Genes within 1Mb (chr1:32873090:T:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116497 S100PBP 56323 eQTL 1.20e-23 0.158 0.0154 0.0 0.0 0.202
ENSG00000121900 TMEM54 -28348 eQTL 1.17e-03 -0.112 0.0343 0.00119 0.0 0.202
ENSG00000134684 YARS 54937 eQTL 5.25e-05 0.0765 0.0188 0.00464 0.00429 0.202
ENSG00000160097 FNDC5 608 eQTL 1.02e-03 0.159 0.0483 0.00651 0.00598 0.202
ENSG00000162520 SYNC 169494 eQTL 3.15e-06 0.178 0.0381 0.0 0.0 0.202
ENSG00000162522 KIAA1522 131260 eQTL 1.85e-38 0.453 0.0334 0.0 0.0 0.202
ENSG00000176261 ZBTB8OS 222187 eQTL 1.93e-03 0.0485 0.0156 0.0 0.0 0.202
ENSG00000182866 LCK 621851 eQTL 4.65e-02 -0.0186 0.00933 0.00123 0.0 0.202
ENSG00000183615 FAM167B 625868 eQTL 1.75e-02 -0.104 0.0438 0.0 0.0 0.202
ENSG00000220785 MTMR9LP 631470 eQTL 1.20e-04 -0.188 0.0487 0.0 0.0 0.202
ENSG00000225313 AL513327.1 -434258 eQTL 1.59e-02 -0.044 0.0182 0.0 0.0 0.202
ENSG00000278966 AL031602.1 -100463 eQTL 1.85e-04 0.161 0.043 0.0 0.0 0.202
ENSG00000278997 AL662907.1 -270140 eQTL 3.35e-02 -0.0845 0.0397 0.0 0.0 0.202
ENSG00000279179 AL662907.2 -289761 eQTL 1.05e-02 0.058 0.0226 0.0 0.0 0.202


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116497 S100PBP 56323 9.84e-06 1.18e-05 2.25e-06 7.03e-06 2.38e-06 5.16e-06 1.17e-05 2.08e-06 1.06e-05 5.73e-06 1.4e-05 6.49e-06 1.76e-05 3.99e-06 3.17e-06 7.21e-06 5.73e-06 9.58e-06 2.93e-06 3.09e-06 6.35e-06 1.04e-05 9.7e-06 3.73e-06 1.81e-05 4.43e-06 6.28e-06 5.04e-06 1.14e-05 1.02e-05 6.68e-06 9.92e-07 1.22e-06 3.5e-06 4.96e-06 2.82e-06 1.82e-06 1.93e-06 2.06e-06 1.11e-06 1.04e-06 1.45e-05 1.59e-06 2.07e-07 8.46e-07 1.76e-06 1.87e-06 6.45e-07 5.93e-07
ENSG00000116514 \N -91595 5.77e-06 8.94e-06 1.22e-06 4.2e-06 1.89e-06 3.28e-06 8.96e-06 1.5e-06 6.09e-06 4.43e-06 9.08e-06 4.98e-06 1.11e-05 3.89e-06 1.47e-06 5.73e-06 3.69e-06 4.46e-06 2.15e-06 2.66e-06 4.18e-06 7.65e-06 5.59e-06 2.87e-06 1.1e-05 2.38e-06 4.22e-06 3.1e-06 6.77e-06 7.57e-06 4.1e-06 8.14e-07 8.75e-07 2.73e-06 2.69e-06 2.07e-06 1.41e-06 1.35e-06 1.41e-06 8.66e-07 7.41e-07 9.16e-06 1.26e-06 1.79e-07 6.81e-07 1.28e-06 1.16e-06 7.28e-07 4.32e-07
ENSG00000142920 \N -208014 1.87e-06 2.52e-06 4.51e-07 1.71e-06 5.29e-07 7.7e-07 1.55e-06 6.96e-07 1.96e-06 1.01e-06 2.48e-06 1.68e-06 3.58e-06 1.35e-06 7.39e-07 1.66e-06 1.46e-06 2.26e-06 9.43e-07 1.44e-06 1.32e-06 2.87e-06 2.15e-06 1.21e-06 3.36e-06 1.26e-06 1.38e-06 1.81e-06 1.81e-06 2.2e-06 1.67e-06 4.51e-07 5.76e-07 1.23e-06 9.89e-07 9.75e-07 9.23e-07 4.2e-07 1.17e-06 3.66e-07 3.31e-07 3.32e-06 5.89e-07 1.89e-07 2.97e-07 2.94e-07 8.12e-07 2.32e-07 1.77e-07
