Genes within 1Mb (chr1:31877767:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000025800 KPNA6 -230289 eQTL 2.46e-02 0.0316 0.014 0.0 0.0 0.161
ENSG00000084623 EIF3I -344161 eQTL 6.08e-05 -0.0766 0.019 0.00356 0.00292 0.161
ENSG00000116478 HDAC1 -414316 eQTL 1.36e-02 0.0451 0.0182 0.0 0.0 0.161
ENSG00000116497 S100PBP -939000 eQTL 2.92e-02 -0.0373 0.0171 0.0 0.0 0.161
ENSG00000121775 TMEM39B -194264 eQTL 1.11e-10 -0.169 0.0258 0.0 0.0 0.161
ENSG00000134668 SPOCD1 61716 eQTL 2.98e-03 -0.0958 0.0322 0.0 0.0 0.161
ENSG00000160050 CCDC28B -322619 eQTL 3.07e-03 0.0823 0.0277 0.0 0.0 0.161
ENSG00000162512 SDC3 969009 eQTL 6.91e-04 0.109 0.0319 0.00743 0.00211 0.161
ENSG00000162520 SYNC -825829 eQTL 6.94e-09 -0.234 0.04 0.00702 0.0054 0.161
ENSG00000162521 RBBP4 -773375 eQTL 4.20e-02 0.0357 0.0175 0.0 0.0 0.161
ENSG00000162522 KIAA1522 -864063 eQTL 1.08e-14 -0.294 0.0374 0.0 0.0 0.161
ENSG00000176261 ZBTB8OS -773136 eQTL 1.23e-02 -0.0414 0.0165 0.0 0.0 0.161
ENSG00000183615 FAM167B -369455 eQTL 4.70e-13 0.331 0.0451 0.0 0.0 0.161
ENSG00000220785 MTMR9LP -363853 eQTL 1.33e-53 0.752 0.0457 0.0 0.0 0.161
ENSG00000222046 DCDC2B -331327 eQTL 1.31e-03 0.107 0.0333 0.0 0.0 0.161
ENSG00000224066 AL049795.1 -329047 eQTL 2.68e-03 0.14 0.0466 0.00341 0.00239 0.161
ENSG00000269967 AL136115.2 -44074 eQTL 1.66e-02 -0.0822 0.0342 0.002 0.0 0.161


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000084623 EIF3I -344161 1.09e-06 6.07e-07 1.08e-07 4.29e-07 1.07e-07 2.01e-07 5.28e-07 1.03e-07 3.94e-07 2.16e-07 6.56e-07 3.61e-07 8.37e-07 1.34e-07 1.5e-07 2.23e-07 3.24e-07 3.73e-07 1.7e-07 1.32e-07 1.92e-07 3.76e-07 3.45e-07 1.27e-07 8.62e-07 2.4e-07 2.57e-07 2.24e-07 3.56e-07 4.9e-07 3.32e-07 7.41e-08 5.38e-08 1.57e-07 3.08e-07 8.32e-08 1.13e-07 6.97e-08 4.44e-08 3.12e-08 8.55e-08 6.19e-07 2.16e-08 1.74e-08 9.15e-08 1.32e-08 9.98e-08 2.99e-09 5.52e-08
ENSG00000116478 HDAC1 -414316 7.57e-07 3.11e-07 7.6e-08 3.19e-07 1.06e-07 1.26e-07 3.44e-07 7.52e-08 2.35e-07 1.37e-07 3.21e-07 2.04e-07 4.74e-07 8.85e-08 8.45e-08 1.39e-07 9.53e-08 2.87e-07 8.68e-08 8.1e-08 1.52e-07 2.3e-07 2.26e-07 4.91e-08 4.54e-07 2e-07 1.48e-07 1.61e-07 1.87e-07 2.01e-07 1.93e-07 5.22e-08 4.97e-08 1.21e-07 1.54e-07 5.14e-08 6.67e-08 7.1e-08 4.82e-08 7.77e-08 2.81e-08 3.26e-07 3.59e-08 7.26e-09 4.36e-08 9.65e-09 8.21e-08 0.0 4.55e-08
