Genes within 1Mb (chr1:32072267:GCTT:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000025800 KPNA6 -35789 eQTL 7.30e-05 0.0524 0.0131 0.00283 0.00292 0.194
ENSG00000060688 SNRNP40 775479 eQTL 1.25e-02 0.0517 0.0207 0.00156 0.0 0.194
ENSG00000084623 EIF3I -149661 eQTL 5.48e-04 -0.0623 0.018 0.0 0.0 0.194
ENSG00000116478 HDAC1 -219816 eQTL 4.54e-02 0.0344 0.0172 0.0 0.0 0.194
ENSG00000116497 S100PBP -744500 eQTL 1.94e-02 -0.0377 0.0161 0.0 0.0 0.194
ENSG00000116514 RNF19B -892418 eQTL 9.56e-03 0.0536 0.0206 0.0 0.0 0.194
ENSG00000121775 TMEM39B 236 eQTL 6.63e-16 -0.198 0.024 0.015 0.0139 0.194
ENSG00000134668 SPOCD1 256216 eQTL 1.21e-02 -0.0763 0.0304 0.0 0.0 0.194
ENSG00000134684 YARS -745886 eQTL 4.02e-02 -0.0388 0.0189 0.0 0.0 0.194
ENSG00000160050 CCDC28B -128119 eQTL 4.47e-05 0.107 0.026 0.0175 0.0162 0.194
ENSG00000160055 TMEM234 -150092 eQTL 1.71e-01 0.0196 0.0143 0.00195 0.0 0.194
ENSG00000162520 SYNC -631329 eQTL 1.45e-08 -0.215 0.0377 0.00274 0.00138 0.194
ENSG00000162522 KIAA1522 -669563 eQTL 3.54e-16 -0.291 0.0351 0.0 0.0 0.194
ENSG00000162526 TSSK3 -279254 eQTL 4.00e-02 0.085 0.0413 0.0 0.0 0.194
ENSG00000176261 ZBTB8OS -578636 eQTL 8.13e-05 -0.0612 0.0155 0.0 0.0 0.194
ENSG00000183615 FAM167B -174955 eQTL 3.21e-48 0.604 0.0391 0.0 0.0 0.194
ENSG00000220785 MTMR9LP -169353 eQTL 1.82e-175 1.13 0.0321 0.0 0.0 0.194
ENSG00000222046 DCDC2B -136827 eQTL 7.12e-05 0.125 0.0313 0.00457 0.00402 0.194
ENSG00000224066 AL049795.1 -134547 eQTL 1.11e-02 0.112 0.0439 0.00178 0.0 0.194
ENSG00000278966 AL031602.1 -901286 eQTL 6.74e-03 -0.117 0.0429 0.0 0.0 0.194


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000025800 KPNA6 -35789 1.56e-05 1.71e-05 2.57e-06 1.34e-05 2.34e-06 5.29e-06 1.48e-05 2.18e-06 1.06e-05 4.26e-06 1.43e-05 6.8e-06 3.03e-05 5.17e-06 3.4e-06 6.7e-06 4.74e-06 9.69e-06 3.42e-06 4.17e-06 6.18e-06 1.1e-05 1.48e-05 4.02e-06 2.14e-05 3.77e-06 4.83e-06 5.26e-06 1.27e-05 1.12e-05 9.55e-06 9.49e-07 1.25e-06 4.69e-06 8.46e-06 2.85e-06 2.04e-06 2.7e-06 2.19e-06 3.11e-06 1.14e-06 1.51e-05 2.79e-06 2.09e-07 7.93e-07 2.75e-06 9.2e-07 7.51e-07 4.57e-07
ENSG00000084623 EIF3I -149661 5.61e-06 3.99e-06 1.04e-06 1.77e-06 4.18e-07 9.68e-07 2.26e-06 3.71e-07 1.92e-06 7.34e-07 1.91e-06 1.74e-06 7.67e-06 1.42e-06 1.35e-06 2.63e-06 1.28e-06 2.77e-06 1.45e-06 1.36e-06 1.8e-06 4.47e-06 3.51e-06 1.01e-06 4.68e-06 1.05e-06 1.1e-06 1.4e-06 2.57e-06 2.37e-06 2.08e-06 1.57e-07 5.43e-07 2.7e-06 1.79e-06 6.07e-07 9.83e-07 4.6e-07 1.32e-06 6.18e-07 1.51e-07 3.4e-06 1.45e-06 1.63e-07 3.14e-07 1.16e-06 4.15e-07 1.45e-07 2.02e-07
