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Genes within 1Mb (chr1:28650338:G:T):

View on , UCSC , GTEx , gnomAD

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116350 SRSF4 -531562 eQTL 7.13e-03 0.263 0.0973 0.0 0.0 0.00393
ENSG00000130768 SMPDL3B 715338 eQTL 2.30e-02 0.503 0.221 0.0 0.0 0.00393
ENSG00000158156 XKR8 690876 eQTL 2.54e-02 -0.475 0.212 0.0 0.0 0.00393
ENSG00000180198 RCC1 144395 eQTL 4.69e-03 0.523 0.184 0.0 0.0 0.00393
ENSG00000225886 AL445490.1 980870 eQTL 1.39e-01 0.27 0.182 0.00116 0.0 0.00393
ENSG00000233975 LINC02574 987616 eQTL 8.25e-02 -0.426 0.245 0.0015 0.0 0.00393
ENSG00000242125 SNHG3 144358 eQTL 4.84e-02 -0.198 0.1 0.0015 0.0 0.00393
ENSG00000274266 SNORA73A 142972 eQTL 3.15e-02 -0.821 0.381 0.00231 0.0 0.00393
ENSG00000279443 AL513497.1 105878 eQTL 1.23e-02 0.833 0.332 0.0035 0.0 0.00393

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina