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Genes within 1Mb (chr1:30930864:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -365924 sc-eQTL 3.91e-01 -0.0932 0.108 0.863 B L1
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 6.22e-02 -0.162 0.0863 0.863 B L1
ENSG00000134644 PUM1 -135127 sc-eQTL 9.64e-01 -0.00333 0.073 0.863 B L1
ENSG00000162510 MATN1 207279 sc-eQTL 3.68e-01 0.0691 0.0766 0.863 B L1
ENSG00000162511 LAPTM5 173090 sc-eQTL 4.87e-01 0.0418 0.06 0.863 B L1
ENSG00000162517 PEF1 -714032 sc-eQTL 8.38e-01 -0.0186 0.0907 0.863 B L1
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 6.45e-01 0.0325 0.0704 0.863 B L1
ENSG00000287510 AL137857.1 199171 sc-eQTL 2.87e-01 -0.0888 0.0831 0.863 B L1
ENSG00000060688 SNRNP40 -365924 sc-eQTL 7.09e-01 -0.0345 0.0924 0.863 CD4T L1
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 6.90e-01 0.0289 0.0722 0.863 CD4T L1
ENSG00000134644 PUM1 -135127 sc-eQTL 2.62e-02 0.142 0.0636 0.863 CD4T L1
ENSG00000162511 LAPTM5 173090 sc-eQTL 5.21e-01 -0.0458 0.0712 0.863 CD4T L1
ENSG00000162517 PEF1 -714032 sc-eQTL 5.89e-01 -0.0403 0.0745 0.863 CD4T L1
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 7.64e-01 -0.0192 0.0637 0.863 CD4T L1
ENSG00000287510 AL137857.1 199171 sc-eQTL 2.46e-01 -0.0886 0.0761 0.863 CD4T L1
ENSG00000060688 SNRNP40 -365924 sc-eQTL 5.00e-01 -0.0821 0.122 0.863 CD8T L1
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 7.55e-01 0.0253 0.081 0.863 CD8T L1
ENSG00000134644 PUM1 -135127 sc-eQTL 9.23e-02 0.12 0.0708 0.863 CD8T L1
ENSG00000162511 LAPTM5 173090 sc-eQTL 7.62e-01 0.021 0.0692 0.863 CD8T L1
ENSG00000162517 PEF1 -714032 sc-eQTL 6.33e-01 -0.0408 0.0852 0.863 CD8T L1
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 5.91e-01 0.0437 0.0811 0.863 CD8T L1
ENSG00000287510 AL137857.1 199171 sc-eQTL 8.93e-01 -0.0138 0.102 0.863 CD8T L1
ENSG00000060688 SNRNP40 -365924 sc-eQTL 6.81e-01 -0.0437 0.106 0.858 DC L1
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 5.94e-01 -0.067 0.126 0.858 DC L1
ENSG00000134644 PUM1 -135127 sc-eQTL 2.50e-01 -0.113 0.0981 0.858 DC L1
ENSG00000162511 LAPTM5 173090 sc-eQTL 8.25e-01 -0.0155 0.0703 0.858 DC L1
ENSG00000162517 PEF1 -714032 sc-eQTL 5.10e-01 0.0752 0.114 0.858 DC L1
ENSG00000168528 SERINC2 -478701 sc-eQTL 3.84e-01 0.101 0.116 0.858 DC L1
ENSG00000284543 LINC01226 -575362 sc-eQTL 9.76e-01 -0.00234 0.0768 0.858 DC L1
ENSG00000287510 AL137857.1 199171 sc-eQTL 7.33e-01 0.038 0.111 0.858 DC L1
ENSG00000060688 SNRNP40 -365924 sc-eQTL 8.67e-01 0.014 0.0834 0.863 Mono L1
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 9.56e-01 -0.00574 0.103 0.863 Mono L1
ENSG00000134644 PUM1 -135127 sc-eQTL 3.52e-01 -0.0616 0.0661 0.863 Mono L1
ENSG00000162511 LAPTM5 173090 sc-eQTL 9.75e-01 -0.00194 0.061 0.863 Mono L1
ENSG00000162512 SDC3 22106 sc-eQTL 2.85e-03 -0.346 0.115 0.863 Mono L1
ENSG00000162517 PEF1 -714032 sc-eQTL 9.20e-01 0.00828 0.0822 0.863 Mono L1
ENSG00000168528 SERINC2 -478701 sc-eQTL 6.04e-01 -0.0653 0.126 0.863 Mono L1
ENSG00000284543 LINC01226 -575362 sc-eQTL 4.44e-01 -0.0848 0.111 0.863 Mono L1
ENSG00000287510 AL137857.1 199171 sc-eQTL 8.10e-01 -0.0233 0.0968 0.863 Mono L1
ENSG00000060688 SNRNP40 -365924 sc-eQTL 1.48e-01 -0.169 0.116 0.863 NK L1
ENSG00000121753 ADGRB2 -834029 sc-eQTL 5.57e-01 0.0591 0.1 0.863 NK L1
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 3.73e-01 0.0713 0.0798 0.863 NK L1
ENSG00000134644 PUM1 -135127 sc-eQTL 3.37e-01 0.0806 0.0837 0.863 NK L1
ENSG00000162511 LAPTM5 173090 sc-eQTL 2.78e-02 0.211 0.0954 0.863 NK L1
ENSG00000162517 PEF1 -714032 sc-eQTL 7.91e-01 0.0187 0.0705 0.863 NK L1