ENSG00000121775 TMEM39B -194264 1.65e-06 1.33e-06 2.54e-07 1.23e-06 3.48e-07 5.99e-07 1.46e-06 3.69e-07 1.43e-06 5.63e-07 1.99e-06 8.15e-07 2.54e-06 2.98e-07 5.22e-07 9.57e-07 9.36e-07 9.1e-07 8.35e-07 6.26e-07 7.59e-07 1.81e-06 1.05e-06 6.31e-07 2.41e-06 6.95e-07 9.55e-07 7.24e-07 1.5e-06 1.27e-06 8.22e-07 1.89e-07 2.08e-07 6e-07 5.64e-07 4.74e-07 6.66e-07 2.21e-07 4.12e-07 2.91e-07 2.88e-07 1.96e-06 1.38e-07 4.12e-08 1.52e-07 1.26e-07 2.41e-07 8.87e-08 8.37e-08
ENSG00000160055 \N -344592 1.09e-06 6.09e-07 1.08e-07 4.29e-07 1.07e-07 2.01e-07 5.28e-07 1.03e-07 3.94e-07 2.16e-07 6.56e-07 3.61e-07 8.37e-07 1.34e-07 1.5e-07 2.23e-07 3.24e-07 3.73e-07 1.7e-07 1.3e-07 1.92e-07 3.76e-07 3.45e-07 1.27e-07 8.62e-07 2.4e-07 2.57e-07 2.24e-07 3.56e-07 4.9e-07 3.32e-07 7.33e-08 5.38e-08 1.57e-07 3.08e-07 8.32e-08 1.13e-07 6.97e-08 4.44e-08 3.12e-08 8.55e-08 6.19e-07 2.16e-08 1.74e-08 9.15e-08 1.32e-08 9.98e-08 2.99e-09 5.52e-08
ENSG00000162512 SDC3 969009 2.64e-07 1.1e-07 3.62e-08 1.78e-07 9.02e-08 9.57e-08 1.41e-07 5.33e-08 1.41e-07 4.38e-08 1.6e-07 7.88e-08 1.3e-07 6.21e-08 5.4e-08 7.5e-08 4.48e-08 1.14e-07 5.19e-08 4.03e-08 1.04e-07 1.28e-07 1.26e-07 4.54e-08 1.33e-07 1.19e-07 1.12e-07 8.71e-08 1.02e-07 1.09e-07 9.73e-08 4.03e-08 2.91e-08 8.82e-08 8.99e-08 3.99e-08 4.72e-08 9.44e-08 7.63e-08 3.18e-08 4.57e-08 1.35e-07 3.93e-08 2.32e-08 7.79e-08 1.7e-08 1.26e-07 4.2e-09 4.79e-08
ENSG00000162520 SYNC -825829 2.74e-07 1.16e-07 3.72e-08 1.8e-07 8.83e-08 9.87e-08 1.42e-07 5.19e-08 1.41e-07 4.57e-08 1.62e-07 8.14e-08 1.41e-07 6.38e-08 5.84e-08 7.37e-08 3.9e-08 1.18e-07 5.21e-08 4.21e-08 1.04e-07 1.26e-07 1.32e-07 4.16e-08 1.37e-07 1.16e-07 1.11e-07 9.32e-08 1.05e-07 1.11e-07 9.64e-08 3.7e-08 3.26e-08 8.68e-08 8.96e-08 3.93e-08 5.01e-08 9.55e-08 7.23e-08 3.98e-08 3.57e-08 1.33e-07 4.1e-08 2.79e-08 6.38e-08 1.68e-08 1.23e-07 4.04e-09 5.09e-08
ENSG00000162521 RBBP4 -773375 2.74e-07 1.25e-07 3.71e-08 1.86e-07 8.83e-08 9.65e-08 1.44e-07 5.2e-08 1.44e-07 4.74e-08 1.6e-07 8.36e-08 1.41e-07 6.56e-08 6e-08 7.3e-08 3.94e-08 1.21e-07 5.36e-08 4.42e-08 1.08e-07 1.27e-07 1.34e-07 3.79e-08 1.4e-07 1.14e-07 1.08e-07 9.36e-08 1.05e-07 1.12e-07 9.7e-08 3.87e-08 3.28e-08 8.44e-08 8.76e-08 3.94e-08 5.03e-08 9.65e-08 6.78e-08 3.87e-08 4.88e-08 1.35e-07 3.99e-08 3.23e-08 5.59e-08 1.67e-08 1.23e-07 3.95e-09 4.81e-08
ENSG00000162522 KIAA1522 -864063 2.69e-07 1.16e-07 3.56e-08 1.82e-07 8.92e-08 9.71e-08 1.38e-07 5.33e-08 1.4e-07 4.4e-08 1.56e-07 7.78e-08 1.41e-07 6.38e-08 5.53e-08 7.17e-08 3.88e-08 1.14e-07 5.21e-08 4.2e-08 1.05e-07 1.26e-07 1.32e-07 4.13e-08 1.32e-07 1.14e-07 1.12e-07 9.15e-08 1.05e-07 1.12e-07 9.91e-08 3.94e-08 3.09e-08 8.49e-08 8.82e-08 3.77e-08 5.03e-08 9.49e-08 7.47e-08 3.37e-08 3.92e-08 1.35e-07 3.98e-08 3.25e-08 6.92e-08 1.69e-08 1.26e-07 4.09e-09 5.09e-08
ENSG00000168528 \N 468202 5.14e-07 2.17e-07 6.57e-08 2.44e-07 1.02e-07 8.85e-08 2.74e-07 5.89e-08 1.89e-07 1.05e-07 2.07e-07 1.52e-07 3.4e-07 8.55e-08 6.12e-08 1.06e-07 5.73e-08 2.21e-07 7.36e-08 6.02e-08 1.33e-07 1.9e-07 1.81e-07 4.17e-08 2.99e-07 1.65e-07 1.29e-07 1.36e-07 1.36e-07 1.38e-07 1.43e-07 4.93e-08 3.65e-08 9.98e-08 6.78e-08 3.57e-08 6.04e-08 8.25e-08 5.84e-08 7.78e-08 5.39e-08 2.5e-07 4.17e-08 1.43e-08 3.4e-08 1.01e-08 8.67e-08 2.02e-09 4.98e-08
ENSG00000183615 FAM167B -369455 9.14e-07 4.93e-07 8.99e-08 3.87e-07 1.07e-07 1.64e-07 4.53e-07 9.07e-08 3.03e-07 1.89e-07 4.88e-07 3.11e-07 6.98e-07 1.1e-07 1.27e-07 1.96e-07 2.11e-07 3.39e-07 1.5e-07 8.86e-08 1.91e-07 2.99e-07 3.03e-07 1.04e-07 6.87e-07 2.36e-07 1.97e-07 1.95e-07 2.78e-07 3.52e-07 2.54e-07 8.48e-08 5.41e-08 1.37e-07 2.84e-07 6.94e-08 9.9e-08 6e-08 5.62e-08 5.54e-08 4.82e-08 4.95e-07 2.62e-08 2e-08 8.06e-08 8.76e-09 9.34e-08 0.0 4.74e-08
ENSG00000220785 MTMR9LP -363853 9.39e-07 5.18e-07 8.9e-08 3.92e-07 1.05e-07 1.71e-07 4.93e-07 9.26e-08 3.32e-07 2.01e-07 4.97e-07 3.21e-07 7.02e-07 1.1e-07 1.32e-07 2.08e-07 2.25e-07 3.44e-07 1.51e-07 9.17e-08 1.89e-07 3.1e-07 3.07e-07 1.13e-07 7.42e-07 2.4e-07 2.08e-07 1.97e-07 2.84e-07 3.8e-07 2.73e-07 7.71e-08 5.64e-08 1.36e-07 2.85e-07 7.56e-08 1.03e-07 6.2e-08 4.9e-08 5.12e-08 6.39e-08 5.29e-07 2.32e-08 2.05e-08 8.01e-08 8.94e-09 1.04e-07 2.75e-09 4.82e-08
ENSG00000222046 DCDC2B -331327 1.26e-06 6.56e-07 1.07e-07 4.4e-07 9.82e-08 2.16e-07 5.76e-07 1.31e-07 4.43e-07 2.39e-07 7.67e-07 3.73e-07 9.44e-07 1.48e-07 1.78e-07 2.83e-07 3.75e-07 3.95e-07 1.93e-07 1.53e-07 2.01e-07 3.95e-07 3.81e-07 1.44e-07 9.82e-07 2.6e-07 2.62e-07 2.68e-07 3.99e-07 5.82e-07 3.56e-07 6.06e-08 5.42e-08 1.64e-07 3.38e-07 1.19e-07 1.06e-07 7.98e-08 6.38e-08 2.68e-08 9.91e-08 7.04e-07 2.8e-08 1.8e-08 1.1e-07 1.78e-08 7.25e-08 3.2e-09 5.54e-08