ENSG00000084652 \N -107408 5.87e-06 4.75e-06 1.23e-06 3.17e-06 4.78e-07 1.35e-06 2.42e-06 5.61e-07 2.69e-06 1.15e-06 2.48e-06 3.36e-06 7.82e-06 2.04e-06 1.23e-06 3.87e-06 1.57e-06 3.39e-06 1.63e-06 9.87e-07 2.93e-06 4.88e-06 4.37e-06 1.8e-06 5.24e-06 1.27e-06 1.31e-06 1.73e-06 3.78e-06 3.32e-06 2.13e-06 2.46e-07 8.12e-07 3.37e-06 2.24e-06 1.01e-06 1.36e-06 5.44e-07 8.1e-07 8.89e-07 4.59e-07 3.84e-06 1.98e-06 1.63e-07 3.82e-07 1.01e-06 8.27e-07 2.28e-07 3.41e-07
ENSG00000121775 TMEM39B 236 0.00034 0.000374 4.38e-05 9.99e-05 4.45e-05 0.000116 0.000306 4.3e-05 0.000267 0.000124 0.000327 0.000151 0.000411 0.000124 4.99e-05 0.000201 0.000119 0.000187 6.62e-05 5.02e-05 0.000141 0.000315 0.000263 7.34e-05 0.000347 8.97e-05 0.000147 9.76e-05 0.000256 9.99e-05 0.000175 9.15e-06 1.46e-05 4.77e-05 5.73e-05 3.34e-05 1.44e-05 1.44e-05 2.93e-05 1.2e-05 8.13e-06 0.000391 3.7e-05 1.02e-06 2.58e-05 3.56e-05 3.43e-05 1.3e-05 1.13e-05
ENSG00000134684 YARS -745886 3.27e-07 1.59e-07 5.64e-08 2.05e-07 8.92e-08 9.31e-08 1.9e-07 5.29e-08 1.45e-07 4.57e-08 1.54e-07 1.01e-07 2.29e-07 8.55e-08 5.55e-08 7.74e-08 3.88e-08 1.56e-07 5.75e-08 3.74e-08 1.04e-07 1.39e-07 1.44e-07 3.68e-08 2.02e-07 1.16e-07 1.11e-07 9.57e-08 1.24e-07 9.49e-08 9.64e-08 3.29e-08 2.74e-08 9.81e-08 4.41e-08 4.12e-08 4.63e-08 9.13e-08 8.42e-08 3.12e-08 3.77e-08 1.4e-07 4.83e-08 1.08e-08 1.12e-07 9.86e-09 1.27e-07 4.7e-09 4.72e-08
ENSG00000160050 CCDC28B -128119 5.72e-06 4.09e-06 1.37e-06 2.41e-06 5.07e-07 1.15e-06 2.55e-06 4.32e-07 2.27e-06 9.02e-07 1.92e-06 2.52e-06 7.37e-06 1.36e-06 1.33e-06 3.34e-06 1.59e-06 3.05e-06 1.45e-06 1.2e-06 2.29e-06 4.93e-06 3.54e-06 1.46e-06 4.89e-06 1.22e-06 1.17e-06 1.78e-06 3.12e-06 2.86e-06 1.98e-06 3.07e-07 6.26e-07 2.98e-06 2.1e-06 7.22e-07 1.05e-06 4.39e-07 9.68e-07 7.37e-07 2.79e-07 4.04e-06 1.61e-06 1.58e-07 3.97e-07 1.05e-06 5.64e-07 2.42e-07 1.63e-07
ENSG00000162520 SYNC -631329 6.8e-07 2.88e-07 6.72e-08 2.53e-07 9.16e-08 1.57e-07 2.95e-07 5.24e-08 1.54e-07 5.42e-08 1.62e-07 1.31e-07 4.34e-07 1.01e-07 6.02e-08 1.01e-07 4.09e-08 2.43e-07 7.16e-08 4.03e-08 1.21e-07 2.07e-07 1.69e-07 3.17e-08 3.55e-07 1.26e-07 1.07e-07 1.04e-07 1.36e-07 1.29e-07 1.07e-07 3.19e-08 3.09e-08 1.17e-07 1.83e-07 3.93e-08 5.05e-08 9.65e-08 7.92e-08 3e-08 3.07e-08 1.6e-07 2.89e-08 1.79e-08 1.01e-07 1.75e-08 1.22e-07 4.5e-09 4.72e-08