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 5.91e-01 0.0583 0.108 0.863 NK L1
ENSG00000287510 AL137857.1 199171 sc-eQTL 2.46e-01 -0.116 0.0998 0.863 NK L1
ENSG00000060688 SNRNP40 -365924 sc-eQTL 7.00e-01 -0.0339 0.0877 0.863 Other_T L1
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 8.19e-01 -0.0214 0.0937 0.863 Other_T L1
ENSG00000134644 PUM1 -135127 sc-eQTL 1.38e-01 0.125 0.0838 0.863 Other_T L1
ENSG00000162511 LAPTM5 173090 sc-eQTL 8.50e-01 -0.0131 0.0691 0.863 Other_T L1
ENSG00000162517 PEF1 -714032 sc-eQTL 9.28e-02 0.155 0.0916 0.863 Other_T L1
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 6.88e-01 0.0455 0.113 0.863 Other_T L1
ENSG00000287510 AL137857.1 199171 sc-eQTL 5.63e-01 -0.0681 0.118 0.863 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -365924 sc-eQTL 5.21e-01 -0.0921 0.143 0.865 B_Activated L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 6.84e-01 -0.059 0.145 0.865 B_Activated L2
ENSG00000134644 PUM1 -135127 sc-eQTL 4.91e-01 -0.0927 0.134 0.865 B_Activated L2
ENSG00000162510 MATN1 207279 sc-eQTL 2.58e-01 -0.133 0.117 0.865 B_Activated L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 2.90e-01 -0.0866 0.0817 0.865 B_Activated L2
ENSG00000162517 PEF1 -714032 sc-eQTL 6.88e-01 -0.056 0.139 0.865 B_Activated L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 2.26e-03 -0.399 0.129 0.865 B_Activated L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 1.17e-01 -0.183 0.116 0.865 B_Activated L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 1.33e-01 -0.197 0.131 0.863 B_Intermediate L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 8.61e-01 0.0192 0.109 0.863 B_Intermediate L2
ENSG00000134644 PUM1 -135127 sc-eQTL 2.16e-01 -0.128 0.103 0.863 B_Intermediate L2
ENSG00000162510 MATN1 207279 sc-eQTL 5.34e-01 -0.0668 0.107 0.863 B_Intermediate L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 8.01e-01 0.0166 0.0659 0.863 B_Intermediate L2
ENSG00000162517 PEF1 -714032 sc-eQTL 1.49e-01 -0.176 0.122 0.863 B_Intermediate L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 5.74e-01 0.0521 0.0925 0.863 B_Intermediate L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 4.54e-01 -0.0776 0.103 0.863 B_Intermediate L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 3.18e-01 0.126 0.126 0.862 B_Memory L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 7.48e-01 -0.0373 0.116 0.862 B_Memory L2
ENSG00000134644 PUM1 -135127 sc-eQTL 8.89e-01 0.0141 0.101 0.862 B_Memory L2
ENSG00000162510 MATN1 207279 sc-eQTL 4.64e-01 0.0708 0.0965 0.862 B_Memory L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 3.73e-01 0.0763 0.0855 0.862 B_Memory L2
ENSG00000162517 PEF1 -714032 sc-eQTL 7.16e-01 -0.0416 0.114 0.862 B_Memory L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 2.79e-03 -0.29 0.096 0.862 B_Memory L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 5.87e-01 0.0625 0.115 0.862 B_Memory L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 1.70e-01 -0.161 0.117 0.863 B_Naive1 L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 4.81e-01 -0.0716 0.101 0.863 B_Naive1 L2
ENSG00000134644 PUM1 -135127 sc-eQTL 8.22e-01 -0.0201 0.0896 0.863 B_Naive1 L2
ENSG00000162510 MATN1 207279 sc-eQTL 3.67e-01 0.082 0.0907 0.863 B_Naive1 L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 9.68e-01 -0.0024 0.0607 0.863 B_Naive1 L2
