-06 5.83e-06 4.12e-06 5.42e-07 7.75e-07 2.61e-06 3.09e-06 9.54e-07 1.31e-06 4.08e-07 1.63e-06 9.98e-07 6.17e-07 8.54e-06 6.59e-07 1.77e-07 2.88e-07 3.93e-07 8.03e-07 2.62e-07 2.31e-07
ENSG00000160094 ZNF362 -97393 5.08e-06 7.41e-06 5.33e-07 4.32e-06 7.24e-07 1.5e-06 4.62e-06 9.12e-07 4.91e-06 1.66e-06 5.34e-06 3.39e-06 1.34e-05 2.82e-06 1.18e-06 2.49e-06 1.92e-06 2.68e-06 1.36e-06 1.18e-06 1.57e-06 4.07e-06 4.04e-06 1.81e-06 9.17e-06 1.28e-06 2.2e-06 1.82e-06 4.23e-06 4.36e-06 3.25e-06 5.08e-07 6.01e-07 1.87e-06 2.14e-06 9.92e-07 1.06e-06 4.37e-07 1.27e-06 1e-06 4.03e-07 7.91e-06 4.01e-07 1.95e-07 3.5e-07 3.33e-07 4.97e-07 2.18e-07 2.8e-07
ENSG00000184389 A3GALT2 -161999 3.04e-06 4.1e-06 2.9e-07 2.6e-06 3.68e-07 7.88e-07 1.9e-06 4.05e-07 1.93e-06 7.31e-07 2.43e-06 1.32e-06 7.69e-06 1.34e-06 5.48e-07 1.05e-06 1.19e-06 1.35e-06 6.25e-07 1.39e-06 7.54e-07 2.02e-06 2.12e-06 9.49e-07 4.66e-06 8.03e-07 1.1e-06 1.45e-06 1.91e-06 1.9e-06 2.01e-06 2.84e-07 2.98e-07 1.28e-06 1.76e-06 4.42e-07 9.23e-07 3.66e-07 1.04e-06 4.23e-07 3.16e-07 3.84e-06 5.37e-07 1.99e-07 2.98e-07 3.29e-07 2.23e-07 1.27e-07 1.13e-07
ENSG00000278966 AL031602.1 185546 2.13e-06 3.13e-06 2.65e-07 2.02e-06 3.5e-07 8.24e-07 1.31e-06 4.04e-07 1.61e-06 6.44e-07 1.97e-06 9.29e-07 7.22e-06 1.41e-06 3.66e-07 1e-06 1.04e-06 1.12e-06 5.38e-07 1.14e-06 7.95e-07 1.92e-06 1.65e-06 5.76e-07 4.08e-06 6.9e-07 9.78e-07 1.05e-06 1.62e-06 1.63e-06 2e-06 2.78e-07 2.5e-07 1.14e-06 1.43e-06 4.66e-07 8.33e-07 2.88e-07 1.34e-06 3.99e-07 3.03e-07 3.36e-06 4.23e-07 1.99e-07 1.65e-07 2.46e-07 2.45e-07 3.77e-08 9.5e-08
ENSG00000278997 AL662907.1 15869 1.25e-05 1.84e-05 2.47e-06 1.45e-05 2.32e-06 6.2e-06 1.95e-05 2.2e-06 1.67e-05 5.5e-06 1.59e-05 7.15e-06 5.31e-05 9.38e-06 3.5e-06 6.97e-06 8.68e-06 1e-05 3.6e-06 5.19e-06 6.05e-06 1.07e-05 1.37e-05 5.03e-06 2.73e-05 4.32e-06 5.21e-06 5.64e-06 1.47e-05 1.52e-05 1.28e-05 1.23e-06 1.22e-06 5.41e-06 9.01e-06 2.82e-06 3.17e-06 2.26e-06 5.45e-06 3.85e-06 1.72e-06 2.05e-05 2.24e-06 1.62e-07 8.09e-07 1.82e-06 1.21e-06 7.51e-07 6.17e-07
ENSG00000279179 AL662907.2 -3752 2.93e-05 3.04e-05 4.29e-06 1.51e-05 4.75e-06 1.24e-05 4.15e-05 3.8e-06 2.82e-05 1.11e-05 3.08e-05 1.44e-05 5.08e-05 1.26e-05 5.71e-06 1.26e-05 1.56e-05 2.06e-05 6.95e-06 6.5e-06 1.09e-05 2.52e-05 2.78e-05 8.47e-06 3.87e-05 6.43e-06 8.52e-06 1.05e-05 2.78e-05 2.41e-05 1.78e-05 1.64e-06 2.38e-06 6.16e-06 1.04e-05 4.54e-06 3.16e-06 2.88e-06 4.75e-06 3.3e-06 1.7e-06 3.42e-05 2.99e-06 3.18e-07 2.04e-06 2.69e-06 3e-06 1.32e-06 1.02e-06