ENSG00000162522 KIAA1522 -669563 5.14e-07 2.4e-07 6.55e-08 2.28e-07 9.01e-08 1.32e-07 2.5e-07 5.24e-08 1.5e-07 4.94e-08 1.73e-07 1.2e-07 3.48e-07 8.85e-08 6e-08 9.01e-08 3.87e-08 2.04e-07 7.12e-08 3.88e-08 1.13e-07 1.89e-07 1.62e-07 2.64e-08 2.86e-07 1.21e-07 1.07e-07 9.74e-08 1.37e-07 1.06e-07 1.02e-07 3.19e-08 2.91e-08 9.9e-08 1.16e-07 4.02e-08 5.01e-08 9.6e-08 8.3e-08 3.05e-08 3.35e-08 1.5e-07 3.4e-08 2.03e-08 1.09e-07 9.31e-09 1.25e-07 4.6e-09 4.72e-08
ENSG00000168528 \N 662702 5.37e-07 2.5e-07 6.42e-08 2.35e-07 9.01e-08 1.44e-07 2.5e-07 5.24e-08 1.5e-07 4.94e-08 1.73e-07 1.22e-07 3.6e-07 9.15e-08 5.99e-08 9.11e-08 3.93e-08 2.04e-07 7.12e-08 4.03e-08 1.13e-07 1.9e-07 1.58e-07 2.64e-08 2.99e-07 1.21e-07 1.07e-07 9.92e-08 1.37e-07 1.05e-07 1.06e-07 3.19e-08 2.91e-08 9.81e-08 1.27e-07 4.02e-08 5.01e-08 9.6e-08 8.3e-08 3.03e-08 3.35e-08 1.52e-07 3.46e-08 2.06e-08 1.09e-07 9.49e-09 1.25e-07 4.6e-09 4.72e-08
ENSG00000183615 FAM167B -174955 5.14e-06 3.63e-06 7.72e-07 1.95e-06 3.82e-07 8.19e-07 2.03e-06 3.46e-07 1.7e-06 7.21e-07 2.09e-06 1.42e-06 6.51e-06 1.37e-06 1.42e-06 2.27e-06 1.12e-06 2.38e-06 1.27e-06 9.31e-07 1.4e-06 4.19e-06 3.25e-06 9.54e-07 4.29e-06 8.38e-07 1.01e-06 1.05e-06 1.94e-06 1.85e-06 1.64e-06 4.47e-08 4.76e-07 2.24e-06 1.65e-06 4.28e-07 9.14e-07 4.37e-07 1.28e-06 4.56e-07 2.88e-07 3.22e-06 1.39e-06 1.54e-07 3.17e-07 7.61e-07 3.69e-07 3.73e-08 2.87e-07
ENSG00000220785 MTMR9LP -169353 5.07e-06 3.67e-06 9.56e-07 1.96e-06 3.79e-07 8.22e-07 2.13e-06 3.49e-07 1.76e-06 7.41e-07 2.02e-06 1.46e-06 6.55e-06 1.33e-06 1.39e-06 2.37e-06 1.1e-06 2.37e-06 1.39e-06 1.09e-06 1.37e-06 4.14e-06 3.21e-06 9.81e-07 4.31e-06 8.82e-07 1.01e-06 1.11e-06 1.98e-06 1.99e-06 1.73e-06 3.77e-08 4.31e-07 2.39e-06 1.74e-06 4.8e-07 9.6e-07 4.72e-07 1.26e-06 5.04e-07 3.04e-07 3.26e-06 1.43e-06 1.54e-07 2.81e-07 9.32e-07 4.27e-07 4.88e-08 3.12e-07
ENSG00000222046 DCDC2B -136827 5.75e-06 4.13e-06 1.32e-06 2.32e-06 4.65e-07 1.05e-06 2.47e-06 4.01e-07 2.08e-06 8.25e-07 1.86e-06 2.13e-06 7.05e-06 1.22e-06 1.43e-06 3.03e-06 1.49e-06 2.87e-06 1.55e-06 1.28e-06 1.9e-06 4.79e-06 3.47e-06 1.2e-06 4.78e-06 1.2e-06 1.22e-06 1.6e-06 2.76e-06 2.55e-06 1.94e-06 2.38e-07 6e-07 2.88e-06 1.94e-06 6.32e-07 1.08e-06 4.58e-07 1.08e-06 7.4e-07 2.54e-07 3.42e-06 1.6e-06 1.57e-07 3.75e-07 1.06e-06 4.97e-07 2.53e-07 1.58e-07