ENSG00000162517 PEF1 -714032 sc-eQTL 2.25e-01 0.13 0.107 0.863 B_Naive1 L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 4.30e-01 0.063 0.0797 0.863 B_Naive1 L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 7.58e-01 -0.0304 0.0985 0.863 B_Naive1 L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 9.02e-01 0.0156 0.126 0.863 B_Naive2 L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 2.89e-01 -0.11 0.103 0.863 B_Naive2 L2
ENSG00000134644 PUM1 -135127 sc-eQTL 4.09e-01 0.0838 0.101 0.863 B_Naive2 L2
ENSG00000162510 MATN1 207279 sc-eQTL 4.37e-02 -0.196 0.0964 0.863 B_Naive2 L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 4.50e-01 -0.05 0.066 0.863 B_Naive2 L2
ENSG00000162517 PEF1 -714032 sc-eQTL 8.80e-01 -0.0182 0.12 0.863 B_Naive2 L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 9.79e-01 -0.00259 0.0963 0.863 B_Naive2 L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 3.64e-01 -0.0945 0.104 0.863 B_Naive2 L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 7.34e-01 0.0428 0.126 0.861 CD4_CTL L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 5.05e-01 0.0825 0.123 0.861 CD4_CTL L2
ENSG00000134644 PUM1 -135127 sc-eQTL 4.42e-01 0.0933 0.121 0.861 CD4_CTL L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 9.38e-01 -0.00846 0.108 0.861 CD4_CTL L2
ENSG00000162517 PEF1 -714032 sc-eQTL 7.80e-01 -0.031 0.111 0.861 CD4_CTL L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 4.47e-01 0.0898 0.118 0.861 CD4_CTL L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 8.97e-01 -0.0135 0.104 0.861 CD4_CTL L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 4.91e-01 -0.0672 0.0973 0.863 CD4_Naive L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 4.96e-01 0.0588 0.0863 0.863 CD4_Naive L2
ENSG00000134644 PUM1 -135127 sc-eQTL 2.28e-02 0.156 0.0681 0.863 CD4_Naive L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 2.98e-01 -0.0768 0.0737 0.863 CD4_Naive L2
ENSG00000162517 PEF1 -714032 sc-eQTL 2.67e-01 -0.09 0.0808 0.863 CD4_Naive L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 5.14e-01 -0.049 0.0749 0.863 CD4_Naive L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 4.68e-01 -0.0625 0.086 0.863 CD4_Naive L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 5.74e-01 0.0685 0.122 0.863 CD4_TCM L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 2.64e-01 0.11 0.0979 0.863 CD4_TCM L2
ENSG00000134644 PUM1 -135127 sc-eQTL 4.63e-01 0.0638 0.0868 0.863 CD4_TCM L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 9.71e-01 -0.00263 0.0721 0.863 CD4_TCM L2
ENSG00000162517 PEF1 -714032 sc-eQTL 7.70e-01 0.0283 0.0966 0.863 CD4_TCM L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 7.46e-02 0.163 0.0908 0.863 CD4_TCM L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 1.51e-01 -0.146 0.101 0.863 CD4_TCM L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 9.03e-01 -0.0147 0.12 0.863 CD4_TEM L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 6.34e-01 0.0546 0.114 0.863 CD4_TEM L2
ENSG00000134644 PUM1 -135127 sc-eQTL 8.49e-01 -0.0181 0.0954 0.863 CD4_TEM L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 8.92e-01 0.0131 0.0965 0.863 CD4_TEM L2
ENSG00000162517 PEF1 -714032 sc-eQTL 1.33e-01 0.162 0.107 0.863 CD4_TEM L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 5.52e-01 -0.0672 0.113 0.863 CD4_TEM L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 7.45e-01 0.0361 0.111 0.863 CD4_TEM L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 1.88e-01 -0.18 0.136 0.863 CD8_CTL L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 8.82e-01 0.0155 0.105 0.863 CD8_CTL L2
ENSG00000134644 PUM1 -135127 sc-eQTL 6.80e-02 0.185 0.101 0.863 CD8_CTL L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 4.36e-01 0.0879 0.113 0.863 CD8_CTL L2
