Genes within 1Mb (chr1:32224256:A:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000084652 TXLNA 44581 eQTL 2.51e-02 0.0424 0.0189 0.0 0.0 0.338
ENSG00000121775 TMEM39B 152225 eQTL 2.33e-03 -0.0645 0.0211 0.0 0.0 0.338
ENSG00000160050 CCDC28B 23870 eQTL 1.62e-04 0.0842 0.0222 0.00523 0.00579 0.338
ENSG00000160097 FNDC5 -648226 eQTL 1.90e-02 0.0967 0.0412 0.00234 0.0 0.338
ENSG00000162520 SYNC -479340 eQTL 2.50e-04 -0.119 0.0325 0.0 0.0 0.338
ENSG00000162522 KIAA1522 -517574 eQTL 1.09e-05 -0.136 0.0307 0.0 0.0 0.338
ENSG00000183615 FAM167B -22966 eQTL 1.47e-08 0.21 0.0367 0.0 0.0 0.338
ENSG00000220785 MTMR9LP -17364 eQTL 4.20e-17 0.344 0.0402 0.0 0.0 0.338
ENSG00000228634 AL136115.1 291236 eQTL 4.92e-02 -0.0715 0.0363 0.00131 0.0 0.338


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000084652 TXLNA 44581 1.3e-05 1.87e-05 2.53e-06 9.64e-06 2.57e-06 6.2e-06 1.88e-05 2.58e-06 1.62e-05 7.19e-06 2e-05 7.45e-06 2.66e-05 6.73e-06 4.38e-06 9.02e-06 7.74e-06 1.2e-05 4.31e-06 3.57e-06 7e-06 1.36e-05 1.39e-05 3.78e-06 2.66e-05 4.47e-06 7.62e-06 6.3e-06 1.57e-05 1.3e-05 1.15e-05 1.08e-06 1.29e-06 3.78e-06 6.76e-06 2.87e-06 1.75e-06 2.43e-06 2.08e-06 2.11e-06 9.49e-07 2.15e-05 2.34e-06 2.62e-07 9.99e-07 2.34e-06 2.15e-06 6.17e-07 5.7e-07
ENSG00000121774 \N 210388 1.99e-06 2.57e-06 3.31e-07 1.76e-06 4.58e-07 8.1e-07 1.31e-06 3.99e-07 1.74e-06 8.08e-07 2.11e-06 1.44e-06 3.58e-06 1.44e-06 5.46e-07 1.18e-06 1.01e-06 1.46e-06 1.45e-06 7.99e-07 9.48e-07 2.24e-06 1.86e-06 8.39e-07 3.36e-06 1.12e-06 1.15e-06 1.54e-06 1.81e-06 1.64e-06 1.72e-06 3.03e-07 4.45e-07 8.91e-07 9.21e-07 8.6e-07 7.68e-07 4.29e-07 6.01e-07 3.79e-07 3.68e-07 3.41e-06 6.16e-07 1.75e-07 3.55e-07 2.95e-07 4.22e-07 2.64e-07 2.46e-07
ENSG00000121775 TMEM39B 152225 4.16e-06 4.88e-06 8.52e-07 2.65e-06 1.12e-06 1.35e-06 3.15e-06 9.76e-07 4.57e-06 2.01e-06 4.86e-06 3.21e-06 7.71e-06 2.4e-06 1.42e-06 2.66e-06 1.99e-06 2.87e-06 1.55e-06 8.96e-07 2.67e-06 4.14e-06 3.42e-06 1.82e-06 5.89e-06 1.29e-06 2.21e-06 1.65e-06 4.38e-06 3.61e-06 2.81e-06 4.73e-07 7.75e-07 1.78e-06 2.04e-06 9.97e-07 9.66e-07 4.24e-07 1.3e-06 4.23e-07 2.25e-07 5.66e-06 4.01e-07 1.78e-07 3.35e-07 5.17e-07 6.64e-07 2.4e-07 3.53e-07
ENSG00000160050 CCDC28B 23870 2.06e-05 2.76e-05 3.99e-06 1.31e-05 4.08e-06 9.8e-06 2.95e-05 3.72e-06 2.27e-05 1.07e-05 2.96e-05 1.16e-05 3.74e-05 1.07e-05 5.5e-06 1.22e-05 1.11e-05 1.88e-05 6.52e-06 5.18e-06 9.67e-06 2.28e-05 2.24e-05 5.74e-06 3.56e-05 5.73e-06 9.71e-06 9.09e-06 2.34e-05 1.91e-05 1.54e-05 1.56e-06 1.74e-06 5.34e-06 9.27e-06 4.37e-06 2.18e-06 2.97e-06 3.22e-06 3.01e-06 1.58e-06 3.1e-05 2.65e-06 3.6e-07 1.92e-06 2.96e-06 3.33e-06 1.31e-06 1.24e-06