ENSG00000162520 SYNC 169494 3.55e-06 4.12e-06 7.66e-07 1.82e-06 8.73e-07 1.03e-06 2.51e-06 8.89e-07 3.07e-06 1.81e-06 3.74e-06 3.37e-06 5.46e-06 1.66e-06 9.86e-07 2.49e-06 1.92e-06 2.38e-06 1.47e-06 1.01e-06 2.12e-06 3.65e-06 3.44e-06 1.71e-06 4.69e-06 1.23e-06 2e-06 1.48e-06 3.2e-06 3.53e-06 2e-06 5.26e-07 7.93e-07 1.49e-06 1.91e-06 9.43e-07 9.27e-07 4.75e-07 1.3e-06 3.46e-07 1.96e-07 4.49e-06 4.18e-07 1.62e-07 4.13e-07 3.05e-07 7.75e-07 4.1e-07 3.58e-07
ENSG00000162522 KIAA1522 131260 4.65e-06 5.05e-06 6.63e-07 3.08e-06 1.59e-06 1.56e-06 4.29e-06 1.14e-06 4.91e-06 2.88e-06 5.78e-06 3.12e-06 7.44e-06 1.92e-06 1.33e-06 3.84e-06 1.87e-06 3.83e-06 1.47e-06 1.41e-06 2.77e-06 4.9e-06 4.62e-06 1.81e-06 7.25e-06 1.87e-06 2.32e-06 1.65e-06 4.48e-06 4.67e-06 2.85e-06 4.31e-07 7.03e-07 1.52e-06 2.09e-06 1.09e-06 9.95e-07 4.72e-07 8.54e-07 4.57e-07 4.72e-07 6.04e-06 6.31e-07 1.55e-07 6.09e-07 1.28e-06 1.15e-06 6.9e-07 5.83e-07
ENSG00000182866 LCK 621851 2.95e-07 1.67e-07 6.99e-08 2.27e-07 1.06e-07 1.03e-07 2.4e-07 6.72e-08 1.89e-07 1.05e-07 1.86e-07 1.91e-07 2.24e-07 8.54e-08 6.6e-08 9.35e-08 6.17e-08 2.04e-07 7.76e-08 8.52e-08 1.39e-07 1.89e-07 1.75e-07 3.67e-08 2.37e-07 1.51e-07 1.31e-07 1.47e-07 1.32e-07 1.85e-07 1.26e-07 5.54e-08 5.09e-08 9.5e-08 3.97e-08 5.14e-08 7.52e-08 5.8e-08 4.9e-08 6.31e-08 5.81e-08 1.55e-07 2.62e-08 1.53e-08 4e-08 6.83e-09 7.8e-08 2.8e-09 4.66e-08
ENSG00000183615 FAM167B 625868 2.95e-07 1.7e-07 6.99e-08 2.31e-07 1.07e-07 9.31e-08 2.24e-07 6.75e-08 1.86e-07 1.05e-07 1.86e-07 1.86e-07 2.24e-07 8.54e-08 6.6e-08 9.35e-08 6.17e-08 1.91e-07 7.53e-08 8.52e-08 1.33e-07 1.89e-07 1.69e-07 3.27e-08 2.28e-07 1.43e-07 1.33e-07 1.42e-07 1.32e-07 1.85e-07 1.26e-07 5.46e-08 5.09e-08 9.52e-08 3.97e-08 5.14e-08 6.95e-08 5.8e-08 4.83e-08 6.19e-08 5.77e-08 1.55e-07 2.94e-08 1.14e-08 3.71e-08 6.68e-09 7.66e-08 2.75e-09 4.59e-08
ENSG00000220785 MTMR9LP 631470 2.95e-07 1.7e-07 7.16e-08 2.24e-07 1.07e-07 9.31e-08 2.24e-07 6.75e-08 1.86e-07 1.05e-07 1.83e-07 1.82e-07 2.13e-07 8.54e-08 6.2e-08 9.48e-08 5.73e-08 1.91e-07 7.53e-08 8e-08 1.33e-07 1.81e-07 1.69e-07 3.27e-08 2.28e-07 1.43e-07 1.33e-07 1.42e-07 1.32e-07 1.81e-07 1.22e-07 5.38e-08 4.98e-08 9.3e-08 3.36e-08 5.04e-08 6.87e-08 5.36e-08 4.75e-08 6.07e-08 5.65e-08 1.6e-07 2.89e-08 1.13e-08 3.66e-08 6.68e-09 7.52e-08 2.71e-09 4.52e-08
ENSG00000278966 AL031602.1 -100463 5.68e-06 7.69e-06 1.04e-06 3.98e-06 1.74e-06 2.55e-06 8.23e-06 1.34e-06 5.24e-06 4.01e-06 8.87e-06 4.5e-06 1.01e-05 3.14e-06 1.03e-06 5.24e-06 3.66e-06 3.77e-06 1.65e-06 2.44e-06 3.42e-06 7.2e-06 5.05e-06 2.42e-06 9.75e-06 2.29e-06 3.6e-06 2.51e-06 6.07e-06 7.59e-06 3.5e-06 6.32e-07 7.03e-07 2.53e-06 2.4e-06 2.09e-06 1.35e-06 9.08e-07 1.36e-06 7.37e-07 7.14e-07 8.32e-06 9.1e-07 1.61e-07 7.73e-07 9.83e-07 8.96e-07 6.58e-07 4.89e-07