ENSG00000162517 PEF1 -714032 sc-eQTL 7.68e-01 -0.029 0.0981 0.863 CD8_CTL L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 3.10e-01 0.12 0.118 0.863 CD8_CTL L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 8.71e-01 0.0181 0.111 0.863 CD8_CTL L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 4.66e-01 0.0871 0.119 0.863 CD8_Naive L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 4.54e-01 0.0772 0.103 0.863 CD8_Naive L2
ENSG00000134644 PUM1 -135127 sc-eQTL 1.37e-01 0.123 0.0824 0.863 CD8_Naive L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 9.96e-01 0.000375 0.0794 0.863 CD8_Naive L2
ENSG00000162517 PEF1 -714032 sc-eQTL 5.13e-01 -0.0723 0.11 0.863 CD8_Naive L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 3.96e-01 -0.0841 0.099 0.863 CD8_Naive L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 8.33e-01 -0.0228 0.108 0.863 CD8_Naive L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 7.68e-01 -0.039 0.132 0.859 CD8_TCM L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 9.28e-01 0.0109 0.121 0.859 CD8_TCM L2
ENSG00000134644 PUM1 -135127 sc-eQTL 8.77e-02 0.194 0.113 0.859 CD8_TCM L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 7.87e-01 0.0323 0.119 0.859 CD8_TCM L2
ENSG00000162517 PEF1 -714032 sc-eQTL 5.57e-01 -0.0715 0.122 0.859 CD8_TCM L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 9.51e-01 0.00678 0.11 0.859 CD8_TCM L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 5.89e-02 0.21 0.11 0.859 CD8_TCM L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 8.23e-01 -0.0293 0.131 0.865 CD8_TEM L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 5.35e-02 -0.242 0.124 0.865 CD8_TEM L2
ENSG00000134644 PUM1 -135127 sc-eQTL 5.47e-01 -0.0773 0.128 0.865 CD8_TEM L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 1.48e-01 -0.174 0.12 0.865 CD8_TEM L2
ENSG00000162517 PEF1 -714032 sc-eQTL 3.77e-01 -0.101 0.113 0.865 CD8_TEM L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 5.10e-01 0.0827 0.125 0.865 CD8_TEM L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 4.77e-01 -0.0807 0.113 0.865 CD8_TEM L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 5.88e-02 -0.24 0.126 0.861 MAIT L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 8.76e-01 -0.0176 0.113 0.861 MAIT L2
ENSG00000134644 PUM1 -135127 sc-eQTL 1.25e-01 0.166 0.107 0.861 MAIT L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 7.45e-01 -0.0332 0.102 0.861 MAIT L2
ENSG00000162517 PEF1 -714032 sc-eQTL 7.51e-01 -0.0356 0.112 0.861 MAIT L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 3.70e-01 0.102 0.113 0.861 MAIT L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 6.60e-01 0.0516 0.117 0.861 MAIT L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 4.08e-01 -0.108 0.131 0.864 NK_CD56bright L2
ENSG00000121753 ADGRB2 -834029 sc-eQTL 2.09e-01 -0.129 0.102 0.864 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 6.22e-01 -0.0546 0.11 0.864 NK_CD56bright L2
ENSG00000134644 PUM1 -135127 sc-eQTL 2.22e-01 -0.141 0.116 0.864 NK_CD56bright L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 8.24e-01 0.0255 0.114 0.864 NK_CD56bright L2
ENSG00000162517 PEF1 -714032 sc-eQTL 6.66e-01 0.048 0.111 0.864 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 2.62e-01 0.129 0.115 0.864 NK_CD56bright L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 7.25e-01 -0.0399 0.113 0.864 NK_CD56bright L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 3.96e-01 -0.105 0.124 0.862 NK_CD56dim L2
ENSG00000121753 ADGRB2 -834029 sc-eQTL 6.98e-01 0.0424 0.109 0.862 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 2.57e-01 0.104 0.0914 0.862 NK_CD56dim L2