ENSG00000162520 SYNC -479340 5.85e-07 3.77e-07 8.9e-08 3.58e-07 1.1e-07 1.57e-07 3.94e-07 6.75e-08 2.56e-07 1.65e-07 3.92e-07 2.11e-07 5.39e-07 1.1e-07 1.27e-07 1.46e-07 1.17e-07 2.96e-07 2.17e-07 8.1e-08 1.89e-07 2.48e-07 2.56e-07 7.22e-08 5.15e-07 2.07e-07 1.57e-07 2.24e-07 2.19e-07 2.52e-07 2.11e-07 7.59e-08 5.51e-08 1.21e-07 1.83e-07 9.51e-08 1.14e-07 6.97e-08 5.89e-08 2.56e-08 3.31e-08 4.42e-07 4.18e-08 1.73e-08 8.24e-08 1.84e-08 9.38e-08 7.25e-09 5.43e-08
ENSG00000162522 KIAA1522 -517574 4.68e-07 2.89e-07 7.87e-08 2.66e-07 1.09e-07 1.25e-07 3.25e-07 6.12e-08 2.01e-07 1.37e-07 2.68e-07 1.72e-07 4.11e-07 9.48e-08 9.12e-08 1.14e-07 8.64e-08 2.66e-07 1.69e-07 8.31e-08 1.65e-07 2.15e-07 2.11e-07 4.34e-08 3.7e-07 1.86e-07 1.29e-07 1.88e-07 1.6e-07 1.85e-07 1.78e-07 8.02e-08 5.86e-08 1.02e-07 1.16e-07 6.83e-08 8.87e-08 5.53e-08 4.99e-08 6.05e-08 4.73e-08 3.27e-07 2.67e-08 1.58e-08 6.59e-08 9.31e-09 8.93e-08 2.99e-09 5.71e-08
ENSG00000183615 FAM167B -22966 2.13e-05 2.79e-05 4.15e-06 1.32e-05 4.22e-06 1e-05 3.06e-05 3.67e-06 2.31e-05 1.1e-05 3.02e-05 1.2e-05 3.8e-05 1.08e-05 5.6e-06 1.25e-05 1.13e-05 1.92e-05 6.61e-06 5.19e-06 9.78e-06 2.36e-05 2.31e-05 5.93e-06 3.59e-05 5.78e-06 9.99e-06 9.19e-06 2.39e-05 1.95e-05 1.57e-05 1.58e-06 1.88e-06 5.42e-06 9.4e-06 4.4e-06 2.31e-06 2.96e-06 3.24e-06 3.04e-06 1.63e-06 3.12e-05 2.72e-06 3.59e-07 2e-06 2.97e-06 3.3e-06 1.35e-06 1.3e-06
ENSG00000220785 MTMR9LP -17364 2.62e-05 3.01e-05 4.87e-06 1.42e-05 5.25e-06 1.2e-05 3.58e-05 3.95e-06 2.64e-05 1.25e-05 3.34e-05 1.46e-05 4.19e-05 1.23e-05 6.11e-06 1.49e-05 1.36e-05 2.17e-05 7.21e-06 5.62e-06 1.19e-05 2.7e-05 2.61e-05 7.18e-06 3.91e-05 6.43e-06 1.17e-05 1.09e-05 2.76e-05 2.15e-05 1.74e-05 1.6e-06 2.23e-06 6.16e-06 1.04e-05 4.54e-06 2.68e-06 3.18e-06 3.62e-06 3.24e-06 1.66e-06 3.42e-05 2.93e-06 3.62e-07 2.07e-06 3.29e-06 3.8e-06 1.49e-06 1.41e-06
ENSG00000224066 \N 17442 2.62e-05 3.01e-05 4.87e-06 1.41e-05 5.16e-06 1.19e-05 3.55e-05 3.95e-06 2.64e-05 1.25e-05 3.34e-05 1.46e-05 4.19e-05 1.23e-05 6.11e-06 1.48e-05 1.35e-05 2.16e-05 7.21e-06 5.62e-06 1.19e-05 2.66e-05 2.61e-05 7.18e-06 3.91e-05 6.4e-06 1.17e-05 1.09e-05 2.73e-05 2.15e-05 1.74e-05 1.6e-06 2.22e-06 6.16e-06 1.04e-05 4.53e-06 2.72e-06 3.18e-06 3.62e-06 3.24e-06 1.66e-06 3.42e-05 2.93e-06 3.62e-07 2.07e-06 3.29e-06 3.77e-06 1.5e-06 1.41e-06
ENSG00000279179 \N -938595 2.67e-07 1.19e-07 3.88e-08 1.84e-07 9.16e-08 9.61e-08 1.42e-07 5.33e-08 1.4e-07 4.57e-08 1.62e-07 8.14e-08 1.41e-07 6.56e-08 5.99e-08 7.17e-08 3.94e-08 1.18e-07 5.75e-08 4.42e-08 1.13e-07 1.26e-07 1.32e-07 3.79e-08 1.37e-07 1.16e-07 1.11e-07 9.65e-08 1.05e-07 1.12e-07 9.64e-08 3.26e-08 3.66e-08 8.55e-08 8.94e-08 3.2e-08 5.31e-08 9.22e-08 6.78e-08 3.86e-08 3.89e-08 1.35e-07 5.21e-08 1.42e-08 5.15e-08 1.83e-08 1.24e-07 3.78e-09 5.04e-08