ENSG00000134644 PUM1 -135127 sc-eQTL 4.83e-01 0.0661 0.0939 0.862 NK_CD56dim L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 7.63e-02 0.177 0.0995 0.862 NK_CD56dim L2
ENSG00000162517 PEF1 -714032 sc-eQTL 8.23e-01 -0.0199 0.0892 0.862 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 6.41e-01 -0.0586 0.126 0.862 NK_CD56dim L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 8.87e-02 -0.176 0.103 0.862 NK_CD56dim L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 3.40e-01 -0.128 0.134 0.868 NK_HLA L2
ENSG00000121753 ADGRB2 -834029 sc-eQTL 6.64e-01 0.0464 0.107 0.868 NK_HLA L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 7.82e-01 -0.0332 0.12 0.868 NK_HLA L2
ENSG00000134644 PUM1 -135127 sc-eQTL 7.78e-01 -0.033 0.117 0.868 NK_HLA L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 3.63e-01 0.101 0.111 0.868 NK_HLA L2
ENSG00000162517 PEF1 -714032 sc-eQTL 5.29e-01 0.0791 0.126 0.868 NK_HLA L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 8.45e-01 -0.0232 0.119 0.868 NK_HLA L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 4.79e-01 0.0813 0.115 0.868 NK_HLA L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 6.56e-01 -0.0538 0.12 0.862 NK_cytokine L2
ENSG00000121753 ADGRB2 -834029 sc-eQTL 9.41e-01 0.00809 0.109 0.862 NK_cytokine L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 6.47e-01 0.0431 0.094 0.862 NK_cytokine L2
ENSG00000134644 PUM1 -135127 sc-eQTL 3.61e-01 0.0929 0.102 0.862 NK_cytokine L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 4.83e-01 0.0786 0.112 0.862 NK_cytokine L2
ENSG00000162517 PEF1 -714032 sc-eQTL 3.28e-01 0.0933 0.0952 0.862 NK_cytokine L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 4.33e-01 0.0931 0.119 0.862 NK_cytokine L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 7.65e-01 0.0331 0.11 0.862 NK_cytokine L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 2.68e-01 -0.156 0.14 0.863 PB L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 5.60e-01 -0.0954 0.163 0.863 PB L2
ENSG00000134644 PUM1 -135127 sc-eQTL 9.07e-01 0.0167 0.142 0.863 PB L2
ENSG00000162510 MATN1 207279 sc-eQTL 3.79e-01 -0.116 0.132 0.863 PB L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 2.63e-01 0.106 0.094 0.863 PB L2
ENSG00000162517 PEF1 -714032 sc-eQTL 2.38e-01 -0.172 0.145 0.863 PB L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 3.08e-01 -0.132 0.129 0.863 PB L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 6.54e-01 0.0617 0.138 0.863 PB L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 7.99e-01 0.0244 0.0954 0.863 Pro_T L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 5.17e-01 0.0785 0.121 0.863 Pro_T L2
ENSG00000134644 PUM1 -135127 sc-eQTL 3.66e-01 0.102 0.113 0.863 Pro_T L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 6.65e-02 -0.148 0.0804 0.863 Pro_T L2
ENSG00000162517 PEF1 -714032 sc-eQTL 4.90e-02 -0.233 0.118 0.863 Pro_T L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 6.03e-01 -0.0589 0.113 0.863 Pro_T L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 6.31e-01 -0.05 0.104 0.863 Pro_T L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 5.96e-01 0.0661 0.124 0.863 Treg L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 9.82e-01 -0.00268 0.12 0.863 Treg L2
ENSG00000134644 PUM1 -135127 sc-eQTL 5.48e-01 0.058 0.0963 0.863 Treg L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 5.52e-01 -0.0657 0.11 0.863 Treg L2
ENSG00000162517 PEF1 -714032 sc-eQTL 2.56e-01 -0.135 0.119 0.863 Treg L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 9.03e-01 0.0137 0.112 0.863 Treg L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 4.62e-01 -0.0828 0.112 0.863 Treg L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 8.85e-01 0.0182 0.126 0.866 cDC L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 4.54e-01 -0.102 0.136 0.866 cDC L2
ENSG00000134644 PUM1 -135127 sc-eQTL 7.97e-01 0.0301 0.117 0.866 cDC L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 4.55e-01 -0.0614 0.082 0.866 cDC L2
ENSG00000162517 PEF1 -714032 sc-eQTL 4.39e-01 0.0921 0.119 0.866 cDC L2
ENSG00000168528 SERINC2 -478701 sc-eQTL 5.04e-01 0.0706 0.105 0.866 cDC L2
ENSG00000284543 LINC01226 -575362 sc-eQTL 2.70e-01 -0.114 0.103 0.866 cDC L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 9.66e-01 0.00473 0.112 0.866 cDC L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 2.02e-01 -0.129 0.101 0.863 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 5.71e-01 0.0639 0.113 0.863 cMono_IL1B L2
ENSG00000134644 PUM1 -135127 sc-eQTL 4.56e-01 -0.0569 0.0763 0.863 cMono_IL1B L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 9.17e-01 0.00696 0.067 0.863 cMono_IL1B L2
ENSG00000162512 SDC3 22106 sc-eQTL 1.38e-01 -0.187 0.126 0.863 cMono_IL1B L2
ENSG00000162517 PEF1 -714032 sc-eQTL 7.74e-01 0.0297 0.103 0.863 cMono_IL1B L2
ENSG00000168528 SERINC2 -478701 sc-eQTL 6.40e-01 -0.0598 0.128 0.863 cMono_IL1B L2
ENSG00000284543 LINC01226 -575362 sc-eQTL 9.22e-01 -0.011 0.113 0.863 cMono_IL1B L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 7.00e-01 0.0407 0.105 0.863 cMono_IL1B L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 3.24e-01 0.104 0.105 0.863 cMono_S100A L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 9.87e-01 0.00208 0.125 0.863 cMono_S100A L2
ENSG00000134644 PUM1 -135127 sc-eQTL 6.68e-01 0.0387 0.09 0.863 cMono_S100A L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 6.31e-01 0.0332 0.0692 0.863 cMono_S100A L2
ENSG00000162512 SDC3 22106 sc-eQTL 5.84e-02 -0.226 0.119 0.863 cMono_S100A L2
ENSG00000162517 PEF1 -714032 sc-eQTL 5.69e-01 -0.0615 0.108 0.863 cMono_S100A L2
ENSG00000168528 SERINC2 -478701 sc-eQTL 3.60e-01 -0.116 0.126 0.863 cMono_S100A L2
ENSG00000284543 LINC01226 -575362 sc-eQTL 1.05e-01 -0.166 0.102 0.863 cMono_S100A L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 8.82e-01 -0.0153 0.103 0.863 cMono_S100A L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 6.14e-01 -0.076 0.15 0.855 gdT L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 6.13e-01 -0.0653 0.129 0.855 gdT L2
ENSG00000134644 PUM1 -135127 sc-eQTL 2.93e-01 -0.14 0.132 0.855 gdT L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 8.52e-01 -0.027 0.145 0.855 gdT L2
ENSG00000162517 PEF1 -714032 sc-eQTL 7.30e-02 0.236 0.131 0.855 gdT L2
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 9.41e-01 0.00984 0.133 0.855 gdT L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 9.19e-01 0.0132 0.129 0.855 gdT L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 8.50e-01 0.0222 0.117 0.869 intMono L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 1.40e-01 -0.185 0.125 0.869 intMono L2
ENSG00000134644 PUM1 -135127 sc-eQTL 7.96e-01 -0.0276 0.106 0.869 intMono L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 1.97e-01 0.108 0.0832 0.869 intMono L2
ENSG00000162512 SDC3 22106 sc-eQTL 3.83e-02 -0.236 0.113 0.869 intMono L2
ENSG00000162517 PEF1 -714032 sc-eQTL 7.77e-01 0.0341 0.12 0.869 intMono L2
ENSG00000168528 SERINC2 -478701 sc-eQTL 6.75e-01 -0.0502 0.12 0.869 intMono L2
ENSG00000284543 LINC01226 -575362 sc-eQTL 9.54e-01 -0.00649 0.113 0.869 intMono L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 8.14e-01 -0.0268 0.114 0.869 intMono L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 7.49e-01 -0.0348 0.109 0.867 ncMono L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 8.11e-01 -0.0278 0.116 0.867 ncMono L2
ENSG00000134644 PUM1 -135127 sc-eQTL 1.33e-01 -0.142 0.0942 0.867 ncMono L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 7.65e-01 0.0258 0.086 0.867 ncMono L2
ENSG00000162512 SDC3 22106 sc-eQTL 5.72e-02 -0.183 0.0956 0.867 ncMono L2
ENSG00000162517 PEF1 -714032 sc-eQTL 8.51e-01 -0.0208 0.111 0.867 ncMono L2
ENSG00000168528 SERINC2 -478701 sc-eQTL 6.75e-01 -0.0442 0.105 0.867 ncMono L2
ENSG00000284543 LINC01226 -575362 sc-eQTL 8.42e-01 0.021 0.105 0.867 ncMono L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 3.26e-01 -0.107 0.109 0.867 ncMono L2
ENSG00000060688 SNRNP40 -365924 sc-eQTL 4.56e-01 -0.0933 0.125 0.853 pDC L2
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 7.88e-01 -0.0369 0.137 0.853 pDC L2
ENSG00000134644 PUM1 -135127 sc-eQTL 8.52e-01 0.0213 0.114 0.853 pDC L2
ENSG00000162511 LAPTM5 173090 sc-eQTL 2.45e-01 0.123 0.105 0.853 pDC L2
ENSG00000162517 PEF1 -714032 sc-eQTL 3.95e-01 0.117 0.137 0.853 pDC L2
ENSG00000168528 SERINC2 -478701 sc-eQTL 3.59e-01 0.118 0.128 0.853 pDC L2
ENSG00000284543 LINC01226 -575362 sc-eQTL 1.54e-01 0.142 0.0989 0.853 pDC L2
ENSG00000287510 AL137857.1 199171 sc-eQTL 6.82e-01 0.048 0.117 0.853 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -365924 sc-eQTL 3.55e-01 -0.118 0.127 0.863 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 5.58e-01 -0.0624 0.106 0.863 B_Memory LOneK1K
ENSG00000134644 PUM1 -135127 sc-eQTL 2.07e-01 -0.119 0.0939 0.863 B_Memory LOneK1K
ENSG00000162510 MATN1 207279 sc-eQTL 7.60e-01 0.0329 0.107 0.863 B_Memory LOneK1K
ENSG00000162511 LAPTM5 173090 sc-eQTL 8.46e-01 0.0131 0.0675 0.863 B_Memory LOneK1K
ENSG00000162517 PEF1 -714032 sc-eQTL 4.94e-01 -0.0764 0.112 0.863 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 4.44e-02 -0.179 0.0884 0.863 B_Memory LOneK1K
ENSG00000287510 AL137857.1 199171 sc-eQTL 5.87e-02 -0.183 0.0965 0.863 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -365924 sc-eQTL 6.45e-01 -0.0526 0.114 0.863 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 2.21e-01 -0.111 0.09 0.863 B_Naive LOneK1K
ENSG00000134644 PUM1 -135127 sc-eQTL 9.66e-01 -0.00362 0.0854 0.863 B_Naive LOneK1K
ENSG00000162510 MATN1 207279 sc-eQTL 9.37e-01 0.00655 0.0823 0.863 B_Naive LOneK1K
ENSG00000162511 LAPTM5 173090 sc-eQTL 7.83e-01 -0.016 0.0579 0.863 B_Naive LOneK1K
ENSG00000162517 PEF1 -714032 sc-eQTL 2.41e-01 0.124 0.105 0.863 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 3.79e-01 0.0658 0.0747 0.863 B_Naive LOneK1K
ENSG00000287510 AL137857.1 199171 sc-eQTL 8.53e-01 -0.0165 0.0888 0.863 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -365924 sc-eQTL 9.82e-01 -0.00215 0.0961 0.863 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 5.73e-01 0.0615 0.109 0.863 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -135127 sc-eQTL 7.70e-01 -0.0203 0.0694 0.863 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 173090 sc-eQTL 8.30e-01 0.0131 0.061 0.863 CD14_Mono LOneK1K
ENSG00000162512 SDC3 22106 sc-eQTL 4.16e-02 -0.253 0.123 0.863 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -714032 sc-eQTL 9.57e-01 0.00477 0.0875 0.863 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -478701 sc-eQTL 4.75e-01 -0.0915 0.128 0.863 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -575362 sc-eQTL 6.90e-01 -0.0419 0.105 0.863 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 199171 sc-eQTL 7.52e-01 0.031 0.0983 0.863 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -365924 sc-eQTL 6.96e-01 0.0406 0.104 0.862 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 2.28e-01 -0.137 0.113 0.862 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -135127 sc-eQTL 1.06e-01 -0.15 0.0925 0.862 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 173090 sc-eQTL 6.46e-01 0.0343 0.0745 0.862 CD16_Mono LOneK1K
ENSG00000162512 SDC3 22106 sc-eQTL 1.07e-02 -0.276 0.107 0.862 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -714032 sc-eQTL 7.86e-01 0.0269 0.0988 0.862 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -478701 sc-eQTL 9.62e-01 -0.00537 0.113 0.862 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -575362 sc-eQTL 9.97e-01 -0.000359 0.107 0.862 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 199171 sc-eQTL 2.45e-01 -0.125 0.107 0.862 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -365924 sc-eQTL 2.76e-01 -0.128 0.117 0.862 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -834029 sc-eQTL 4.85e-01 0.0697 0.0996 0.862 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -366118 sc-eQTL 3.29e-01 0.0781 0.0798 0.862 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -135127 sc-eQTL 2.02e-01 0.112 0.0873 0.862 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 173090 sc-eQTL 4.73e-02 0.194 0.097 0.862 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -714032 sc-eQTL 7.14e-01 0.0273 0.0744 0.862 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 212360 sc-eQTL 6.70e-01 0.0482 0.113 0.862 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 199171 sc-eQTL 3.15e-01 -0.098 0.0973 0.862 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000060688 SNRNP40 -365924 eQTL 0.00709 0.0661 0.0245 0.00122 0.0 0.128
ENSG00000121766 ZCCHC17 -366118 eQTL 2.07e-04 0.0956 0.0257 0.0 0.0 0.128
ENSG00000162512 SDC3 22106 eQTL 1.33e-11 -0.24 0.035 0.00184 0.00898 0.128
ENSG00000168528 SERINC2 -478701 eQTL 0.000832 -0.187 0.0559 0.0 0.0 0.128
ENSG00000237329 AL356320.2 -105870 eQTL 0.0111 0.129 0.0506 0.0014 0.0 0.128

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121766 ZCCHC17 -366118 1.34e-06 1.36e-06 3.04e-07 1.26e-06 3.48e-07 6.28e-07 1.49e-06 3.62e-07 1.47e-06 5.9e-07 2.07e-06 9.21e-07 2.45e-06 4.46e-07 5.06e-07 9.51e-07 9.15e-07 9.1e-07 8.19e-07 6.19e-07 6.66e-07 1.82e-06 8.98e-07 6.23e-07 2.44e-06 4.31e-07 1.02e-06 8.46e-07 1.61e-06 1.31e-06 7.8e-07 2.57e-07 1.89e-07 6.16e-07 5.67e-07 4.74e-07 5.76e-07 2.42e-07 2.56e-07 2.97e-07 2.93e-07 1.63e-06 2.32e-07 1.66e-07 1.69e-07 3.04e-07 2.6e-07 4.91e-08 9.59e-08
ENSG00000162512 SDC3 22106 2.62e-05 2.73e-05 4.87e-06 1.45e-05 4.53e-06 1.17e-05 3.78e-05 3.82e-06 2.5e-05 1.23e-05 3.16e-05 1.46e-05 3.91e-05 1.23e-05 6.21e-06 1.54e-05 1.35e-05 2.1e-05 6.52e-06 5.66e-06 1.19e-05 2.59e-05 2.57e-05 7.65e-06 3.73e-05 6.4e-06 1.09e-05 1.11e-05 2.73e-05 2.05e-05 1.59e-05 1.6e-06 2.29e-06 6.43e-06 1.04e-05 4.81e-06 2.77e-06 2.98e-06 3.75e-06 3.11e-06 1.67e-06 3.18e-05 3.07e-06 2.85e-07 2.07e-06 3.29e-06 3.88e-06 1.48e-06 1.4e-06
ENSG00000237329 AL356320.2 -105870 6.95e-06 9.44e-06 8.44e-07 5.06e-06 1.76e-06 3.53e-06 9.53e-06 1.44e-06 6.66e-06 4.1e-06 1.04e-05 5.03e-06 1.12e-05 3.92e-06 1.63e-06 5.79e-06 3.76e-06 4.08e-06 1.87e-06 2.51e-06 3.25e-06 7.64e-06 5.58e-06 2.28e-06 1.23e-05 2.19e-06 4.38e-06 3.29e-06 7.52e-06 7.05e-06 4.17e-06 8.78e-07 8.41e-07 2.79e-06 3.7e-06 1.55e-06 1.35e-06 1.08e-06 9.67e-07 1e-06 8.2e-07 8.73e-06 1.29e-06 1.95e-07 7.75e-07 1.68e-06 1.23e-06 7.14e-07 5.97e-07